RNA–Protein interactions for RNA: ENST00000367402.6

NUP43-202, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-202ENST00000367402 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
NUP43-202ENST00000367402 ZBTB38Q8NAP3 1195 aaPredicted RBP12.54□□□□□ -0.4
NUP43-202ENST00000367402 LINS1Q8NG48 757 aa12.54□□□□□ -0.4
NUP43-202ENST00000367402 JARID2Q92833 1246 aaPredicted RBP12.54□□□□□ -0.4
NUP43-202ENST00000367402 NLRP3Q96P20 1036 aa12.54□□□□□ -0.4
NUP43-202ENST00000367402 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
NUP43-202ENST00000367402 ABCC12Q96J65 1359 aa12.54□□□□□ -0.4
NUP43-202ENST00000367402 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
NUP43-202ENST00000367402 NUP98P52948 1817 aa12.53□□□□□ -0.4
NUP43-202ENST00000367402 KLRG2A4D1S0 409 aaPredicted RBP12.53□□□□□ -0.4
NUP43-202ENST00000367402 BCAR3O75815 825 aa12.53□□□□□ -0.4
NUP43-202ENST00000367402 PCCAP05165 728 aaPredicted RBP12.53□□□□□ -0.4
NUP43-202ENST00000367402 SRGNP10124 158 aa12.53□□□□□ -0.4
NUP43-202ENST00000367402 YBX3P16989 372 aaKnown RBP eCLIP12.53□□□□□ -0.41e-8■□□□□ 10.1
NUP43-202ENST00000367402 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
NUP43-202ENST00000367402 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
NUP43-202ENST00000367402 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
NUP43-202ENST00000367402 PCDH10Q9P2E7 1040 aa12.53□□□□□ -0.4
NUP43-202ENST00000367402 IRS4O14654 1257 aaPredicted RBP12.52□□□□□ -0.41
NUP43-202ENST00000367402 NPR1P16066 1061 aa12.52□□□□□ -0.41
NUP43-202ENST00000367402 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
NUP43-202ENST00000367402 GCKRQ14397 625 aa12.52□□□□□ -0.41
NUP43-202ENST00000367402 STYK1Q6J9G0 422 aa12.52□□□□□ -0.41
NUP43-202ENST00000367402 TTLL6Q8N841 843 aa12.52□□□□□ -0.41
NUP43-202ENST00000367402 RPGRQ92834 1020 aaKnown RBP12.52□□□□□ -0.41
NUP43-202ENST00000367402 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.41
NUP43-202ENST00000367402 AFDNP55196 1824 aaKnown RBP12.52□□□□□ -0.41
NUP43-202ENST00000367402 IPO8O15397 1037 aaKnown RBP12.51□□□□□ -0.41
NUP43-202ENST00000367402 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
NUP43-202ENST00000367402 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
NUP43-202ENST00000367402 C3orf67Q6ZVT6 689 aa12.51□□□□□ -0.41
NUP43-202ENST00000367402 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
NUP43-202ENST00000367402 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
NUP43-202ENST00000367402 API5Q9BZZ5 524 aaKnown RBP12.51□□□□□ -0.41
NUP43-202ENST00000367402 SRCIN1Q9C0H9 1055 aa12.51□□□□□ -0.41
NUP43-202ENST00000367402 KIF16BQ96L93 1317 aa12.51□□□□□ -0.41
NUP43-202ENST00000367402 H7C1W4 665 aa12.5□□□□□ -0.41
NUP43-202ENST00000367402 ALDH1L1O75891 902 aa12.5□□□□□ -0.41
NUP43-202ENST00000367402 ALDH1B1P30837 517 aa12.5□□□□□ -0.41
NUP43-202ENST00000367402 CRY2Q49AN0 593 aa12.5□□□□□ -0.41
NUP43-202ENST00000367402 UBE3BQ7Z3V4 1068 aa12.5□□□□□ -0.41
NUP43-202ENST00000367402 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
NUP43-202ENST00000367402 ARFGEF2Q9Y6D5 1785 aa12.5□□□□□ -0.41
NUP43-202ENST00000367402 KIF13BQ9NQT8 1826 aa12.49□□□□□ -0.41
NUP43-202ENST00000367402 PRPF40BQ6NWY9 871 aaKnown RBP12.49□□□□□ -0.41
NUP43-202ENST00000367402 C9orf78Q9NZ63 289 aaPredicted RBP12.49□□□□□ -0.41
NUP43-202ENST00000367402 N4BP2Q86UW6 1770 aaPredicted RBP12.48□□□□□ -0.41
NUP43-202ENST00000367402 RIC1Q4ADV7 1423 aa12.48□□□□□ -0.41
NUP43-202ENST00000367402 CDHR2Q9BYE9 1310 aa12.48□□□□□ -0.41
NUP43-202ENST00000367402 PDE8AO60658 829 aa12.48□□□□□ -0.41
NUP43-202ENST00000367402 ARHGAP27Q6ZUM4 889 aa12.48□□□□□ -0.41
NUP43-202ENST00000367402 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
NUP43-202ENST00000367402 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
NUP43-202ENST00000367402 GRM8O00222 908 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 C21orf2O43822 256 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 SEC24BO95487 1268 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 HOXA10P31260 410 aaPredicted RBP12.47□□□□□ -0.41
NUP43-202ENST00000367402 CCT4P50991 539 aaKnown RBP12.47□□□□□ -0.41
NUP43-202ENST00000367402 SF3B3Q15393 1217 aaKnown RBP12.47□□□□□ -0.41
NUP43-202ENST00000367402 ZKSCAN2Q63HK3 967 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 ATF7IPQ6VMQ6 1270 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 CCDC85AQ96PX6 553 aaPredicted RBP12.47□□□□□ -0.41
NUP43-202ENST00000367402 CRAMP1Q96RY5 1269 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 RCAN3Q9UKA8 241 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 ANKRD36CQ5JPF3 1778 aa12.47□□□□□ -0.41
NUP43-202ENST00000367402 KIAA1551Q9HCM1 1747 aa12.46□□□□□ -0.41
NUP43-202ENST00000367402 TRIM27P14373 513 aa12.46□□□□□ -0.41
NUP43-202ENST00000367402 CASP7P55210 303 aa12.46□□□□□ -0.41
NUP43-202ENST00000367402 CCDC152Q4G0S7 254 aa12.46□□□□□ -0.41
NUP43-202ENST00000367402 CLUAP1Q96AJ1 413 aa12.46□□□□□ -0.41
NUP43-202ENST00000367402 ANKRD31Q8N7Z5 1873 aa12.46□□□□□ -0.42
NUP43-202ENST00000367402 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
NUP43-202ENST00000367402 ABCC4O15439 1325 aa12.45□□□□□ -0.42
NUP43-202ENST00000367402 PPEF1O14829 653 aaPredicted RBP12.45□□□□□ -0.42
NUP43-202ENST00000367402 NBPF7P0C2Y1 421 aaPredicted RBP12.45□□□□□ -0.42
NUP43-202ENST00000367402 CTSWP56202 376 aa12.45□□□□□ -0.42
NUP43-202ENST00000367402 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
NUP43-202ENST00000367402 TMX4Q9H1E5 349 aaPredicted RBP12.45□□□□□ -0.42
NUP43-202ENST00000367402 TNNQ9UQP3 1299 aa12.45□□□□□ -0.42
NUP43-202ENST00000367402 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
NUP43-202ENST00000367402 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 BBOX1O75936 387 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 GRAPQ13588 217 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 FTSJ3Q8IY81 847 aaKnown RBP12.44□□□□□ -0.42
NUP43-202ENST00000367402 TTLL11Q8NHH1 800 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
NUP43-202ENST00000367402 PLA2G12BQ9BX93 195 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 USP44Q9H0E7 712 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 SEC31BQ9NQW1 1179 aa12.44□□□□□ -0.42
NUP43-202ENST00000367402 GOLGB1Q14789 3259 aaKnown RBP12.44□□□□□ -0.42
NUP43-202ENST00000367402 CCDC93Q567U6 631 aa12.43□□□□□ -0.42
NUP43-202ENST00000367402 INTS3Q68E01 1043 aaKnown RBP12.43□□□□□ -0.42
NUP43-202ENST00000367402 OLFM4Q6UX06 510 aa12.43□□□□□ -0.42
NUP43-202ENST00000367402 C7orf43Q8WVR3 580 aa12.43□□□□□ -0.42
NUP43-202ENST00000367402 CELF1Q92879 486 aaKnown RBP12.43□□□□□ -0.42
NUP43-202ENST00000367402 GREM2Q9H772 168 aa12.43□□□□□ -0.42
NUP43-202ENST00000367402 CHMP3Q9Y3E7 222 aa12.43□□□□□ -0.42
NUP43-202ENST00000367402 PCDHB13Q9Y5F0 798 aa12.43□□□□□ -0.42
NUP43-202ENST00000367402 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms