RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 COG3Q96JB2 828 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 C14orf93Q9H972 538 aaKnown RBP12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 CHMP4BP1P59074 171 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 SCLT1Q96NL6 688 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 LZTFL1Q9NQ48 299 aa12.95□□□□□ -0.34
SYNPO2L-201ENST00000372873 VAMP4O75379 141 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 ZNF853P0CG23 659 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 MRFAP1L1Q96HT8 127 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 CPSF2Q9P2I0 782 aaKnown RBP12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 CDC42BPAQ5VT25 1732 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 TTC6Q86TZ1 520 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 JPH2Q9BR39 696 aaPredicted RBP12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 ASXL2Q76L83 1435 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 A0A087WUV0 522 aaPredicted RBP12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 SSBP05455 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 SUFUQ9UMX1 484 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 GOLGA6L10A6NI86 522 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 ATP2C2O75185 946 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 ATP2B1P20020 1258 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 LONRF2Q1L5Z9 754 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 TXNDC2Q86VQ3 553 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 SLC52A1Q9NWF4 448 aa12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
SYNPO2L-201ENST00000372873 MPHOSPH10O00566 681 aaKnown RBP12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 ZEB2O60315 1214 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 NAP1L1P55209 391 aaKnown RBP12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 MUM1L1Q5H9M0 696 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 TDRD7Q8NHU6 1098 aaKnown RBP12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 MPHOSPH8Q99549 860 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCDC196A0A1B0GTZ2 297 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 ODF2Q5BJF6 829 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 FMNL3Q8IVF7 1028 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 FAM76AQ8TAV0 307 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 PPP1R13BQ96KQ4 1090 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 MBIPQ9NS73 344 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 CAPN7Q9Y6W3 813 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 ARHGEF5Q12774 1597 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 TTC37Q6PGP7 1564 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 NR1I2O75469 434 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 TRIM29Q14134 588 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 CPLX2Q6PUV4 134 aaKnown RBP12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 EP400NLQ6ZTU2 488 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 CNNM3Q8NE01 707 aa12.93□□□□□ -0.34
SYNPO2L-201ENST00000372873 CFAP65Q6ZU64 1925 aaKnown RBP12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 RPGRIP1LQ68CZ1 1315 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 LTV1Q96GA3 475 aaPredicted RBP12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 IMPACTQ9P2X3 320 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 NDUFAB1O14561 156 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCDC144CPQ8IYA2 1237 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 ATRIPQ8WXE1 791 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 VEZTQ9HBM0 779 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 POLKQ9UBT6 870 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 STK11IPQ8N1F8 1099 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 RASSF8Q8NHQ8 419 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 MYO6Q9UM54 1294 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 ERCC6L2Q5T890 1561 aa12.92□□□□□ -0.34
SYNPO2L-201ENST00000372873 BRD3Q15059 726 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 NGDNQ8NEJ9 315 aaKnown RBP12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 XPO4Q9C0E2 1151 aaKnown RBP12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 WDR7Q9Y4E6 1490 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 HIP1O00291 1037 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 TADA2BQ86TJ2 420 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCDC114Q96M63 670 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 EPC1Q9H2F5 836 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 MTMR6Q9Y217 621 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCT5P48643 541 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 KIAA1328Q86T90 577 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 JMYQ8N9B5 988 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 KIF1BPQ96EK5 621 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 PPIP5K1Q6PFW1 1433 aa12.91□□□□□ -0.34
SYNPO2L-201ENST00000372873 KIF1CO43896 1103 aaKnown RBP12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCDC181Q5TID7 509 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 DYDC1Q8WWB3 177 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 TULP2O00295 520 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 GLRX3O76003 335 aaKnown RBP12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 CCDC175P0C221 793 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 GCKP35557 465 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 ZNF569Q5MCW4 686 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 CDC37L1Q7L3B6 337 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 BRF1Q92994 677 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 PARD6BQ9BYG5 372 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 CTAGE9A4FU28 777 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 HSPA4P34932 840 aa12.9□□□□□ -0.34
SYNPO2L-201ENST00000372873 BIRC2Q13490 618 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms