RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 CCAR1Q8IX12 1150 aaKnown RBP12.99□□□□□ -0.33
NECTIN4-201ENST00000368012 GOLIM4O00461 696 aa12.99□□□□□ -0.33
NECTIN4-201ENST00000368012 ZNF589Q86UQ0 364 aaPredicted RBP12.99□□□□□ -0.33
NECTIN4-201ENST00000368012 ERC1Q8IUD2 1116 aa12.99□□□□□ -0.33
NECTIN4-201ENST00000368012 CPLX1O14810 134 aa12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 NEK1Q96PY6 1258 aa12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 RPAP1Q9BWH6 1393 aaPredicted RBP12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 COPS6Q7L5N1 327 aa12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 TTC5Q8N0Z6 440 aa12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 KCNF1Q9H3M0 494 aa12.98□□□□□ -0.33
NECTIN4-201ENST00000368012 GRM8O00222 908 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 EIF4A1P60842 406 aaKnown RBP12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 PTPN14Q15678 1187 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 LEO1Q8WVC0 666 aaPredicted RBP12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 MAP3K5Q99683 1374 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 SKILP12757 684 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 TAF7LQ5H9L4 462 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 FSIP1Q8NA03 581 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 KIAA1524Q8TCG1 905 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 HDAC5Q9UQL6 1122 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 MRVI1Q9Y6F6 885 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 KCNA6P17658 529 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 STK38Q15208 465 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 PLCD3Q8N3E9 789 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 XAGE3Q8WTP9 111 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 TTC14Q96N46 770 aa12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 CLTCQ00610 1675 aaKnown RBP12.97□□□□□ -0.33
NECTIN4-201ENST00000368012 ANKRD1Q15327 319 aa12.96□□□□□ -0.33
NECTIN4-201ENST00000368012 TPM3P06753 285 aa12.96□□□□□ -0.33
NECTIN4-201ENST00000368012 TIMM10P62072 90 aa12.96□□□□□ -0.33
NECTIN4-201ENST00000368012 AOPEPQ8N6M6 819 aa12.96□□□□□ -0.33
NECTIN4-201ENST00000368012 PDILTQ8N807 584 aa12.96□□□□□ -0.33
NECTIN4-201ENST00000368012 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.33
NECTIN4-201ENST00000368012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.96□□□□□ -0.33
NECTIN4-201ENST00000368012 A0A1B0GVL5 298 aa12.96□□□□□ -0.34
NECTIN4-201ENST00000368012 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.34
NECTIN4-201ENST00000368012 TFCP2Q12800 502 aa12.96□□□□□ -0.34
NECTIN4-201ENST00000368012 CEP135Q66GS9 1140 aa12.96□□□□□ -0.34
NECTIN4-201ENST00000368012 CCDC144CPQ8IYA2 1237 aa12.96□□□□□ -0.34
NECTIN4-201ENST00000368012 CCDC82Q8N4S0 544 aa12.96□□□□□ -0.34
NECTIN4-201ENST00000368012 A0A087WZG4 1122 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 NRDCO43847 1150 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 CDK11BP21127 795 aaKnown RBP12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 ZSWIM6Q9HCJ5 1215 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 REREQ9P2R6 1566 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 CHMP4CQ96CF2 233 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 DBNDD2Q9BQY9 259 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 USP6P35125 1406 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 HIP1O00291 1037 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 CFAP45Q9UL16 551 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
NECTIN4-201ENST00000368012 SYNE3Q6ZMZ3 975 aa12.94□□□□□ -0.34
NECTIN4-201ENST00000368012 DDX19AQ9NUU7 478 aaKnown RBP12.94□□□□□ -0.34
NECTIN4-201ENST00000368012 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
NECTIN4-201ENST00000368012 NFATC2IPQ8NCF5 419 aa12.94□□□□□ -0.34
NECTIN4-201ENST00000368012 SASH1O94885 1247 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 RXRAP19793 462 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 ZNF75DP51815 510 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 DLC1Q96QB1 1528 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 TTC41PQ6P2S7 1318 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 SBNO1A3KN83 1393 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 CCDC69A6NI79 296 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 LMOD1P29536 600 aaPredicted RBP12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 MARCKSP29966 332 aaPredicted RBP12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
NECTIN4-201ENST00000368012 TCHHQ07283 1943 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 GJB4Q9NTQ9 266 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 OVOS2A0A0J9YW53 1432 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 OVOS2Q6IE36 1432 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 C11orf57Q6ZUT1 292 aaPredicted RBP12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 POLR3GO15318 223 aaPredicted RBP12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 NECTIN1Q15223 517 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 LMBR1LQ6UX01 489 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 CEP57L1Q8IYX8 460 aa12.92□□□□□ -0.34
NECTIN4-201ENST00000368012 CEP170BQ9Y4F5 1589 aaPredicted RBP12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 TNRQ92752 1358 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 PTPDC1A2A3K4 754 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 USP27XA6NNY8 438 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 SERPINC1P01008 464 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 ZNF594Q96JF6 807 aaPredicted RBP12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 GPHNQ9NQX3 736 aaPredicted RBP12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 POLA2Q14181 598 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 SKIDA1Q1XH10 827 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 LINS1Q8NG48 757 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 PGBD1Q96JS3 809 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms