RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 USP48Q86UV5 1035 aa34.62■■■■□ 3.13
SSBP3-204ENST00000371320 CCDC191Q8NCU4 936 aa34.62■■■■□ 3.13
SSBP3-204ENST00000371320 DNAJC2Q99543 621 aaKnown RBP34.62■■■■□ 3.13
SSBP3-204ENST00000371320 JCADQ9P266 1359 aa34.62■■■■□ 3.13
SSBP3-204ENST00000371320 SYCE3A1L190 88 aa34.62■■■■□ 3.13
SSBP3-204ENST00000371320 HAUS7Q99871 368 aa34.62■■■■□ 3.13
SSBP3-204ENST00000371320 RBSNQ9H1K0 784 aa34.62■■■■□ 3.13
SSBP3-204ENST00000371320 TAF5LO75529 589 aa34.61■■■■□ 3.13
SSBP3-204ENST00000371320 GJB2P29033 226 aa34.61■■■■□ 3.13
SSBP3-204ENST00000371320 PPP1R9BQ96SB3 815 aa34.61■■■■□ 3.13
SSBP3-204ENST00000371320 HMG20BQ9P0W2 317 aa34.61■■■■□ 3.13
SSBP3-204ENST00000371320 ME3Q16798 604 aa34.61■■■■□ 3.13
SSBP3-204ENST00000371320 BLOC1S2Q6QNY1 142 aa34.61■■■■□ 3.13
SSBP3-204ENST00000371320 NDUFB9Q9Y6M9 179 aa34.61■■■■□ 3.13
SSBP3-204ENST00000371320 RFX7Q2KHR2 1363 aa34.6■■■■□ 3.13
SSBP3-204ENST00000371320 PAPPAQ13219 1627 aa34.6■■■■□ 3.13
SSBP3-204ENST00000371320 TNS2Q63HR2 1409 aa34.6■■■■□ 3.13
SSBP3-204ENST00000371320 ATG9AQ7Z3C6 839 aa34.59■■■■□ 3.13
SSBP3-204ENST00000371320 SYAP1Q96A49 352 aaPredicted RBP34.59■■■■□ 3.13
SSBP3-204ENST00000371320 TPCN1Q9ULQ1 816 aa34.59■■■■□ 3.13
SSBP3-204ENST00000371320 NUP188Q5SRE5 1749 aa34.58■■■■□ 3.13
SSBP3-204ENST00000371320 F13A1P00488 732 aa34.58■■■■□ 3.13
SSBP3-204ENST00000371320 TMEM87AQ8NBN3 555 aa34.58■■■■□ 3.13
SSBP3-204ENST00000371320 ATP6V1DQ9Y5K8 247 aa34.58■■■■□ 3.13
SSBP3-204ENST00000371320 GADD45BO75293 160 aaPredicted RBP34.58■■■■□ 3.13
SSBP3-204ENST00000371320 ANKRD1Q15327 319 aa34.58■■■■□ 3.13
SSBP3-204ENST00000371320 TSGA10IPQ3SY00 556 aa34.57■■■■□ 3.12
SSBP3-204ENST00000371320 ABCA3Q99758 1704 aa34.57■■■■□ 3.12
SSBP3-204ENST00000371320 RPS6KB1P23443 525 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 ST3GAL1Q11201 340 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 NECAB1Q8N987 351 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 TMOD3Q9NYL9 352 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 IL15P40933 162 aaPredicted RBP34.56■■■■□ 3.12
SSBP3-204ENST00000371320 USPL1Q5W0Q7 1092 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 NEUROD6Q96NK8 337 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 GPR108Q9NPR9 543 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 TAF6LQ9Y6J9 622 aa34.56■■■■□ 3.12
SSBP3-204ENST00000371320 ALDH8A1Q9H2A2 487 aaPredicted RBP34.55■■■■□ 3.12
SSBP3-204ENST00000371320 CNPY2Q9Y2B0 182 aa34.55■■■■□ 3.12
SSBP3-204ENST00000371320 CCDC9Q9Y3X0 531 aaKnown RBP34.55■■■■□ 3.12
SSBP3-204ENST00000371320 ESPNB1AK53 854 aa34.54■■■■□ 3.12
SSBP3-204ENST00000371320 COL9A3Q14050 684 aaPredicted RBP34.54■■■■□ 3.12
SSBP3-204ENST00000371320 DDX46Q7L014 1031 aaKnown RBP34.54■■■■□ 3.12
SSBP3-204ENST00000371320 SHANK3Q9BYB0 1731 aa34.54■■■■□ 3.12
SSBP3-204ENST00000371320 CLCN1P35523 988 aa34.53■■■■□ 3.12
SSBP3-204ENST00000371320 ZNF609O15014 1411 aa34.53■■■■□ 3.12
SSBP3-204ENST00000371320 KRT32Q14532 448 aa34.53■■■■□ 3.12
SSBP3-204ENST00000371320 MCMDC2Q4G0Z9 681 aa34.53■■■■□ 3.12
SSBP3-204ENST00000371320 MTMR6Q9Y217 621 aa34.53■■■■□ 3.12
SSBP3-204ENST00000371320 TJP1Q07157 1748 aa34.53■■■■□ 3.12
SSBP3-204ENST00000371320 KBTBD3Q8NAB2 608 aa34.52■■■■□ 3.12
SSBP3-204ENST00000371320 EYA2O00167 538 aa34.51■■■■□ 3.12
SSBP3-204ENST00000371320 TCEANC2Q96MN5 208 aa34.51■■■■□ 3.12
SSBP3-204ENST00000371320 TIMM10P62072 90 aa34.51■■■■□ 3.11
SSBP3-204ENST00000371320 ATG3Q9NT62 314 aa34.51■■■■□ 3.11
SSBP3-204ENST00000371320 U3KPZ7 1027 aaPredicted RBP34.51■■■■□ 3.11
SSBP3-204ENST00000371320 DTNBO60941 627 aa34.5■■■■□ 3.11
SSBP3-204ENST00000371320 CHGBP05060 677 aa34.5■■■■□ 3.11
SSBP3-204ENST00000371320 CCDC129Q6ZRS4 1044 aa34.5■■■■□ 3.11
SSBP3-204ENST00000371320 SEC62Q99442 399 aaKnown RBP34.5■■■■□ 3.11
SSBP3-204ENST00000371320 LRRC24Q50LG9 513 aa34.5■■■■□ 3.11
SSBP3-204ENST00000371320 ZNF594Q96JF6 807 aaPredicted RBP34.5■■■■□ 3.11
SSBP3-204ENST00000371320 ISCA1Q9BUE6 129 aa34.5■■■■□ 3.11
SSBP3-204ENST00000371320 PHF14O94880 888 aa34.49■■■■□ 3.11
SSBP3-204ENST00000371320 ZNF330Q9Y3S2 320 aaPredicted RBP34.49■■■■□ 3.11
SSBP3-204ENST00000371320 CIAO1O76071 339 aa34.48■■■■□ 3.11
SSBP3-204ENST00000371320 TCIRG1Q13488 830 aa34.48■■■■□ 3.11
SSBP3-204ENST00000371320 TOB2Q14106 344 aaPredicted RBP34.48■■■■□ 3.11
SSBP3-204ENST00000371320 PAG1Q9NWQ8 432 aa34.48■■■■□ 3.11
SSBP3-204ENST00000371320 GOLIM4O00461 696 aa34.47■■■■□ 3.11
SSBP3-204ENST00000371320 TEX13AQ9BXU3 409 aaPredicted RBP34.47■■■■□ 3.11
SSBP3-204ENST00000371320 VPS37CA5D8V6 355 aaPredicted RBP34.46■■■■□ 3.11
SSBP3-204ENST00000371320 PDIA4P13667 645 aaKnown RBP34.46■■■■□ 3.11
SSBP3-204ENST00000371320 PALLDQ8WX93 1383 aa34.46■■■■□ 3.11
SSBP3-204ENST00000371320 SH3TC1Q8TE82 1336 aa34.46■■■■□ 3.11
SSBP3-204ENST00000371320 UBE2HP62256 183 aa34.46■■■■□ 3.11
SSBP3-204ENST00000371320 ASAP1Q9ULH1 1129 aa34.46■■■■□ 3.11
SSBP3-204ENST00000371320 TCHHQ07283 1943 aa34.45■■■■□ 3.11
SSBP3-204ENST00000371320 LARP1BQ659C4 914 aaKnown RBP34.45■■■■□ 3.11
SSBP3-204ENST00000371320 PIGBQ92521 554 aa34.45■■■■□ 3.11
SSBP3-204ENST00000371320 NEK1Q96PY6 1258 aa34.45■■■■□ 3.11
SSBP3-204ENST00000371320 TSPY26PQ9H489 355 aa34.45■■■■□ 3.11
SSBP3-204ENST00000371320 TOGARAM1Q9Y4F4 1720 aa34.45■■■■□ 3.11
SSBP3-204ENST00000371320 FIBPO43427 364 aa34.45■■■■□ 3.1
SSBP3-204ENST00000371320 CSPP1Q1MSJ5 1256 aa34.45■■■■□ 3.1
SSBP3-204ENST00000371320 VSIG10Q8N0Z9 540 aa34.45■■■■□ 3.1
SSBP3-204ENST00000371320 KIF6Q6ZMV9 814 aa34.44■■■■□ 3.1
SSBP3-204ENST00000371320 DNAJC10Q8IXB1 793 aa34.44■■■■□ 3.1
SSBP3-204ENST00000371320 PDCP20941 246 aa34.43■■■■□ 3.1
SSBP3-204ENST00000371320 A0A1B0GUL7 405 aa34.43■■■■□ 3.1
SSBP3-204ENST00000371320 TRIM28Q13263 835 aaKnown RBP34.43■■■■□ 3.1
SSBP3-204ENST00000371320 CCDC57Q2TAC2 916 aa34.43■■■■□ 3.1
SSBP3-204ENST00000371320 TICAM2Q86XR7 235 aa34.43■■■■□ 3.1
SSBP3-204ENST00000371320 PUS3Q9BZE2 481 aaKnown RBP34.43■■■■□ 3.1
SSBP3-204ENST00000371320 HELLSQ9NRZ9 838 aa34.43■■■■□ 3.1
SSBP3-204ENST00000371320 DNM1Q05193 864 aaKnown RBP34.42■■■■□ 3.1
SSBP3-204ENST00000371320 BTG4Q9NY30 223 aa34.42■■■■□ 3.1
SSBP3-204ENST00000371320 CYP21A2P08686 494 aa34.42■■■■□ 3.1
SSBP3-204ENST00000371320 CEP126Q9P2H0 1117 aa34.42■■■■□ 3.1
SSBP3-204ENST00000371320 STARD3NLO95772 234 aa34.41■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms