RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 TSPY2A6NKD2 308 aa12.12□□□□□ -0.47
HIPK1-202ENST00000361587 FAM200AQ8TCP9 573 aa12.12□□□□□ -0.47
HIPK1-202ENST00000361587 HDAC1Q13547 482 aaPredicted RBP12.11□□□□□ -0.47
HIPK1-202ENST00000361587 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 SLC26A6Q9BXS9 759 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
HIPK1-202ENST00000361587 PIP4K2BP78356 416 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 ANKRD24Q8TF21 1146 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 CRNKL1Q9BZJ0 848 aaKnown RBP12.11□□□□□ -0.47
HIPK1-202ENST00000361587 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
HIPK1-202ENST00000361587 TACC1O75410 805 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 TUBBP07437 444 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 GNAQP50148 359 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 NCOA1Q15788 1441 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 CFAP57Q96MR6 1250 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 IQCGQ9H095 443 aaKnown RBP12.11□□□□□ -0.47
HIPK1-202ENST00000361587 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 F6X3S4 739 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 KIF4AO95239 1232 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 KRT83P78385 493 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 MRPS27Q92552 414 aaKnown RBP12.11□□□□□ -0.47
HIPK1-202ENST00000361587 SSX2IPQ9Y2D8 614 aa12.11□□□□□ -0.47
HIPK1-202ENST00000361587 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 C20orf194Q5TEA3 1177 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 SCAF11Q99590 1463 aaKnown RBP12.1□□□□□ -0.47
HIPK1-202ENST00000361587 ANKRD36BQ8N2N9 1353 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 RRAGBQ5VZM2 374 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 SPAG5Q96R06 1193 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.1□□□□□ -0.47
HIPK1-202ENST00000361587 MAP3K2Q9Y2U5 619 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 V9GYY5 206 aaPredicted RBP12.1□□□□□ -0.47
HIPK1-202ENST00000361587 MICU3Q86XE3 530 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 RBM27Q9P2N5 1060 aaKnown RBP12.1□□□□□ -0.47
HIPK1-202ENST00000361587 RALGAPBQ86X10 1494 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 MYO1BO43795 1136 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 KRT13P13646 458 aa12.1□□□□□ -0.47
HIPK1-202ENST00000361587 PSMA7O14818 248 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 ATP2A1O14983 1001 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 WTAPQ15007 396 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 STAT6P42226 847 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 NUCB1Q02818 461 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 MNAT1P51948 309 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 TMX3Q96JJ7 454 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 ZGPATQ8N5A5 531 aaKnown RBP12.09□□□□□ -0.47
HIPK1-202ENST00000361587 GOLGA1Q92805 767 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 NESP48681 1621 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 SKILP12757 684 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 DRC1Q96MC2 740 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 GDPD2Q9HCC8 539 aa12.09□□□□□ -0.47
HIPK1-202ENST00000361587 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
HIPK1-202ENST00000361587 NOLC1Q14978 699 aaKnown RBP eCLIP12.08□□□□□ -0.48
HIPK1-202ENST00000361587 CCDC6Q16204 474 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 HS1BP3Q53T59 392 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 LDHAL6AQ6ZMR3 332 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 FMNL3Q8IVF7 1028 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 CTAGE9A4FU28 777 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 ZBTB43O43298 467 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 CLCN1P35523 988 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
HIPK1-202ENST00000361587 MSL1Q68DK7 614 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 SNX21Q969T3 373 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 NME9Q86XW9 330 aa12.08□□□□□ -0.48
HIPK1-202ENST00000361587 PUF60Q9UHX1 559 aaKnown RBP12.08□□□□□ -0.48
HIPK1-202ENST00000361587 WASLO00401 505 aaPredicted RBP12.07□□□□□ -0.48
HIPK1-202ENST00000361587 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 IFNL2Q8IZJ0 200 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 ESR2Q92731 530 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 PHF8Q9UPP1 1060 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 KLF18A0A0U1RQI7 1052 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 KRT86O43790 486 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 SLU7O95391 586 aaKnown RBP12.07□□□□□ -0.48
HIPK1-202ENST00000361587 BICD1Q96G01 975 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 DDX23Q9BUQ8 820 aaKnown RBP12.07□□□□□ -0.48
HIPK1-202ENST00000361587 LIG1P18858 919 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 ALG1Q9BT22 464 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 BICDL2A1A5D9 508 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
HIPK1-202ENST00000361587 ARFGAP2Q8N6H7 521 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 CALM1P0DP23 149 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 CALM2P0DP24 149 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 CALM3P0DP25 149 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 RTN1Q16799 776 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 MPRIPQ6WCQ1 1025 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 DAAM2Q86T65 1068 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 SMC6Q96SB8 1091 aa12.07□□□□□ -0.48
HIPK1-202ENST00000361587 KIF14Q15058 1648 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 GIMAP6Q6P9H5 292 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 SAMM50Q9Y512 469 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 RHPN1Q8TCX5 695 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 SYNCQ9H7C4 482 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 RTL9Q8NET4 1388 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 DNAI1Q9UI46 699 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 PTPN23Q9H3S7 1636 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 GPATCH11Q8N954 259 aa12.06□□□□□ -0.48
HIPK1-202ENST00000361587 UTP14AQ9BVJ6 771 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms