RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 BOLA2Q9H3K6 86 aa20.26■□□□□ 0.83
PHF1-202ENST00000374516 SGSM2O43147 1006 aa20.26■□□□□ 0.83
PHF1-202ENST00000374516 MCCP23508 829 aa20.26■□□□□ 0.83
PHF1-202ENST00000374516 SASS6Q6UVJ0 657 aa20.26■□□□□ 0.83
PHF1-202ENST00000374516 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
PHF1-202ENST00000374516 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
PHF1-202ENST00000374516 COL22A1Q8NFW1 1626 aaPredicted RBP20.26■□□□□ 0.83
PHF1-202ENST00000374516 BCL9O00512 1426 aa20.25■□□□□ 0.83
PHF1-202ENST00000374516 SYAP1Q96A49 352 aaPredicted RBP20.25■□□□□ 0.83
PHF1-202ENST00000374516 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
PHF1-202ENST00000374516 CCDC9Q9Y3X0 531 aaKnown RBP20.25■□□□□ 0.83
PHF1-202ENST00000374516 ANAPC15P60006 121 aa20.24■□□□□ 0.83
PHF1-202ENST00000374516 MTERF4Q7Z6M4 381 aaKnown RBP20.24■□□□□ 0.83
PHF1-202ENST00000374516 SPATA31A1Q5TZJ5 1347 aa20.24■□□□□ 0.83
PHF1-202ENST00000374516 COL15A1P39059 1388 aa20.23■□□□□ 0.83
PHF1-202ENST00000374516 PTMAP06454 111 aaKnown RBP20.23■□□□□ 0.83
PHF1-202ENST00000374516 TCIRG1Q13488 830 aa20.23■□□□□ 0.83
PHF1-202ENST00000374516 DDB1Q16531 1140 aa20.23■□□□□ 0.83
PHF1-202ENST00000374516 EVI5LQ96CN4 794 aa20.23■□□□□ 0.83
PHF1-202ENST00000374516 ACSBG1Q96GR2 724 aa20.23■□□□□ 0.83
PHF1-202ENST00000374516 ITGB4P16144 1822 aa20.23■□□□□ 0.83
PHF1-202ENST00000374516 TNNI3KQ59H18 835 aa20.22■□□□□ 0.83
PHF1-202ENST00000374516 KIF6Q6ZMV9 814 aa20.22■□□□□ 0.83
PHF1-202ENST00000374516 FPGT-TNNI3KV9GXZ4 949 aa20.22■□□□□ 0.83
PHF1-202ENST00000374516 PHLPP1O60346 1717 aa20.22■□□□□ 0.83
PHF1-202ENST00000374516 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
PHF1-202ENST00000374516 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
PHF1-202ENST00000374516 DBNLQ9UJU6 430 aaKnown RBP20.22■□□□□ 0.83
PHF1-202ENST00000374516 NUP188Q5SRE5 1749 aa20.21■□□□□ 0.83
PHF1-202ENST00000374516 TOM1O60784 492 aa20.21■□□□□ 0.83
PHF1-202ENST00000374516 CYP19A1P11511 503 aaPredicted RBP20.21■□□□□ 0.83
PHF1-202ENST00000374516 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
PHF1-202ENST00000374516 ZNF594Q96JF6 807 aaPredicted RBP20.21■□□□□ 0.83
PHF1-202ENST00000374516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.21■□□□□ 0.831e-6■□□□□ 10.5
PHF1-202ENST00000374516 HSPA4P34932 840 aa20.21■□□□□ 0.83
PHF1-202ENST00000374516 KIAA2012Q0VF49 1180 aa20.21■□□□□ 0.83
PHF1-202ENST00000374516 HLFQ16534 295 aa20.21■□□□□ 0.83
PHF1-202ENST00000374516 EDC3Q96F86 508 aaKnown RBP20.21■□□□□ 0.83
PHF1-202ENST00000374516 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
PHF1-202ENST00000374516 LSG1Q9H089 658 aaKnown RBP20.21■□□□□ 0.83
PHF1-202ENST00000374516 NDUFB9Q9Y6M9 179 aa20.21■□□□□ 0.83
PHF1-202ENST00000374516 GADD45BO75293 160 aaPredicted RBP20.2■□□□□ 0.82
PHF1-202ENST00000374516 PHF14O94880 888 aa20.2■□□□□ 0.82
PHF1-202ENST00000374516 CCDC85AQ96PX6 553 aaPredicted RBP20.2■□□□□ 0.82
PHF1-202ENST00000374516 ZBTB1Q9Y2K1 713 aa20.2■□□□□ 0.82
PHF1-202ENST00000374516 GPTP24298 496 aa20.2■□□□□ 0.82
PHF1-202ENST00000374516 USP48Q86UV5 1035 aa20.2■□□□□ 0.82
PHF1-202ENST00000374516 IL17RAQ96F46 866 aa20.2■□□□□ 0.82
PHF1-202ENST00000374516 RAD50Q92878 1312 aa20.19■□□□□ 0.82
PHF1-202ENST00000374516 FOXD4L6Q3SYB3 417 aaPredicted RBP20.19■□□□□ 0.82
PHF1-202ENST00000374516 FOXD4L3Q6VB84 417 aaPredicted RBP20.19■□□□□ 0.82
PHF1-202ENST00000374516 FAM227BQ96M60 508 aa20.19■□□□□ 0.82
PHF1-202ENST00000374516 DBNDD2Q9BQY9 259 aa20.19■□□□□ 0.82
PHF1-202ENST00000374516 GDPD2Q9HCC8 539 aa20.19■□□□□ 0.82
PHF1-202ENST00000374516 SYNE4Q8N205 404 aa20.19■□□□□ 0.82
PHF1-202ENST00000374516 MARCH10Q8NA82 808 aaPredicted RBP20.19■□□□□ 0.82
PHF1-202ENST00000374516 PLCH1Q4KWH8 1693 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 PTH1RQ03431 593 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 UVSSAQ2YD98 709 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 ATG9AQ7Z3C6 839 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 LRRC24Q50LG9 513 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 RUFY2Q8WXA3 655 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 FSD1Q9BTV5 496 aa20.18■□□□□ 0.82
PHF1-202ENST00000374516 CDCA7Q9BWT1 371 aaPredicted RBP20.18■□□□□ 0.82
PHF1-202ENST00000374516 MAP3K15Q6ZN16 1313 aa20.17■□□□□ 0.82
PHF1-202ENST00000374516 RASEFQ8IZ41 740 aa20.17■□□□□ 0.82
PHF1-202ENST00000374516 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
PHF1-202ENST00000374516 THRAP3Q9Y2W1 955 aaKnown RBP20.17■□□□□ 0.82
PHF1-202ENST00000374516 WDR33Q9C0J8 1336 aaKnown RBP20.17■□□□□ 0.82
PHF1-202ENST00000374516 TIMM10P62072 90 aa20.16■□□□□ 0.82
PHF1-202ENST00000374516 NMIQ13287 307 aaPredicted RBP20.16■□□□□ 0.82
PHF1-202ENST00000374516 GIGYF2Q6Y7W6 1299 aaKnown RBP20.16■□□□□ 0.82
PHF1-202ENST00000374516 NEUROD6Q96NK8 337 aa20.16■□□□□ 0.82
PHF1-202ENST00000374516 PUS3Q9BZE2 481 aaKnown RBP20.16■□□□□ 0.82
PHF1-202ENST00000374516 SPATA31A5Q5VU36 1347 aa20.16■□□□□ 0.82
PHF1-202ENST00000374516 SPATA31A7Q8IWB4 1347 aa20.16■□□□□ 0.82
PHF1-202ENST00000374516 TJP1Q07157 1748 aa20.16■□□□□ 0.82
PHF1-202ENST00000374516 TRIM28Q13263 835 aaKnown RBP20.15■□□□□ 0.82
PHF1-202ENST00000374516 SNX14Q9Y5W7 946 aa20.15■□□□□ 0.82
PHF1-202ENST00000374516 UBAP1LF5GYI3 381 aa20.15■□□□□ 0.82
PHF1-202ENST00000374516 EPB41L2O43491 1005 aaKnown RBP20.15■□□□□ 0.82
PHF1-202ENST00000374516 ATP5JP18859 108 aa20.15■□□□□ 0.82
PHF1-202ENST00000374516 PRDM4Q9UKN5 801 aa20.15■□□□□ 0.82
PHF1-202ENST00000374516 DNTTIP2Q5QJE6 756 aaKnown RBP20.14■□□□□ 0.82
PHF1-202ENST00000374516 MYRIPQ8NFW9 859 aa20.14■□□□□ 0.82
PHF1-202ENST00000374516 DNAJC2Q99543 621 aaKnown RBP20.14■□□□□ 0.82
PHF1-202ENST00000374516 A0A0D9SFI3 127 aa20.14■□□□□ 0.81
PHF1-202ENST00000374516 CCDC57Q2TAC2 916 aa20.14■□□□□ 0.81
PHF1-202ENST00000374516 ZBTB38Q8NAP3 1195 aaPredicted RBP20.14■□□□□ 0.81
PHF1-202ENST00000374516 EYA2O00167 538 aa20.13■□□□□ 0.81
PHF1-202ENST00000374516 PCCAP05165 728 aaPredicted RBP20.13■□□□□ 0.81
PHF1-202ENST00000374516 PIBF1Q8WXW3 757 aa20.13■□□□□ 0.81
PHF1-202ENST00000374516 ZNF830Q96NB3 372 aaPredicted RBP20.13■□□□□ 0.81
PHF1-202ENST00000374516 CHGBP05060 677 aa20.13■□□□□ 0.81
PHF1-202ENST00000374516 IL15P40933 162 aaPredicted RBP20.13■□□□□ 0.81
PHF1-202ENST00000374516 NLRP10Q86W26 655 aa20.13■□□□□ 0.81
PHF1-202ENST00000374516 MPNDQ8N594 471 aa20.13■□□□□ 0.81
PHF1-202ENST00000374516 TMEM87AQ8NBN3 555 aa20.13■□□□□ 0.81
PHF1-202ENST00000374516 ATP6V1AP38606 617 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms