RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 LNPKQ9C0E8 428 aa19.88■□□□□ 0.77
C9orf78-201ENST00000372447 CDHR2Q9BYE9 1310 aa19.87■□□□□ 0.77
C9orf78-201ENST00000372447 ANKRD45Q5TZF3 282 aa19.87■□□□□ 0.77
C9orf78-201ENST00000372447 C3orf67Q6ZVT6 689 aa19.87■□□□□ 0.77
C9orf78-201ENST00000372447 KLHL34Q8N239 644 aa19.87■□□□□ 0.77
C9orf78-201ENST00000372447 SEC24BO95487 1268 aa19.86■□□□□ 0.77
C9orf78-201ENST00000372447 CD2APQ9Y5K6 639 aa19.86■□□□□ 0.77
C9orf78-201ENST00000372447 N4BP2Q86UW6 1770 aaPredicted RBP19.85■□□□□ 0.77
C9orf78-201ENST00000372447 RPAP2Q8IXW5 612 aaPredicted RBP19.85■□□□□ 0.77
C9orf78-201ENST00000372447 ANKRD44Q8N8A2 993 aa19.85■□□□□ 0.77
C9orf78-201ENST00000372447 FHDC1Q9C0D6 1143 aaPredicted RBP19.85■□□□□ 0.77
C9orf78-201ENST00000372447 KLRG2A4D1S0 409 aaPredicted RBP19.85■□□□□ 0.77
C9orf78-201ENST00000372447 PDE6BP35913 854 aa19.85■□□□□ 0.77
C9orf78-201ENST00000372447 KAZALD1Q96I82 304 aa19.85■□□□□ 0.77
C9orf78-201ENST00000372447 NLRP3Q96P20 1036 aa19.85■□□□□ 0.77
C9orf78-201ENST00000372447 PDE8AO60658 829 aa19.84■□□□□ 0.77
C9orf78-201ENST00000372447 SUCLG2Q96I99 432 aa19.84■□□□□ 0.77
C9orf78-201ENST00000372447 PLA2G12BQ9BX93 195 aa19.84■□□□□ 0.77
C9orf78-201ENST00000372447 RIC1Q4ADV7 1423 aa19.83■□□□□ 0.77
C9orf78-201ENST00000372447 UBTFL1P0CB47 393 aaPredicted RBP19.83■□□□□ 0.77
C9orf78-201ENST00000372447 CEP85Q6P2H3 762 aa19.83■□□□□ 0.77
C9orf78-201ENST00000372447 DCTPP1Q9H773 170 aa19.83■□□□□ 0.77
C9orf78-201ENST00000372447 GNAI3P08754 354 aa19.83■□□□□ 0.76
C9orf78-201ENST00000372447 HSP90B1P14625 803 aaKnown RBP19.83■□□□□ 0.76
C9orf78-201ENST00000372447 CHRNA5P30532 468 aa19.83■□□□□ 0.76
C9orf78-201ENST00000372447 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.76
C9orf78-201ENST00000372447 LRP5O75197 1615 aa19.82■□□□□ 0.76
C9orf78-201ENST00000372447 ANKRD31Q8N7Z5 1873 aa19.82■□□□□ 0.76
C9orf78-201ENST00000372447 A0A0G2JLW4 131 aa19.82■□□□□ 0.76
C9orf78-201ENST00000372447 TGFB2P61812 414 aa19.82■□□□□ 0.76
C9orf78-201ENST00000372447 FOXO4P98177 505 aa19.82■□□□□ 0.76
C9orf78-201ENST00000372447 CRY2Q49AN0 593 aa19.82■□□□□ 0.76
C9orf78-201ENST00000372447 SYT17Q9BSW7 474 aa19.82■□□□□ 0.76
C9orf78-201ENST00000372447 SRGNP10124 158 aa19.81■□□□□ 0.76
C9orf78-201ENST00000372447 SF3B3Q15393 1217 aaKnown RBP19.81■□□□□ 0.76
C9orf78-201ENST00000372447 C2CD5Q86YS7 1000 aa19.81■□□□□ 0.76
C9orf78-201ENST00000372447 NLGN2Q8NFZ4 835 aa19.81■□□□□ 0.76
C9orf78-201ENST00000372447 UPF2Q9HAU5 1272 aaKnown RBP19.81■□□□□ 0.76
C9orf78-201ENST00000372447 TNRC6CQ9HCJ0 1690 aaKnown RBP19.81■□□□□ 0.76
C9orf78-201ENST00000372447 DDX60Q8IY21 1712 aaKnown RBP19.81■□□□□ 0.76
C9orf78-201ENST00000372447 KIF13BQ9NQT8 1826 aa19.81■□□□□ 0.76
C9orf78-201ENST00000372447 H0YIN7 160 aa19.8■□□□□ 0.76
C9orf78-201ENST00000372447 DPEP1P16444 411 aa19.8■□□□□ 0.76
C9orf78-201ENST00000372447 CTSWP56202 376 aa19.8■□□□□ 0.76
C9orf78-201ENST00000372447 TTLL11Q8NHH1 800 aa19.8■□□□□ 0.76
C9orf78-201ENST00000372447 GOLGB1Q14789 3259 aaKnown RBP19.8■□□□□ 0.76
C9orf78-201ENST00000372447 CSF1RP07333 972 aa19.8■□□□□ 0.76
C9orf78-201ENST00000372447 KCNA3P22001 575 aa19.8■□□□□ 0.76
C9orf78-201ENST00000372447 CCDC85AQ96PX6 553 aaPredicted RBP19.8■□□□□ 0.76
C9orf78-201ENST00000372447 BICC1Q9H694 974 aaKnown RBP19.8■□□□□ 0.76
C9orf78-201ENST00000372447 LRRFIP2Q9Y608 721 aaKnown RBP19.8■□□□□ 0.76
C9orf78-201ENST00000372447 LMBR1LQ6UX01 489 aa19.78■□□□□ 0.76
C9orf78-201ENST00000372447 GNAI2P04899 355 aa19.78■□□□□ 0.76
C9orf78-201ENST00000372447 RABL6Q3YEC7 729 aaPredicted RBP19.78■□□□□ 0.76
C9orf78-201ENST00000372447 MASTLQ96GX5 879 aa19.78■□□□□ 0.76
C9orf78-201ENST00000372447 HDAC5Q9UQL6 1122 aa19.78■□□□□ 0.76
C9orf78-201ENST00000372447 NPR1P16066 1061 aa19.77■□□□□ 0.76
C9orf78-201ENST00000372447 CCDC152Q4G0S7 254 aa19.77■□□□□ 0.76
C9orf78-201ENST00000372447 BMP2KLQ5H9B9 411 aa19.77■□□□□ 0.76
C9orf78-201ENST00000372447 RPGRQ92834 1020 aaKnown RBP19.77■□□□□ 0.76
C9orf78-201ENST00000372447 ZNF622Q969S3 477 aaKnown RBP eCLIP19.77■□□□□ 0.761e-9■□□□□ 10.8
C9orf78-201ENST00000372447 GREM2Q9H772 168 aa19.77■□□□□ 0.76
C9orf78-201ENST00000372447 LAMB2P55268 1798 aa19.77■□□□□ 0.75
C9orf78-201ENST00000372447 HMMRO75330 724 aa19.76■□□□□ 0.75
C9orf78-201ENST00000372447 HOXA10P31260 410 aaPredicted RBP19.76■□□□□ 0.75
C9orf78-201ENST00000372447 SEC31BQ9NQW1 1179 aa19.76■□□□□ 0.75
C9orf78-201ENST00000372447 RBM17Q96I25 401 aaKnown RBP19.75■□□□□ 0.75
C9orf78-201ENST00000372447 TBC1D32Q96NH3 1257 aa19.75■□□□□ 0.75
C9orf78-201ENST00000372447 DAXXQ9UER7 740 aaPredicted RBP19.75■□□□□ 0.75
C9orf78-201ENST00000372447 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
C9orf78-201ENST00000372447 STYK1Q6J9G0 422 aa19.75■□□□□ 0.75
C9orf78-201ENST00000372447 DDX46Q7L014 1031 aaKnown RBP19.75■□□□□ 0.75
C9orf78-201ENST00000372447 WWC3Q9ULE0 1092 aa19.75■□□□□ 0.75
C9orf78-201ENST00000372447 CHMP3Q9Y3E7 222 aa19.75■□□□□ 0.75
C9orf78-201ENST00000372447 COL11A2P13942 1736 aaPredicted RBP19.75■□□□□ 0.75
C9orf78-201ENST00000372447 PIM2Q9P1W9 311 aa19.74■□□□□ 0.75
C9orf78-201ENST00000372447 ITGA6P23229 1130 aa19.73■□□□□ 0.75
C9orf78-201ENST00000372447 CRAMP1Q96RY5 1269 aa19.73■□□□□ 0.75
C9orf78-201ENST00000372447 ALDH1B1P30837 517 aa19.72■□□□□ 0.75
C9orf78-201ENST00000372447 CELF1Q92879 486 aaKnown RBP19.72■□□□□ 0.75
C9orf78-201ENST00000372447 RTL9Q8NET4 1388 aa19.72■□□□□ 0.75
C9orf78-201ENST00000372447 MYH3P11055 1940 aa19.72■□□□□ 0.75
C9orf78-201ENST00000372447 TTLL6Q8N841 843 aa19.72■□□□□ 0.75
C9orf78-201ENST00000372447 CNKSR1Q969H4 720 aa19.72■□□□□ 0.75
C9orf78-201ENST00000372447 IFIT5Q13325 482 aaKnown RBP19.71■□□□□ 0.75
C9orf78-201ENST00000372447 MTX1Q13505 466 aa19.71■□□□□ 0.75
C9orf78-201ENST00000372447 GRAPQ13588 217 aa19.71■□□□□ 0.75
C9orf78-201ENST00000372447 CCDC57Q2TAC2 916 aa19.71■□□□□ 0.75
C9orf78-201ENST00000372447 PLEKHM2Q8IWE5 1019 aa19.71■□□□□ 0.75
C9orf78-201ENST00000372447 GRAPLQ8TC17 118 aaPredicted RBP19.71■□□□□ 0.75
C9orf78-201ENST00000372447 UTRNP46939 3433 aa19.7■□□□□ 0.74
C9orf78-201ENST00000372447 ANKRD18BA2A2Z9 1011 aa19.7■□□□□ 0.74
C9orf78-201ENST00000372447 SLC4A3P48751 1232 aa19.7■□□□□ 0.74
C9orf78-201ENST00000372447 MFAP1P55081 439 aaKnown RBP19.7■□□□□ 0.74
C9orf78-201ENST00000372447 COL4A1P02462 1669 aa19.7■□□□□ 0.74
C9orf78-201ENST00000372447 PNMA6EA0A0J9YXQ4 647 aa19.7■□□□□ 0.74
C9orf78-201ENST00000372447 RPS8P62241 208 aaKnown RBP19.7■□□□□ 0.74
C9orf78-201ENST00000372447 ATP8B2P98198 1209 aa19.7■□□□□ 0.74
C9orf78-201ENST00000372447 PRPF40BQ6NWY9 871 aaKnown RBP19.7■□□□□ 0.74
C9orf78-201ENST00000372447 TAF1P21675 1872 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms