RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CCDC171Q6TFL3 1326 aa16.72■□□□□ 0.27
HMGCL-203ENST00000374490 BCL9O00512 1426 aa16.72■□□□□ 0.27
HMGCL-203ENST00000374490 NUP188Q5SRE5 1749 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 PRAMEF22A3QJZ6 481 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 EXOC5O00471 708 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
HMGCL-203ENST00000374490 GCKRQ14397 625 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 CSPP1Q1MSJ5 1256 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 RASEFQ8IZ41 740 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 KAZALD1Q96I82 304 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 ZSWIM6Q9HCJ5 1215 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 TMEM63CQ9P1W3 806 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 CYP46A1Q9Y6A2 500 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 RFX7Q2KHR2 1363 aa16.71■□□□□ 0.27
HMGCL-203ENST00000374490 SASH1O94885 1247 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 IGKV5-2P06315 115 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 PSMA5P28066 241 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 AIMP1Q12904 312 aaKnown RBP16.7■□□□□ 0.26
HMGCL-203ENST00000374490 FMNL2Q96PY5 1086 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 RBSNQ9H1K0 784 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 ZSCAN22P10073 491 aaPredicted RBP16.7■□□□□ 0.26
HMGCL-203ENST00000374490 CASTP20810 708 aaKnown RBP16.7■□□□□ 0.26
HMGCL-203ENST00000374490 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
HMGCL-203ENST00000374490 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 FOXD4L5Q5VV16 416 aaPredicted RBP16.7■□□□□ 0.26
HMGCL-203ENST00000374490 RUFY3Q7L099 469 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 XAGE3Q8WTP9 111 aa16.7■□□□□ 0.26
HMGCL-203ENST00000374490 FOXD4L4Q8WXT5 416 aaPredicted RBP16.7■□□□□ 0.26
HMGCL-203ENST00000374490 RBM27Q9P2N5 1060 aaKnown RBP16.7■□□□□ 0.26
HMGCL-203ENST00000374490 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
HMGCL-203ENST00000374490 YY1P25490 414 aa16.69■□□□□ 0.26
HMGCL-203ENST00000374490 NECTIN1Q15223 517 aa16.69■□□□□ 0.26
HMGCL-203ENST00000374490 PRPF40BQ6NWY9 871 aaKnown RBP16.69■□□□□ 0.26
HMGCL-203ENST00000374490 PTF1AQ7RTS3 328 aa16.69■□□□□ 0.26
HMGCL-203ENST00000374490 ZSCAN30Q86W11 494 aa16.69■□□□□ 0.26
HMGCL-203ENST00000374490 EAF2Q96CJ1 260 aaPredicted RBP16.69■□□□□ 0.26
HMGCL-203ENST00000374490 JAKMIP1Q96N16 626 aaKnown RBP16.69■□□□□ 0.26
HMGCL-203ENST00000374490 ANO8Q9HCE9 1232 aaPredicted RBP16.69■□□□□ 0.26
HMGCL-203ENST00000374490 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
HMGCL-203ENST00000374490 PAPPAQ13219 1627 aa16.68■□□□□ 0.26
HMGCL-203ENST00000374490 STX6O43752 255 aa16.68■□□□□ 0.26
HMGCL-203ENST00000374490 LETM1O95202 739 aaPredicted RBP16.68■□□□□ 0.26
HMGCL-203ENST00000374490 ZNF496Q96IT1 587 aaPredicted RBP16.68■□□□□ 0.26
HMGCL-203ENST00000374490 PDLIM2Q96JY6 352 aa16.68■□□□□ 0.26
HMGCL-203ENST00000374490 MYD88Q99836 296 aa16.68■□□□□ 0.26
HMGCL-203ENST00000374490 TOGARAM1Q9Y4F4 1720 aa16.68■□□□□ 0.26
HMGCL-203ENST00000374490 PTH1RQ03431 593 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 ANKRD1Q15327 319 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 ANKRD13DQ6ZTN6 518 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 COPS6Q7L5N1 327 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 ALDH8A1Q9H2A2 487 aaPredicted RBP16.67■□□□□ 0.26
HMGCL-203ENST00000374490 TSPY26PQ9H489 355 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 HMG20BQ9P0W2 317 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 RBM8AQ9Y5S9 174 aaKnown RBP16.67■□□□□ 0.26
HMGCL-203ENST00000374490 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 SYCE3A1L190 88 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 NMIQ13287 307 aaPredicted RBP16.67■□□□□ 0.26
HMGCL-203ENST00000374490 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
HMGCL-203ENST00000374490 MED23Q9ULK4 1368 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 F13A1P00488 732 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 MYL6BP14649 208 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 KCNJ4P48050 445 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 TXNRD1Q16881 649 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 RABL6Q3YEC7 729 aaPredicted RBP16.66■□□□□ 0.26
HMGCL-203ENST00000374490 CREB3L3Q68CJ9 461 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 USP48Q86UV5 1035 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 TICAM2Q86XR7 235 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 PROM2Q8N271 834 aa16.66■□□□□ 0.26
HMGCL-203ENST00000374490 SYT1P21579 422 aa16.65■□□□□ 0.26
HMGCL-203ENST00000374490 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
HMGCL-203ENST00000374490 FAM184AQ8NB25 1140 aa16.65■□□□□ 0.26
HMGCL-203ENST00000374490 CCDC8Q9H0W5 538 aaPredicted RBP16.65■□□□□ 0.26
HMGCL-203ENST00000374490 TMOD3Q9NYL9 352 aa16.65■□□□□ 0.26
HMGCL-203ENST00000374490 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
HMGCL-203ENST00000374490 ZBTB7AO95365 584 aa16.64■□□□□ 0.25
HMGCL-203ENST00000374490 ATP5JP18859 108 aa16.64■□□□□ 0.25
HMGCL-203ENST00000374490 MSNP26038 577 aaKnown RBP16.64■□□□□ 0.25
HMGCL-203ENST00000374490 UBE2HP62256 183 aa16.64■□□□□ 0.25
HMGCL-203ENST00000374490 TSGA10IPQ3SY00 556 aa16.64■□□□□ 0.25
HMGCL-203ENST00000374490 CCDC183Q5T5S1 534 aa16.64■□□□□ 0.25
HMGCL-203ENST00000374490 SLC27A2O14975 620 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 MCM5P33992 734 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 KRT32Q14532 448 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 PLBD2Q8NHP8 589 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
HMGCL-203ENST00000374490 RGPD3A6NKT7 1758 aaPredicted RBP16.63■□□□□ 0.25
HMGCL-203ENST00000374490 RGPD4Q7Z3J3 1758 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 PDCP20941 246 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
HMGCL-203ENST00000374490 CCDC83Q8IWF9 413 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 CHAMP1Q96JM3 812 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 ITGB4P16144 1822 aa16.63■□□□□ 0.25
HMGCL-203ENST00000374490 KCPQ6ZWJ8 1503 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms