RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 DDX21Q9NR30 783 aaKnown RBP eCLIP14.01□□□□□ -0.17
HLA-DQA1-202ENST00000374949 TRAF5O00463 557 aa14□□□□□ -0.17
HLA-DQA1-202ENST00000374949 CHL1O00533 1208 aa14□□□□□ -0.17
HLA-DQA1-202ENST00000374949 GRM1Q13255 1194 aa14□□□□□ -0.17
HLA-DQA1-202ENST00000374949 RBM17Q96I25 401 aaKnown RBP14□□□□□ -0.17
HLA-DQA1-202ENST00000374949 PPIP5K2O43314 1243 aa13.99□□□□□ -0.17
HLA-DQA1-202ENST00000374949 AOC3Q16853 763 aa13.99□□□□□ -0.17
HLA-DQA1-202ENST00000374949 NIM1KQ8IY84 436 aa13.99□□□□□ -0.17
HLA-DQA1-202ENST00000374949 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
HLA-DQA1-202ENST00000374949 CRAMP1Q96RY5 1269 aa13.99□□□□□ -0.17
HLA-DQA1-202ENST00000374949 MBIPQ9NS73 344 aa13.99□□□□□ -0.17
HLA-DQA1-202ENST00000374949 BABAM1Q9NWV8 329 aa13.99□□□□□ -0.17
HLA-DQA1-202ENST00000374949 RRP1P56182 461 aaKnown RBP13.98□□□□□ -0.17
HLA-DQA1-202ENST00000374949 MAP2K1Q02750 393 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQA1-202ENST00000374949 CYP4F22Q6NT55 531 aa13.98□□□□□ -0.17
HLA-DQA1-202ENST00000374949 GIGYF2Q6Y7W6 1299 aaKnown RBP13.98□□□□□ -0.17
HLA-DQA1-202ENST00000374949 CAPNS2Q96L46 248 aa13.98□□□□□ -0.17
HLA-DQA1-202ENST00000374949 ABCC4O15439 1325 aa13.97□□□□□ -0.17
HLA-DQA1-202ENST00000374949 ERBB4Q15303 1308 aa13.97□□□□□ -0.17
HLA-DQA1-202ENST00000374949 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-202ENST00000374949 ABHD8Q96I13 439 aa13.97□□□□□ -0.17
HLA-DQA1-202ENST00000374949 TAF1P21675 1872 aa13.97□□□□□ -0.17
HLA-DQA1-202ENST00000374949 ANXA1P04083 346 aa13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 RARSP54136 660 aaKnown RBP13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 PROSER3Q2NL68 480 aa13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 GRIPAP1Q4V328 841 aa13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 USP50Q70EL3 339 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 LRP10Q7Z4F1 713 aa13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 PPP1R42Q7Z4L9 355 aa13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 TSPYL4Q9UJ04 414 aa13.96□□□□□ -0.17
HLA-DQA1-202ENST00000374949 DUOX1Q9NRD9 1551 aa13.96□□□□□ -0.18
HLA-DQA1-202ENST00000374949 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 IRX6P78412 446 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 PARP10Q53GL7 1025 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 CST9Q5W186 159 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ZNF428Q96B54 188 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 NLRP3Q96P20 1036 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 TSKSQ9UJT2 592 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ATP6V0A2Q9Y487 856 aa13.95□□□□□ -0.18
HLA-DQA1-202ENST00000374949 VAMP4O75379 141 aa13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 BCAR3O75815 825 aa13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 EIF2S2P20042 333 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ECE1P42892 770 aa13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 PDIA6Q15084 440 aa13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 DDX60Q8IY21 1712 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 TMX4Q9H1E5 349 aaPredicted RBP13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ADARB2Q9NS39 739 aaKnown RBP13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 TLL2Q9Y6L7 1015 aa13.94□□□□□ -0.18
HLA-DQA1-202ENST00000374949 AOC2O75106 756 aa13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 CXCL9Q07325 125 aa13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 GPR101Q96P66 508 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 BEGAINQ9BUH8 593 aa13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 GLIS2Q9BZE0 524 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ZNRF3Q9ULT6 936 aa13.93□□□□□ -0.18
HLA-DQA1-202ENST00000374949 PLIN1O60240 522 aa13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 CELF2O95319 508 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 HCLS1P14317 486 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 TWISTNBQ3B726 338 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ALDH1L2Q3SY69 923 aa13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 TSPYL6Q8N831 410 aa13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 SUPT20HQ8NEM7 779 aa13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 NECTIN2Q92692 538 aa13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-202ENST00000374949 COL4A1P02462 1669 aa13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 SHTN1A0MZ66 631 aa13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ELL2O00472 640 aaPredicted RBP13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 RAD17O75943 681 aa13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 AIMP1Q12904 312 aaKnown RBP13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 NLRP10Q86W26 655 aa13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 TRPM4Q8TD43 1214 aa13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 ZNF408Q9H9D4 720 aa13.91□□□□□ -0.18
HLA-DQA1-202ENST00000374949 CDHR2Q9BYE9 1310 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 CCDC85CA6NKD9 419 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 KIAA2012Q0VF49 1180 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 SAPCD2Q86UD0 394 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 MPNDQ8N594 471 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 XAGE3Q8WTP9 111 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 SSH1Q8WYL5 1049 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 VPS33BQ9H267 617 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 CASP8AP2Q9UKL3 1982 aa13.9□□□□□ -0.18
HLA-DQA1-202ENST00000374949 HIRAP54198 1017 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 GRAPQ13588 217 aa13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 DDX46Q7L014 1031 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 GRAPLQ8TC17 118 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 FRAT1Q92837 279 aaPredicted RBP13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 BCL2L13Q9BXK5 485 aa13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
HLA-DQA1-202ENST00000374949 YDJCA8MPS7 323 aa13.88□□□□□ -0.19
HLA-DQA1-202ENST00000374949 BBOX1O75936 387 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms