RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PERM1Q5SV97 790 aa5.7□□□□□ -1.5
RNU6-238P-201ENST00000363313 USP17L2Q6R6M4 530 aa5.7□□□□□ -1.5
RNU6-238P-201ENST00000363313 Q6ZS46 218 aa5.7□□□□□ -1.5
RNU6-238P-201ENST00000363313 DHX32Q7L7V1 743 aaKnown RBP5.7□□□□□ -1.5
RNU6-238P-201ENST00000363313 USP17L1Q7RTZ2 530 aa5.7□□□□□ -1.5
RNU6-238P-201ENST00000363313 MKRN1Q9UHC7 482 aaKnown RBP5.7□□□□□ -1.5
RNU6-238P-201ENST00000363313 ZBTB42B2RXF5 422 aa5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 PTCD1O75127 700 aaKnown RBP5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 COBLO75128 1261 aa5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 DEAF1O75398 565 aaPredicted RBP5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 EGFRP00533 1210 aa5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 CPB1P15086 417 aa5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 INTS5Q6P9B9 1019 aaKnown RBP5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 TSEN2Q8NCE0 465 aaKnown RBP5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 MUC3BQ9H195 1237 aa5.69□□□□□ -1.5
RNU6-238P-201ENST00000363313 F8W735 103 aaPredicted RBP5.68□□□□□ -1.5
RNU6-238P-201ENST00000363313 IGFBP4P22692 258 aa5.68□□□□□ -1.5
RNU6-238P-201ENST00000363313 SEC13P55735 322 aa5.68□□□□□ -1.5
RNU6-238P-201ENST00000363313 SCG3Q8WXD2 468 aaKnown RBP5.68□□□□□ -1.5
RNU6-238P-201ENST00000363313 HOXD8P13378 290 aaPredicted RBP5.67□□□□□ -1.5
RNU6-238P-201ENST00000363313 ARSDP51689 593 aa5.67□□□□□ -1.5
RNU6-238P-201ENST00000363313 ZFATQ9P243 1243 aa5.67□□□□□ -1.5
RNU6-238P-201ENST00000363313 BCS1LQ9Y276 419 aa5.67□□□□□ -1.5
RNU6-238P-201ENST00000363313 RAXQ9Y2V3 346 aa5.67□□□□□ -1.5
RNU6-238P-201ENST00000363313 RAD21O60216 631 aa5.66□□□□□ -1.5
RNU6-238P-201ENST00000363313 IGLV1-40P01703 118 aa5.66□□□□□ -1.5
RNU6-238P-201ENST00000363313 SSTR4P31391 388 aa5.66□□□□□ -1.5
RNU6-238P-201ENST00000363313 IFT43Q96FT9 208 aa5.66□□□□□ -1.5
RNU6-238P-201ENST00000363313 SMG9Q9H0W8 520 aaKnown RBP5.66□□□□□ -1.5
RNU6-238P-201ENST00000363313 TLR7Q9NYK1 1049 aaKnown RBP5.66□□□□□ -1.5
RNU6-238P-201ENST00000363313 RARAP10276 462 aa5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 TAL1P17542 331 aaPredicted RBP5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 GRNP28799 593 aaKnown RBP5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 SOX18P35713 384 aa5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 GRIK1P39086 918 aa5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 IDH3AP50213 366 aa5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 UVSSAQ2YD98 709 aa5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 STOML1Q9UBI4 398 aa5.65□□□□□ -1.5
RNU6-238P-201ENST00000363313 DHX15O43143 795 aaKnown RBP5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 TARSP26639 723 aaKnown RBP5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 GP2P55259 537 aaKnown RBP5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 PLAURQ03405 335 aa5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 MYO19Q96H55 970 aa5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 NGLY1Q96IV0 654 aa5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 CEP41Q9BYV8 373 aa5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 RBSNQ9H1K0 784 aa5.64□□□□□ -1.51
RNU6-238P-201ENST00000363313 LOC102724428A0A0B4J2F2 783 aa5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 MICAL2O94851 1124 aa5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 SIK1P57059 783 aa5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 C11orf91Q3C1V1 193 aa5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 HDGFL1Q5TGJ6 251 aa5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 CHMP7Q8WUX9 453 aaPredicted RBP5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 ZNF594Q96JF6 807 aaPredicted RBP5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 UCN2Q96RP3 112 aa5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 RNF114Q9Y508 228 aa5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 OAS3Q9Y6K5 1087 aaKnown RBP5.63□□□□□ -1.51
RNU6-238P-201ENST00000363313 FOXO3O43524 673 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 SASH3O75995 380 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 GHRHP01286 108 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 PSAPP07602 524 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 EIF2AK2P19525 551 aaKnown RBP5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 RASA1P20936 1047 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 FZD5Q13467 585 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 SETDB1Q15047 1291 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 LARP1Q6PKG0 1096 aaKnown RBP5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 IL22RA1Q8N6P7 574 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 ADAMTS19Q8TE59 1207 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 PLD4Q96BZ4 506 aa5.62□□□□□ -1.51
RNU6-238P-201ENST00000363313 ALX3O95076 343 aa5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 MED26O95402 600 aa5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 SPINK2P20155 84 aa5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 LCE1DQ5T752 114 aa5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 DTX1Q86Y01 620 aa5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 ARID1BQ8NFD5 2236 aaPredicted RBP5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 HINFPQ9BQA5 517 aa5.61□□□□□ -1.51
RNU6-238P-201ENST00000363313 GLB1P16278 677 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 NFIAQ12857 509 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 FLIIQ13045 1269 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 RNF43Q68DV7 783 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 KRT25Q7Z3Z0 450 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 ZDHHC13Q8IUH4 622 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 RTCBQ9Y3I0 505 aaKnown RBP5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 PPME1Q9Y570 386 aa5.6□□□□□ -1.51
RNU6-238P-201ENST00000363313 OPLAHO14841 1288 aa5.59□□□□□ -1.51
RNU6-238P-201ENST00000363313 WNT11O96014 354 aa5.59□□□□□ -1.51
RNU6-238P-201ENST00000363313 MLLT1Q03111 559 aaPredicted RBP5.59□□□□□ -1.51
RNU6-238P-201ENST00000363313 DGKZQ13574 1117 aa5.59□□□□□ -1.51
RNU6-238P-201ENST00000363313 UBL7Q96S82 380 aaPredicted RBP5.59□□□□□ -1.51
RNU6-238P-201ENST00000363313 DBNDD2Q9BQY9 259 aa5.59□□□□□ -1.51
RNU6-238P-201ENST00000363313 KLK14Q9P0G3 267 aa5.59□□□□□ -1.51
RNU6-238P-201ENST00000363313 XYLBO75191 536 aa5.58□□□□□ -1.52
RNU6-238P-201ENST00000363313 TGFB1P01137 390 aa5.58□□□□□ -1.52
RNU6-238P-201ENST00000363313 WEE1P30291 646 aa5.58□□□□□ -1.52
RNU6-238P-201ENST00000363313 HFE2Q6ZVN8 426 aa5.58□□□□□ -1.52
RNU6-238P-201ENST00000363313 FAM46AQ96IP4 442 aaKnown RBP5.58□□□□□ -1.52
RNU6-238P-201ENST00000363313 FAM196BA6NMK8 535 aa5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 POM121CA8CG34 1229 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms