RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 RFX7Q2KHR2 1363 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 PHKG2P15735 406 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 PTPN12Q05209 780 aaKnown RBP15.17■□□□□ 0.02
CTPS1-202ENST00000372621 GLIPR1L2Q4G1C9 344 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 DYNC1I1O14576 645 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 RABL6Q3YEC7 729 aaPredicted RBP15.17■□□□□ 0.02
CTPS1-202ENST00000372621 NFATC2IPQ8NCF5 419 aa15.17■□□□□ 0.02
CTPS1-202ENST00000372621 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
CTPS1-202ENST00000372621 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
CTPS1-202ENST00000372621 MEGF6O75095 1541 aa15.16■□□□□ 0.02
CTPS1-202ENST00000372621 TNNI3KQ59H18 835 aa15.16■□□□□ 0.02
CTPS1-202ENST00000372621 TTC12Q9H892 705 aaPredicted RBP15.16■□□□□ 0.02
CTPS1-202ENST00000372621 FPGT-TNNI3KV9GXZ4 949 aa15.16■□□□□ 0.02
CTPS1-202ENST00000372621 C1orf167Q5SNV9 1468 aa15.16■□□□□ 0.02
CTPS1-202ENST00000372621 GLI3P10071 1580 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 NOLC1Q14978 699 aaKnown RBP eCLIP15.15■□□□□ 0.02
CTPS1-202ENST00000372621 ANKRD13DQ6ZTN6 518 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 MPNDQ8N594 471 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 SPTLC3Q9NUV7 552 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 RBM10P98175 930 aaKnown RBP15.15■□□□□ 0.02
CTPS1-202ENST00000372621 FAM173BQ6P4H8 233 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 FERMT3Q86UX7 667 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.15■□□□□ 0.029e-7■■■□□ 18.8
CTPS1-202ENST00000372621 CCDC192P0DO97 292 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 LIG1P18858 919 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 RAPGEF4Q8WZA2 1011 aa15.15■□□□□ 0.02
CTPS1-202ENST00000372621 ZNF609O15014 1411 aa15.14■□□□□ 0.01
CTPS1-202ENST00000372621 TFCP2Q12800 502 aa15.14■□□□□ 0.01
CTPS1-202ENST00000372621 USP16Q9Y5T5 823 aa15.14■□□□□ 0.01
CTPS1-202ENST00000372621 LAMA4Q16363 1823 aa15.14■□□□□ 0.01
CTPS1-202ENST00000372621 PKD1L3Q7Z443 1732 aa15.14■□□□□ 0.01
CTPS1-202ENST00000372621 KRT32Q14532 448 aa15.14■□□□□ 0.01
CTPS1-202ENST00000372621 PLEKHG2Q9H7P9 1386 aa15.14■□□□□ 0.01
CTPS1-202ENST00000372621 ZC3H6P61129 1189 aaKnown RBP15.13■□□□□ 0.01
CTPS1-202ENST00000372621 SCAND2PQ9GZW5 306 aaPredicted RBP15.13■□□□□ 0.01
CTPS1-202ENST00000372621 LAMB4A4D0S4 1761 aa15.13■□□□□ 0.01
CTPS1-202ENST00000372621 SNRPA1P09661 255 aaKnown RBP15.13■□□□□ 0.01
CTPS1-202ENST00000372621 CASP7P55210 303 aa15.13■□□□□ 0.01
CTPS1-202ENST00000372621 RBM43Q6ZSC3 357 aaKnown RBP15.13■□□□□ 0.01
CTPS1-202ENST00000372621 GTF3C6Q969F1 213 aa15.13■□□□□ 0.01
CTPS1-202ENST00000372621 MRVI1Q9Y6F6 885 aa15.13■□□□□ 0.01
CTPS1-202ENST00000372621 ADAMTSL3P82987 1691 aa15.13■□□□□ 0.01
CTPS1-202ENST00000372621 NUP62CLQ9H1M0 184 aa15.13■□□□□ 0.01
CTPS1-202ENST00000372621 MAP3K11Q16584 847 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 FAM200AQ8TCP9 573 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 MAP7D2Q96T17 732 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 HAUS7Q99871 368 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 MYH15Q9Y2K3 1946 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
CTPS1-202ENST00000372621 IFNL2Q8IZJ0 200 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 MYRIPQ8NFW9 859 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 LEO1Q8WVC0 666 aaPredicted RBP15.12■□□□□ 0.01
CTPS1-202ENST00000372621 JARID2Q92833 1246 aaPredicted RBP15.12■□□□□ 0.01
CTPS1-202ENST00000372621 NEK1Q96PY6 1258 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 KCNF1Q9H3M0 494 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 FAM13BQ9NYF5 915 aa15.12■□□□□ 0.01
CTPS1-202ENST00000372621 CHGBP05060 677 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 STK3Q13188 491 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 NLRP2Q9NX02 1062 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 TYRO3Q06418 890 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 SPATA32Q96LK8 384 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 NDUFB9Q9Y6M9 179 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 CYP21A2P08686 494 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 UBE3BQ7Z3V4 1068 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 C17orf53Q8N3J3 647 aaPredicted RBP15.11■□□□□ 0.01
CTPS1-202ENST00000372621 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 DBNDD2Q9BQY9 259 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 DACT1Q9NYF0 836 aa15.11■□□□□ 0.01
CTPS1-202ENST00000372621 U3KPZ7 1027 aaPredicted RBP15.11■□□□□ 0.01
CTPS1-202ENST00000372621 JAK2O60674 1132 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 PIP4K2AP48426 406 aaPredicted RBP15.1■□□□□ 0.01
CTPS1-202ENST00000372621 RESTQ13127 1097 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 KIAA1524Q8TCG1 905 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 DCAF5Q96JK2 942 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 SEC62Q99442 399 aaKnown RBP15.1■□□□□ 0.01
CTPS1-202ENST00000372621 CYP27B1O15528 508 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 CAMK4Q16566 473 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 MCMDC2Q4G0Z9 681 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 CCDC129Q6ZRS4 1044 aa15.1■□□□□ 0.01
CTPS1-202ENST00000372621 TFIP11Q9UBB9 837 aaKnown RBP15.1■□□□□ 0.01
CTPS1-202ENST00000372621 PARP4Q9UKK3 1724 aaKnown RBP15.1■□□□□ 0.01
CTPS1-202ENST00000372621 TPM3P06753 285 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 GTF2F1P35269 517 aaKnown RBP eCLIP15.09■□□□□ 0.01
CTPS1-202ENST00000372621 Q6ZUG5 572 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 PGBD1Q96JS3 809 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 SH3TC1Q8TE82 1336 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 FMNL2Q96PY5 1086 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 CLSTN2Q9H4D0 955 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 DDX19AQ9NUU7 478 aaKnown RBP15.09■□□□□ 0.01
CTPS1-202ENST00000372621 NUP188Q5SRE5 1749 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 HMGN5P82970 282 aaKnown RBP15.09■□□□□ 0.01
CTPS1-202ENST00000372621 SMARCC2Q8TAQ2 1214 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 CHMP3Q9Y3E7 222 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 TMEM94Q12767 1356 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 PALLDQ8WX93 1383 aa15.09■□□□□ 0.01
CTPS1-202ENST00000372621 TJP1Q07157 1748 aa15.08■□□□□ 0.01
CTPS1-202ENST00000372621 A0A087WZG4 1122 aa15.08■□□□□ 0.01
CTPS1-202ENST00000372621 PLCB2Q00722 1185 aa15.08■□□□□ 0.01
CTPS1-202ENST00000372621 TTC5Q8N0Z6 440 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms