RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 MRC1P22897 1456 aa22.77■■□□□ 1.24
TMEM53-202ENST00000372237 UQCRHLA0A096LP55 91 aa22.76■■□□□ 1.23
TMEM53-202ENST00000372237 KDM4AO75164 1064 aa22.76■■□□□ 1.23
TMEM53-202ENST00000372237 UQCRHP07919 91 aa22.76■■□□□ 1.23
TMEM53-202ENST00000372237 ANKRD13DQ6ZTN6 518 aa22.76■■□□□ 1.23
TMEM53-202ENST00000372237 TAF6LQ9Y6J9 622 aa22.76■■□□□ 1.23
TMEM53-202ENST00000372237 PHKG2P15735 406 aa22.76■■□□□ 1.23
TMEM53-202ENST00000372237 EDC3Q96F86 508 aaKnown RBP22.76■■□□□ 1.23
TMEM53-202ENST00000372237 ZNF496Q96IT1 587 aaPredicted RBP22.76■■□□□ 1.23
TMEM53-202ENST00000372237 ALDH8A1Q9H2A2 487 aaPredicted RBP22.76■■□□□ 1.23
TMEM53-202ENST00000372237 COPRSQ9NQ92 184 aa22.76■■□□□ 1.23
TMEM53-202ENST00000372237 TATP17735 454 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-202ENST00000372237 PLCB2Q00722 1185 aa22.75■■□□□ 1.23
TMEM53-202ENST00000372237 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
TMEM53-202ENST00000372237 TOB2Q14106 344 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-202ENST00000372237 TTC6Q86TZ1 520 aa22.75■■□□□ 1.23
TMEM53-202ENST00000372237 ZNF830Q96NB3 372 aaPredicted RBP22.75■■□□□ 1.23
TMEM53-202ENST00000372237 JCADQ9P266 1359 aa22.75■■□□□ 1.23
TMEM53-202ENST00000372237 TAF5LO75529 589 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 TSGA10IPQ3SY00 556 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 JARID2Q92833 1246 aaPredicted RBP22.74■■□□□ 1.23
TMEM53-202ENST00000372237 PDCL3Q9H2J4 239 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 ATP5JP18859 108 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 TNNI3KQ59H18 835 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 TTC5Q8N0Z6 440 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 DBNLQ9UJU6 430 aaKnown RBP22.74■■□□□ 1.23
TMEM53-202ENST00000372237 USP16Q9Y5T5 823 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 FPGT-TNNI3KV9GXZ4 949 aa22.74■■□□□ 1.23
TMEM53-202ENST00000372237 STK3Q13188 491 aa22.73■■□□□ 1.23
TMEM53-202ENST00000372237 SASS6Q6UVJ0 657 aa22.73■■□□□ 1.23
TMEM53-202ENST00000372237 SLAIN2Q9P270 581 aa22.73■■□□□ 1.23
TMEM53-202ENST00000372237 CCDC192P0DO97 292 aa22.73■■□□□ 1.23
TMEM53-202ENST00000372237 PIP4K2AP48426 406 aaPredicted RBP22.73■■□□□ 1.23
TMEM53-202ENST00000372237 PTPN12Q05209 780 aaKnown RBP22.73■■□□□ 1.23
TMEM53-202ENST00000372237 TFCP2Q12800 502 aa22.73■■□□□ 1.23
TMEM53-202ENST00000372237 FAM173BQ6P4H8 233 aa22.73■■□□□ 1.23
TMEM53-202ENST00000372237 IFNL2Q8IZJ0 200 aa22.73■■□□□ 1.23
TMEM53-202ENST00000372237 ELP1O95163 1332 aa22.72■■□□□ 1.23
TMEM53-202ENST00000372237 SNRPA1P09661 255 aaKnown RBP22.72■■□□□ 1.23
TMEM53-202ENST00000372237 RBM10P98175 930 aaKnown RBP22.72■■□□□ 1.23
TMEM53-202ENST00000372237 KRT32Q14532 448 aa22.72■■□□□ 1.23
TMEM53-202ENST00000372237 DNTTIP2Q5QJE6 756 aaKnown RBP22.72■■□□□ 1.23
TMEM53-202ENST00000372237 RFX5P48382 616 aaPredicted RBP22.71■■□□□ 1.23
TMEM53-202ENST00000372237 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
TMEM53-202ENST00000372237 USPL1Q5W0Q7 1092 aa22.71■■□□□ 1.23
TMEM53-202ENST00000372237 UBE3BQ7Z3V4 1068 aa22.71■■□□□ 1.23
TMEM53-202ENST00000372237 PIBF1Q8WXW3 757 aa22.71■■□□□ 1.23
TMEM53-202ENST00000372237 TTC12Q9H892 705 aaPredicted RBP22.71■■□□□ 1.23
TMEM53-202ENST00000372237 CHMP3Q9Y3E7 222 aa22.71■■□□□ 1.23
TMEM53-202ENST00000372237 LRP10Q7Z4F1 713 aa22.71■■□□□ 1.23
TMEM53-202ENST00000372237 SCAND2PQ9GZW5 306 aaPredicted RBP22.7■■□□□ 1.22
TMEM53-202ENST00000372237 AFDNP55196 1824 aaKnown RBP22.7■■□□□ 1.22
TMEM53-202ENST00000372237 DNAJC2Q99543 621 aaKnown RBP22.7■■□□□ 1.22
TMEM53-202ENST00000372237 NUP62CLQ9H1M0 184 aa22.7■■□□□ 1.22
TMEM53-202ENST00000372237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.7■■□□□ 1.22
TMEM53-202ENST00000372237 NDUFB9Q9Y6M9 179 aa22.7■■□□□ 1.22
TMEM53-202ENST00000372237 NEK1Q96PY6 1258 aa22.69■■□□□ 1.22
TMEM53-202ENST00000372237 FAM13BQ9NYF5 915 aa22.69■■□□□ 1.22
TMEM53-202ENST00000372237 MEGF6O75095 1541 aa22.69■■□□□ 1.22
TMEM53-202ENST00000372237 GOLGA6L4A6NEF3 574 aa22.69■■□□□ 1.22
TMEM53-202ENST00000372237 CSB-PGBD3P0DP91 1061 aa22.69■■□□□ 1.22
TMEM53-202ENST00000372237 RABL6Q3YEC7 729 aaPredicted RBP22.69■■□□□ 1.22
TMEM53-202ENST00000372237 SPATA32Q96LK8 384 aa22.69■■□□□ 1.22
TMEM53-202ENST00000372237 COL15A1P39059 1388 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 A0A087WZG4 1122 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 LIG1P18858 919 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 NOLC1Q14978 699 aaKnown RBP eCLIP22.68■■□□□ 1.223e-11■□□□□ 9.8
TMEM53-202ENST00000372237 MAP3K11Q16584 847 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 FMNL2Q96PY5 1086 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 ATP5J2-PTCD1G3V325 749 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 DYNC1I1O14576 645 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 PTCD1O75127 700 aaKnown RBP22.68■■□□□ 1.22
TMEM53-202ENST00000372237 CAMK4Q16566 473 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 DCAF5Q96JK2 942 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 DBNDD2Q9BQY9 259 aa22.68■■□□□ 1.22
TMEM53-202ENST00000372237 CPDO75976 1380 aa22.67■■□□□ 1.22
TMEM53-202ENST00000372237 TFIP11Q9UBB9 837 aaKnown RBP22.67■■□□□ 1.22
TMEM53-202ENST00000372237 SOS2Q07890 1332 aaPredicted RBP22.67■■□□□ 1.22
TMEM53-202ENST00000372237 COL18A1P39060 1754 aa22.67■■□□□ 1.22
TMEM53-202ENST00000372237 RFX7Q2KHR2 1363 aa22.67■■□□□ 1.22
TMEM53-202ENST00000372237 CCDC129Q6ZRS4 1044 aa22.66■■□□□ 1.22
TMEM53-202ENST00000372237 GTF3C6Q969F1 213 aa22.66■■□□□ 1.22
TMEM53-202ENST00000372237 U3KPZ7 1027 aaPredicted RBP22.66■■□□□ 1.22
TMEM53-202ENST00000372237 AP5Z1O43299 807 aa22.66■■□□□ 1.22
TMEM53-202ENST00000372237 ZNF609O15014 1411 aa22.66■■□□□ 1.22
TMEM53-202ENST00000372237 HSP90B1P14625 803 aaKnown RBP22.65■■□□□ 1.22
TMEM53-202ENST00000372237 MCMDC2Q4G0Z9 681 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 Q6ZUG5 572 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 FAM200AQ8TCP9 573 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 SEC62Q99442 399 aaKnown RBP22.65■■□□□ 1.22
TMEM53-202ENST00000372237 HAUS7Q99871 368 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 CHGBP05060 677 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 TNMDQ9H2S6 317 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 DACT1Q9NYF0 836 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 ARFGEF2Q9Y6D5 1785 aa22.65■■□□□ 1.22
TMEM53-202ENST00000372237 CYP27B1O15528 508 aa22.64■■□□□ 1.22
TMEM53-202ENST00000372237 CYP21A2P08686 494 aa22.64■■□□□ 1.22
TMEM53-202ENST00000372237 DDX46Q7L014 1031 aaKnown RBP22.64■■□□□ 1.22
TMEM53-202ENST00000372237 LEO1Q8WVC0 666 aaPredicted RBP22.64■■□□□ 1.22
TMEM53-202ENST00000372237 JAK2O60674 1132 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms