RNA–Protein interactions for RNA: ENST00000367425.8

CFHR3-201, Transcript of complement factor H related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFHR3, Length 1,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-201ENST00000367425 CCDC155Q8N6L0 562 aa7.75□□□□□ -1.17
CFHR3-201ENST00000367425 NUCKS1Q9H1E3 243 aaKnown RBP7.75□□□□□ -1.17
CFHR3-201ENST00000367425 PLCB3Q01970 1234 aa7.74□□□□□ -1.17
CFHR3-201ENST00000367425 ALYREFQ86V81 257 aaKnown RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 COL25A1Q9BXS0 654 aaPredicted RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 KRTAP4-5Q9BYR2 181 aa7.74□□□□□ -1.17
CFHR3-201ENST00000367425 BRD7Q9NPI1 651 aa7.74□□□□□ -1.17
CFHR3-201ENST00000367425 RTCBQ9Y3I0 505 aaKnown RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 RBM47A0AV96 593 aaKnown RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 ATXN7O15265 892 aaPredicted RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 EAPPQ56P03 285 aaPredicted RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 ZNF326Q5BKZ1 582 aaKnown RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 GIPC2Q8TF65 315 aa7.74□□□□□ -1.17
CFHR3-201ENST00000367425 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 GMCL1Q96IK5 515 aa7.74□□□□□ -1.17
CFHR3-201ENST00000367425 ZCCHC2Q9C0B9 1178 aaKnown RBP7.74□□□□□ -1.17
CFHR3-201ENST00000367425 USP20Q9Y2K6 914 aa7.74□□□□□ -1.17
CFHR3-201ENST00000367425 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
CFHR3-201ENST00000367425 GPR182O15218 404 aa7.73□□□□□ -1.17
CFHR3-201ENST00000367425 NEFLP07196 543 aa7.73□□□□□ -1.17
CFHR3-201ENST00000367425 FAM157BP0CG42 384 aa7.73□□□□□ -1.17
CFHR3-201ENST00000367425 RANGAP1P46060 587 aaPredicted RBP7.73□□□□□ -1.17
CFHR3-201ENST00000367425 TRIM22Q8IYM9 498 aa7.73□□□□□ -1.17
CFHR3-201ENST00000367425 KRTAP4-11Q9BYQ6 195 aa7.73□□□□□ -1.17
CFHR3-201ENST00000367425 GGNBP2Q9H3C7 697 aa7.73□□□□□ -1.17
CFHR3-201ENST00000367425 ZFP64Q9NPA5 681 aa7.73□□□□□ -1.17
CFHR3-201ENST00000367425 UBAP1LF5GYI3 381 aa7.72□□□□□ -1.17
CFHR3-201ENST00000367425 FMR1Q06787 632 aaKnown RBP eCLIP7.72□□□□□ -1.17
CFHR3-201ENST00000367425 FZD5Q13467 585 aa7.72□□□□□ -1.17
CFHR3-201ENST00000367425 DSC3Q14574 896 aa7.72□□□□□ -1.17
CFHR3-201ENST00000367425 KRTAP9-8Q9BYQ0 159 aa7.72□□□□□ -1.17
CFHR3-201ENST00000367425 NIF3L1Q9GZT8 377 aa7.72□□□□□ -1.17
CFHR3-201ENST00000367425 KCNH4Q9UQ05 1017 aa7.72□□□□□ -1.17
CFHR3-201ENST00000367425 KHNYNO15037 678 aaKnown RBP7.71□□□□□ -1.17
CFHR3-201ENST00000367425 IGHA2P01877 340 aa7.71□□□□□ -1.17
CFHR3-201ENST00000367425 P4HBP07237 508 aaKnown RBP7.71□□□□□ -1.17
CFHR3-201ENST00000367425 MAPK8P45983 427 aa7.71□□□□□ -1.17
CFHR3-201ENST00000367425 FGD1P98174 961 aa7.71□□□□□ -1.17
CFHR3-201ENST00000367425 FBXO33Q7Z6M2 555 aa7.71□□□□□ -1.17
CFHR3-201ENST00000367425 ZNF428Q96B54 188 aa7.71□□□□□ -1.17
CFHR3-201ENST00000367425 BCL11AQ9H165 835 aa7.71□□□□□ -1.17
CFHR3-201ENST00000367425 C11orf16Q9NQ32 467 aa7.71□□□□□ -1.17
CFHR3-201ENST00000367425 DCDC2BA2VCK2 349 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 A6NHS1 94 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 ITGA6P23229 1130 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 DBN1Q16643 649 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 ZNF438Q7Z4V0 828 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 CUEDC1Q9NWM3 386 aaPredicted RBP7.7□□□□□ -1.18
CFHR3-201ENST00000367425 KCNMB2Q9Y691 235 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 XYLBO75191 536 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 ZNF16P17020 682 aaPredicted RBP7.7□□□□□ -1.18
CFHR3-201ENST00000367425 KCNQ4P56696 695 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 ATP2B2Q01814 1243 aa7.7□□□□□ -1.18
CFHR3-201ENST00000367425 TRIP4Q15650 581 aaPredicted RBP7.7□□□□□ -1.18
CFHR3-201ENST00000367425 PDE12Q6L8Q7 609 aaKnown RBP7.7□□□□□ -1.18
CFHR3-201ENST00000367425 EFSO43281 561 aa7.69□□□□□ -1.18
CFHR3-201ENST00000367425 THBS1P07996 1170 aa7.69□□□□□ -1.18
CFHR3-201ENST00000367425 TNP2Q05952 138 aa7.69□□□□□ -1.18
CFHR3-201ENST00000367425 FOXR1Q6PIV2 292 aa7.69□□□□□ -1.18
CFHR3-201ENST00000367425 XKR5Q6UX68 686 aa7.69□□□□□ -1.18
CFHR3-201ENST00000367425 ZNF837Q96EG3 531 aaPredicted RBP7.69□□□□□ -1.18
CFHR3-201ENST00000367425 PHF24Q9UPV7 400 aa7.69□□□□□ -1.18
CFHR3-201ENST00000367425 E9PSI1 815 aa7.68□□□□□ -1.18
CFHR3-201ENST00000367425 EGFRP00533 1210 aa7.68□□□□□ -1.18
CFHR3-201ENST00000367425 LDHBP07195 334 aaKnown RBP7.68□□□□□ -1.18
CFHR3-201ENST00000367425 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
CFHR3-201ENST00000367425 GRNP28799 593 aaKnown RBP7.68□□□□□ -1.18
CFHR3-201ENST00000367425 SFSWAPQ12872 951 aaKnown RBP7.68□□□□□ -1.18
CFHR3-201ENST00000367425 UBAP2LQ14157 1087 aaKnown RBP7.68□□□□□ -1.18
CFHR3-201ENST00000367425 GTPBP3Q969Y2 492 aaKnown RBP7.68□□□□□ -1.18
CFHR3-201ENST00000367425 PNMA6FA0A0J9YX94 578 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 CDC14CA4D256 554 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 PAX4O43316 350 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 BNIP3LO60238 219 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 SNX29Q8TEQ0 813 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 CSRNP1Q96S65 589 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 ELP3Q9H9T3 547 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 MARK1Q9P0L2 795 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 ATXN7L1Q9ULK2 861 aaPredicted RBP7.67□□□□□ -1.18
CFHR3-201ENST00000367425 CCINQ13939 588 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 ENOX2Q16206 610 aaKnown RBP7.67□□□□□ -1.18
CFHR3-201ENST00000367425 NLRP13Q86W25 1043 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 ABHD17AQ96GS6 310 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 DNAJC25Q9H1X3 360 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 NDFIP2Q9NV92 336 aa7.67□□□□□ -1.18
CFHR3-201ENST00000367425 CPNE3O75131 537 aaKnown RBP7.66□□□□□ -1.18
CFHR3-201ENST00000367425 TNFRSF21O75509 655 aa7.66□□□□□ -1.18
CFHR3-201ENST00000367425 ORC1Q13415 861 aa7.66□□□□□ -1.18
CFHR3-201ENST00000367425 ALG1LQ6GMV1 187 aa7.66□□□□□ -1.18
CFHR3-201ENST00000367425 SV2AQ7L0J3 742 aa7.66□□□□□ -1.18
CFHR3-201ENST00000367425 PNMA5Q96PV4 448 aa7.66□□□□□ -1.18
CFHR3-201ENST00000367425 CFHR5Q9BXR6 569 aa7.66□□□□□ -1.18
CFHR3-201ENST00000367425 EIF1AYO14602 144 aaKnown RBP7.65□□□□□ -1.18
CFHR3-201ENST00000367425 PHACTR2O75167 634 aa7.65□□□□□ -1.18
CFHR3-201ENST00000367425 PRPF40AO75400 957 aaKnown RBP7.65□□□□□ -1.18
CFHR3-201ENST00000367425 TAGLNQ01995 201 aaKnown RBP7.65□□□□□ -1.18
CFHR3-201ENST00000367425 ARTNQ5T4W7 220 aa7.65□□□□□ -1.18
CFHR3-201ENST00000367425 TTC39BQ5VTQ0 682 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms