RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 NLRP5P59047 1200 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 HSP90AA4PQ58FG1 418 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 YTHDC2Q9H6S0 1430 aaKnown RBP13.25□□□□□ -0.29
RD3-201ENST00000367002 IL15P40933 162 aaPredicted RBP13.25□□□□□ -0.29
RD3-201ENST00000367002 UBASH3AP57075 661 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 MFSD6Q6ZSS7 791 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 CHST3Q7LGC8 479 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 ZNF397Q8NF99 534 aaPredicted RBP13.25□□□□□ -0.29
RD3-201ENST00000367002 ALG1Q9BT22 464 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 ZNF652Q9Y2D9 606 aa13.25□□□□□ -0.29
RD3-201ENST00000367002 MARCKSP29966 332 aaPredicted RBP13.24□□□□□ -0.29
RD3-201ENST00000367002 SPA17Q15506 151 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 CATIPQ7Z7H3 387 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 NUP88Q99567 741 aaPredicted RBP13.24□□□□□ -0.29
RD3-201ENST00000367002 PNMA6EA0A0J9YXQ4 647 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 CCDC194A0A1B0GVG4 234 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 AOPEPQ8N6M6 819 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 ZSWIM4Q9H7M6 989 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
RD3-201ENST00000367002 ZBTB43O43298 467 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
RD3-201ENST00000367002 FAM173BQ6P4H8 233 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 ZSCAN29Q8IWY8 852 aaPredicted RBP13.24□□□□□ -0.29
RD3-201ENST00000367002 TRMT2AQ8IZ69 625 aaKnown RBP13.24□□□□□ -0.29
RD3-201ENST00000367002 CCDC171Q6TFL3 1326 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 MAGI3Q5TCQ9 1506 aa13.24□□□□□ -0.29
RD3-201ENST00000367002 ERLIN2O94905 339 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 ATP2B3Q16720 1220 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 CCDC150Q8NCX0 1101 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
RD3-201ENST00000367002 ABCC10Q5T3U5 1492 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 DTNBO60941 627 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 PTGS1P23219 599 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 LUZP1Q86V48 1076 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 ABCC1P33527 1531 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 KIAA0754O94854 1291 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 TEX13AQ9BXU3 409 aaPredicted RBP13.23□□□□□ -0.29
RD3-201ENST00000367002 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
RD3-201ENST00000367002 DZIP1Q86YF9 867 aaKnown RBP13.22□□□□□ -0.29
RD3-201ENST00000367002 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 ZNF445P59923 1031 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 FKBP15Q5T1M5 1219 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 ZNF444Q8N0Y2 327 aaPredicted RBP13.22□□□□□ -0.29
RD3-201ENST00000367002 PAG1Q9NWQ8 432 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 MAP3K5Q99683 1374 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 SGSM2O43147 1006 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 APOBRQ0VD83 1088 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 SLC9C2Q5TAH2 1124 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 DHX32Q7L7V1 743 aaKnown RBP13.22□□□□□ -0.29
RD3-201ENST00000367002 LMBRD1Q9NUN5 540 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 DNAI1Q9UI46 699 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 SPTLC2O15270 562 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 UBA7P41226 1012 aa13.22□□□□□ -0.29
RD3-201ENST00000367002 GOLGA6L9A6NEM1 432 aa13.21□□□□□ -0.29
RD3-201ENST00000367002 YEATS4O95619 227 aa13.21□□□□□ -0.29
RD3-201ENST00000367002 RBM5P52756 815 aaKnown RBP eCLIP13.21□□□□□ -0.29
RD3-201ENST00000367002 CACNA2D4Q7Z3S7 1137 aa13.21□□□□□ -0.29
RD3-201ENST00000367002 TAF4BQ92750 862 aa13.21□□□□□ -0.29
RD3-201ENST00000367002 SEC63Q9UGP8 760 aaKnown RBP13.21□□□□□ -0.29
RD3-201ENST00000367002 KAT6BQ8WYB5 2073 aa13.21□□□□□ -0.29
RD3-201ENST00000367002 PRC1O43663 620 aa13.21□□□□□ -0.29
RD3-201ENST00000367002 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
RD3-201ENST00000367002 BMS1Q14692 1282 aaKnown RBP13.21□□□□□ -0.29
RD3-201ENST00000367002 KANK3Q6NY19 840 aa13.21□□□□□ -0.29
RD3-201ENST00000367002 BICC1Q9H694 974 aaKnown RBP13.21□□□□□ -0.29
RD3-201ENST00000367002 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
RD3-201ENST00000367002 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.21□□□□□ -0.29
RD3-201ENST00000367002 V9GYY5 206 aaPredicted RBP13.21□□□□□ -0.29
RD3-201ENST00000367002 ZNF521Q96K83 1311 aa13.21□□□□□ -0.3
RD3-201ENST00000367002 PTPDC1A2A3K4 754 aa13.21□□□□□ -0.3
RD3-201ENST00000367002 N4BP3O15049 544 aa13.21□□□□□ -0.3
RD3-201ENST00000367002 HOXC9P31274 260 aa13.21□□□□□ -0.3
RD3-201ENST00000367002 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.3
RD3-201ENST00000367002 MAGI2Q86UL8 1455 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 GCP02774 474 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
RD3-201ENST00000367002 EXOC5O00471 708 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 TFCP2Q12800 502 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 WTAPQ15007 396 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
RD3-201ENST00000367002 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 UQCRFS1P1P0C7P4 283 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 IDEP14735 1019 aa13.2□□□□□ -0.3
RD3-201ENST00000367002 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
RD3-201ENST00000367002 ENOX2Q16206 610 aaKnown RBP13.2□□□□□ -0.3
RD3-201ENST00000367002 DNA2P51530 1060 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 TSPY2A6NKD2 308 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 TAF3Q5VWG9 929 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 IQSEC3Q9UPP2 1182 aaPredicted RBP13.19□□□□□ -0.3
RD3-201ENST00000367002 GTF2F1P35269 517 aaKnown RBP eCLIP13.19□□□□□ -0.3
RD3-201ENST00000367002 AFMP43652 599 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
RD3-201ENST00000367002 TMEM63CQ9P1W3 806 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms