RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 SUCLG2Q96I99 432 aa18.85■□□□□ 0.61
SYNCRIP-202ENST00000369622 SLC39A6Q13433 755 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 KSR2Q6VAB6 950 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 NEK11Q8NG66 645 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 CCDC171Q6TFL3 1326 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 EPB41L2O43491 1005 aaKnown RBP18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 AKAP4Q5JQC9 854 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 CKAP2LQ8IYA6 745 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 CHRM1P11229 460 aaPredicted RBP18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 C10orf67Q8IYJ2 551 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 ZSWIM6Q9HCJ5 1215 aa18.84■□□□□ 0.61
SYNCRIP-202ENST00000369622 KDM4AO75164 1064 aa18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 UVSSAQ2YD98 709 aa18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 CDC37L1Q7L3B6 337 aa18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 CCDC112Q8NEF3 446 aa18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 ZSCAN31Q96LW9 406 aaPredicted RBP18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 HDAC5Q9UQL6 1122 aa18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 TAF6LQ9Y6J9 622 aa18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 DIP2AQ14689 1571 aa18.83■□□□□ 0.61
SYNCRIP-202ENST00000369622 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 TRIM66O15016 1216 aa18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 RNMTO43148 476 aaKnown RBP18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 GIGYF1O75420 1035 aaPredicted RBP18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 ERC1Q8IUD2 1116 aa18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 DRC7Q8IY82 874 aa18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 TMEM87AQ8NBN3 555 aa18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.6
SYNCRIP-202ENST00000369622 A0A0D9SFI3 127 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 GRM8O00222 908 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 SASH1O94885 1247 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 FOSBP53539 338 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 BLOC1S2Q6QNY1 142 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 NECTIN1Q15223 517 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 TOPAZ1Q8N9V7 1692 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 FMN2Q9NZ56 1722 aa18.82■□□□□ 0.6
SYNCRIP-202ENST00000369622 CEMIPQ8WUJ3 1361 aa18.81■□□□□ 0.6
SYNCRIP-202ENST00000369622 POLR3GO15318 223 aaPredicted RBP18.81■□□□□ 0.6
SYNCRIP-202ENST00000369622 ST3GAL1Q11201 340 aa18.81■□□□□ 0.6
SYNCRIP-202ENST00000369622 PIK3C2AO00443 1686 aa18.81■□□□□ 0.6
SYNCRIP-202ENST00000369622 SLC27A2O14975 620 aa18.81■□□□□ 0.6
SYNCRIP-202ENST00000369622 KRT85P78386 507 aa18.81■□□□□ 0.6
SYNCRIP-202ENST00000369622 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 HOXB7P09629 217 aa18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 TTC6Q86TZ1 520 aa18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 NOL10Q9BSC4 688 aaKnown RBP18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 CEBPZQ03701 1054 aaKnown RBP18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 ELF2Q15723 593 aa18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 NRBP1Q9UHY1 535 aa18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 FAM208AQ9UK61 1670 aaKnown RBP18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 PXDNLA1KZ92 1463 aa18.8■□□□□ 0.6
SYNCRIP-202ENST00000369622 ALDH1L1O75891 902 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 CCDC192P0DO97 292 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 LIG1P18858 919 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 PSMA5P28066 241 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 CHGBP05060 677 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 HSP90B1P14625 803 aaKnown RBP18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 RBM6P78332 1123 aaKnown RBP18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 FBXO38Q6PIJ6 1188 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 CCDC186Q7Z3E2 898 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 DDX11Q96FC9 970 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 ZNF215Q9UL58 517 aaPredicted RBP18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 ZNF589Q86UQ0 364 aaPredicted RBP18.79■□□□□ 0.6
SYNCRIP-202ENST00000369622 TPD52L1Q16890 204 aaPredicted RBP18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 LARP1Q6PKG0 1096 aaKnown RBP18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 LUZP1Q86V48 1076 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 LINS1Q8NG48 757 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 GCP02774 474 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 GPATCH11Q8N954 259 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 MAP4K1Q92918 833 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 KAZALD1Q96I82 304 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 NUP62CLQ9H1M0 184 aa18.78■□□□□ 0.6
SYNCRIP-202ENST00000369622 ZC3H6P61129 1189 aaKnown RBP18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 SPATA32Q96LK8 384 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 ORAI2Q96SN7 254 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 MYD88Q99836 296 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 DACT1Q9NYF0 836 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 KCNG1Q9UIX4 513 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 NWD1Q149M9 1564 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 GTF2A1P52655 376 aaPredicted RBP18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 NEXNQ0ZGT2 675 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 MTX1Q13505 466 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 KCNH5Q8NCM2 988 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 BICD2Q8TD16 824 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 TM6SF1Q9BZW5 370 aa18.77■□□□□ 0.6
SYNCRIP-202ENST00000369622 SMTNL1A8MU46 457 aa18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 TNMDQ9H2S6 317 aa18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 BRD2P25440 801 aaKnown RBP18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 MAP3K11Q16584 847 aa18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 CCDC129Q6ZRS4 1044 aa18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 RNF216Q9NWF9 866 aaPredicted RBP18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 LCMT1Q9UIC8 334 aa18.76■□□□□ 0.59
SYNCRIP-202ENST00000369622 USP42Q9H9J4 1324 aaKnown RBP18.75■□□□□ 0.59
SYNCRIP-202ENST00000369622 SYT10Q6XYQ8 523 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms