RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 THOC2Q8NI27 1593 aaKnown RBP11.74□□□□□ -0.53
CD28-202ENST00000374481 PPFIA4O75335 1185 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 ERCC3P19447 782 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 RABGGTAQ92696 567 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 EPRSP07814 1512 aaKnown RBP11.74□□□□□ -0.53
CD28-202ENST00000374481 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
CD28-202ENST00000374481 STIM1Q13586 685 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 CFAP70Q5T0N1 1121 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 RPUSD2Q8IZ73 545 aaKnown RBP11.74□□□□□ -0.53
CD28-202ENST00000374481 NUCKS1Q9H1E3 243 aaKnown RBP11.74□□□□□ -0.53
CD28-202ENST00000374481 DCTPP1Q9H773 170 aa11.74□□□□□ -0.53
CD28-202ENST00000374481 CCDC141Q6ZP82 1450 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 SPECC1Q5M775 1068 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 NFXL1Q6ZNB6 911 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 NUP88Q99567 741 aaPredicted RBP11.73□□□□□ -0.53
CD28-202ENST00000374481 ORC3Q9UBD5 711 aaPredicted RBP11.73□□□□□ -0.53
CD28-202ENST00000374481 DAPK1P53355 1430 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 HLTFQ14527 1009 aaKnown RBP eCLIP11.73□□□□□ -0.53
CD28-202ENST00000374481 ARFGAP2Q8N6H7 521 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
CD28-202ENST00000374481 BAIAP2L1Q9UHR4 511 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 IFFO1Q0D2I5 559 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 CEP120Q8N960 986 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 MRPS27Q92552 414 aaKnown RBP11.73□□□□□ -0.53
CD28-202ENST00000374481 UGGT2Q9NYU1 1516 aa11.73□□□□□ -0.53
CD28-202ENST00000374481 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
CD28-202ENST00000374481 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 RPSAP08865 295 aaKnown RBP11.72□□□□□ -0.53
CD28-202ENST00000374481 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
CD28-202ENST00000374481 IRAK4Q9NWZ3 460 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 YEATS4O95619 227 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 GIGYF2Q6Y7W6 1299 aaKnown RBP11.72□□□□□ -0.53
CD28-202ENST00000374481 CPLX4Q7Z7G2 160 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 RALGAPBQ86X10 1494 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 CDK13Q14004 1512 aaKnown RBP11.72□□□□□ -0.53
CD28-202ENST00000374481 CCDC151A5D8V7 595 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 GOLGA6BA6NDN3 693 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 GLRX3O76003 335 aaKnown RBP11.72□□□□□ -0.53
CD28-202ENST00000374481 GNGT1P63211 74 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 DONSONQ9NYP3 566 aa11.72□□□□□ -0.53
CD28-202ENST00000374481 SLC8A1P32418 973 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 ST5P78524 1137 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 CCDC113Q9H0I3 377 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 LUC7LQ9NQ29 371 aaKnown RBP11.71□□□□□ -0.53
CD28-202ENST00000374481 CHUKO15111 745 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 TUBB2AQ13885 445 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 SPA17Q15506 151 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 ANKS4BQ8N8V4 417 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 TUBB2BQ9BVA1 445 aa11.71□□□□□ -0.53
CD28-202ENST00000374481 SPATA31E1Q6ZUB1 1445 aa11.71□□□□□ -0.54
CD28-202ENST00000374481 NUTM2DQ5VT03 806 aaPredicted RBP11.71□□□□□ -0.54
CD28-202ENST00000374481 PNMA8AQ86V59 439 aaPredicted RBP11.71□□□□□ -0.54
CD28-202ENST00000374481 TDRD7Q8NHU6 1098 aaKnown RBP11.71□□□□□ -0.54
CD28-202ENST00000374481 PPFIA1Q13136 1202 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 E2F5Q15329 346 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 SNCBQ16143 134 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 EP400NLQ6ZTU2 488 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 GNL3LQ9NVN8 582 aaKnown RBP11.7□□□□□ -0.54
CD28-202ENST00000374481 EHBP1Q8NDI1 1231 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 CAPZA3Q96KX2 299 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 NAA15Q9BXJ9 866 aaKnown RBP11.7□□□□□ -0.54
CD28-202ENST00000374481 PARD6BQ9BYG5 372 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 FCHSD2O94868 740 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 SPATS2Q86XZ4 545 aaKnown RBP11.7□□□□□ -0.54
CD28-202ENST00000374481 CAPS2Q9BXY5 557 aa11.7□□□□□ -0.54
CD28-202ENST00000374481 TEFQ10587 303 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 OTUD7AQ8TE49 926 aaPredicted RBP11.69□□□□□ -0.54
CD28-202ENST00000374481 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 XPO4Q9C0E2 1151 aaKnown RBP11.69□□□□□ -0.54
CD28-202ENST00000374481 IL16Q14005 1332 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 CFAP58Q5T655 872 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 COG3Q96JB2 828 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 RIPOR2Q9Y4F9 1068 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 KIF3BO15066 747 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 PCK1P35558 622 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 IRX1P78414 480 aaPredicted RBP11.69□□□□□ -0.54
CD28-202ENST00000374481 FANCCQ00597 558 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 LMNTD2Q8IXW0 634 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 TRMT2AQ8IZ69 625 aaKnown RBP11.69□□□□□ -0.54
CD28-202ENST00000374481 ARMC2Q8NEN0 867 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 TAF4BQ92750 862 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 BRF1Q92994 677 aa11.69□□□□□ -0.54
CD28-202ENST00000374481 CALR3Q96L12 384 aaKnown RBP11.69□□□□□ -0.54
CD28-202ENST00000374481 ZBTB7BO15156 539 aaPredicted RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 USO1O60763 962 aaKnown RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 DNA2P51530 1060 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 NEXNQ0ZGT2 675 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 NFE2L2Q16236 605 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 CC2D1AQ6P1N0 951 aaPredicted RBP11.68□□□□□ -0.54
CD28-202ENST00000374481 KIF1BPQ96EK5 621 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 KCNF1Q9H3M0 494 aa11.68□□□□□ -0.54
CD28-202ENST00000374481 CABP2Q9NPB3 220 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms