RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 GPLD1P80108 840 aa7.46□□□□□ -1.22
ECHDC1-201ENST00000368287 TSEN2Q8NCE0 465 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-201ENST00000368287 ALG2Q9H553 416 aa7.46□□□□□ -1.22
ECHDC1-201ENST00000368287 STOML1Q9UBI4 398 aa7.46□□□□□ -1.22
ECHDC1-201ENST00000368287 C21orf2O43822 256 aa7.45□□□□□ -1.22
ECHDC1-201ENST00000368287 EIF2AK2P19525 551 aaKnown RBP7.45□□□□□ -1.22
ECHDC1-201ENST00000368287 GRIK1P39086 918 aa7.45□□□□□ -1.22
ECHDC1-201ENST00000368287 STAG2Q8N3U4 1231 aa7.45□□□□□ -1.22
ECHDC1-201ENST00000368287 DCAF11Q8TEB1 546 aa7.45□□□□□ -1.22
ECHDC1-201ENST00000368287 C2orf49Q9BVC5 232 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-201ENST00000368287 ZFATQ9P243 1243 aa7.45□□□□□ -1.22
ECHDC1-201ENST00000368287 RARAP10276 462 aa7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 RTN1Q16799 776 aa7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 Q6ZS46 218 aa7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 HFE2Q6ZVN8 426 aa7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 AGGF1Q8N302 714 aaeCLIP7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 CHMP7Q8WUX9 453 aaPredicted RBP7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 RBM19Q9Y4C8 960 aaKnown RBP7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
ECHDC1-201ENST00000368287 SPINK2P20155 84 aa7.43□□□□□ -1.22
ECHDC1-201ENST00000368287 INTS5Q6P9B9 1019 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-201ENST00000368287 LARGE2Q8N3Y3 721 aa7.43□□□□□ -1.22
ECHDC1-201ENST00000368287 OGFOD1Q8N543 542 aa7.43□□□□□ -1.22
ECHDC1-201ENST00000368287 SRA1Q9HD15 236 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-201ENST00000368287 DMGDHQ9UI17 866 aaKnown RBP7.43□□□□□ -1.22
ECHDC1-201ENST00000368287 ARID1BQ8NFD5 2236 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 PALM3A6NDB9 673 aaPredicted RBP7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 DHX15O43143 795 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 ADAMTS4O75173 837 aa7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 TARSP26639 723 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 ZDHHC13Q8IUH4 622 aa7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 PLEKHM2Q8IWE5 1019 aa7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 SCG3Q8WXD2 468 aaKnown RBP7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 BCS1LQ9Y276 419 aa7.42□□□□□ -1.22
ECHDC1-201ENST00000368287 USP17L3A6NCW0 530 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 USP17L4A6NCW7 530 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 SASH3O75995 380 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 IDH3AP50213 366 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 GDF6Q6KF10 455 aaPredicted RBP7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 USP17L2Q6R6M4 530 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 USP17L1Q7RTZ2 530 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 MAP4K3Q8IVH8 894 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 GAS2L2Q8NHY3 880 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
ECHDC1-201ENST00000368287 WNT11O96014 354 aa7.4□□□□□ -1.22
ECHDC1-201ENST00000368287 INPP5BP32019 993 aa7.4□□□□□ -1.22
ECHDC1-201ENST00000368287 NRLP54845 237 aa7.4□□□□□ -1.22
ECHDC1-201ENST00000368287 NFIAQ12857 509 aa7.4□□□□□ -1.22
ECHDC1-201ENST00000368287 SIX5Q8N196 739 aa7.4□□□□□ -1.22
ECHDC1-201ENST00000368287 IL22RA1Q8N6P7 574 aa7.4□□□□□ -1.22
ECHDC1-201ENST00000368287 PLD4Q96BZ4 506 aa7.4□□□□□ -1.22
ECHDC1-201ENST00000368287 ARSDP51689 593 aa7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 TMEM132AQ24JP5 1023 aa7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 DTX1Q86Y01 620 aa7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 WWC1Q8IX03 1113 aa7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 UBL7Q96S82 380 aaPredicted RBP7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 C11orf16Q9NQ32 467 aa7.39□□□□□ -1.23
ECHDC1-201ENST00000368287 JAG1P78504 1218 aa7.38□□□□□ -1.23
ECHDC1-201ENST00000368287 SETDB1Q15047 1291 aa7.38□□□□□ -1.23
ECHDC1-201ENST00000368287 J3QW42 95 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 GHRHP01286 108 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 RASA1P20936 1047 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 ARMC10Q8N2F6 343 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 UTP4Q969X6 686 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 CEP41Q9BYV8 373 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 C7orf69Q9H7B7 122 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 TLR7Q9NYK1 1049 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 KLK14Q9P0G3 267 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 MKRN1Q9UHC7 482 aaKnown RBP7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 ADGRE2Q9UHX3 823 aa7.37□□□□□ -1.23
ECHDC1-201ENST00000368287 MCM6Q14566 821 aa7.36□□□□□ -1.23
ECHDC1-201ENST00000368287 DBNDD2Q9BQY9 259 aa7.36□□□□□ -1.23
ECHDC1-201ENST00000368287 RBSNQ9H1K0 784 aa7.36□□□□□ -1.23
ECHDC1-201ENST00000368287 COG6Q9Y2V7 657 aa7.36□□□□□ -1.23
ECHDC1-201ENST00000368287 LOC102724428A0A0B4J2F2 783 aa7.35□□□□□ -1.23
ECHDC1-201ENST00000368287 SIK1P57059 783 aa7.35□□□□□ -1.23
ECHDC1-201ENST00000368287 UVSSAQ2YD98 709 aa7.35□□□□□ -1.23
ECHDC1-201ENST00000368287 RNF43Q68DV7 783 aa7.35□□□□□ -1.23
ECHDC1-201ENST00000368287 TRIM42Q8IWZ5 723 aa7.35□□□□□ -1.23
ECHDC1-201ENST00000368287 PRR19A6NJB7 356 aa7.34□□□□□ -1.23
ECHDC1-201ENST00000368287 DKK1O94907 266 aa7.34□□□□□ -1.23
ECHDC1-201ENST00000368287 PSAPP07602 524 aa7.34□□□□□ -1.23
ECHDC1-201ENST00000368287 ACAD11Q709F0 780 aa7.34□□□□□ -1.23
ECHDC1-201ENST00000368287 NSUN5Q96P11 429 aaKnown RBP7.34□□□□□ -1.23
ECHDC1-201ENST00000368287 MUC3BQ9H195 1237 aa7.34□□□□□ -1.23
ECHDC1-201ENST00000368287 HMX2A2RU54 273 aa7.33□□□□□ -1.24
ECHDC1-201ENST00000368287 ATP9BO43861 1147 aa7.33□□□□□ -1.24
ECHDC1-201ENST00000368287 MICAL2O94851 1124 aa7.33□□□□□ -1.24
ECHDC1-201ENST00000368287 SEC13P55735 322 aa7.33□□□□□ -1.24
ECHDC1-201ENST00000368287 DGKZQ13574 1117 aa7.33□□□□□ -1.24
ECHDC1-201ENST00000368287 OGFOD2Q6N063 350 aa7.33□□□□□ -1.24
ECHDC1-201ENST00000368287 WISP1O95388 367 aa7.32□□□□□ -1.24
ECHDC1-201ENST00000368287 CACTIN-AS1Q8N1I8 211 aa7.32□□□□□ -1.24
ECHDC1-201ENST00000368287 HINFPQ9BQA5 517 aa7.32□□□□□ -1.24
ECHDC1-201ENST00000368287 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms