RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 SETDB2Q96T68 719 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 RTN4Q9NQC3 1192 aaKnown RBP13.94□□□□□ -0.18
HPS1-204ENST00000361490 RTCBQ9Y3I0 505 aaKnown RBP13.94□□□□□ -0.18
HPS1-204ENST00000361490 PALLDQ8WX93 1383 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 A0A0D9SFI3 127 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 H7C1W4 665 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 CHST3Q7LGC8 479 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 CYP46A1Q9Y6A2 500 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 RGPD5Q99666 1765 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 USPL1Q5W0Q7 1092 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 RAB11FIP4Q86YS3 637 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 COPRSQ9NQ92 184 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 ZNF219Q9P2Y4 722 aaPredicted RBP13.94□□□□□ -0.18
HPS1-204ENST00000361490 AKAP2Q9Y2D5 859 aa13.94□□□□□ -0.18
HPS1-204ENST00000361490 KIF1AQ12756 1690 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 SLC4A8Q2Y0W8 1093 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 SUSD4Q5VX71 490 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 CCDC83Q8IWF9 413 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 NECAB1Q8N987 351 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 XAGE2Q96GT9 111 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 CHAMP1Q96JM3 812 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 ANTXR1Q9H6X2 564 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 PAG1Q9NWQ8 432 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 DDX49Q9Y6V7 483 aaKnown RBP13.93□□□□□ -0.18
HPS1-204ENST00000361490 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.93□□□□□ -0.18
HPS1-204ENST00000361490 HIP1O00291 1037 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 SGSM2O43147 1006 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 RRP12Q5JTH9 1297 aaKnown RBP13.93□□□□□ -0.18
HPS1-204ENST00000361490 OSBPL3Q9H4L5 887 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 PDRG1Q9NUG6 133 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 STRCP1A6NGW2 1772 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 LRP2BPQ9P2M1 347 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 STAP2Q9UGK3 403 aa13.93□□□□□ -0.18
HPS1-204ENST00000361490 BLOC1S2Q6QNY1 142 aa13.92□□□□□ -0.18
HPS1-204ENST00000361490 TMX3Q96JJ7 454 aa13.92□□□□□ -0.18
HPS1-204ENST00000361490 ERBB4Q15303 1308 aa13.92□□□□□ -0.18
HPS1-204ENST00000361490 IL6STP40189 918 aaPredicted RBP13.92□□□□□ -0.18
HPS1-204ENST00000361490 SPATA31A5Q5VU36 1347 aa13.92□□□□□ -0.18
HPS1-204ENST00000361490 SPATA31A7Q8IWB4 1347 aa13.92□□□□□ -0.18
HPS1-204ENST00000361490 FOXO4P98177 505 aa13.92□□□□□ -0.18
HPS1-204ENST00000361490 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
HPS1-204ENST00000361490 CTSWP56202 376 aa13.91□□□□□ -0.18
HPS1-204ENST00000361490 TNPO1Q92973 898 aaKnown RBP13.91□□□□□ -0.18
HPS1-204ENST00000361490 PDE8AO60658 829 aa13.91□□□□□ -0.18
HPS1-204ENST00000361490 PCCAP05165 728 aaPredicted RBP13.91□□□□□ -0.18
HPS1-204ENST00000361490 MTX1Q13505 466 aa13.91□□□□□ -0.18
HPS1-204ENST00000361490 GSE1Q14687 1217 aa13.91□□□□□ -0.18
HPS1-204ENST00000361490 CCDC152Q4G0S7 254 aa13.91□□□□□ -0.18
HPS1-204ENST00000361490 DDX11Q96FC9 970 aa13.91□□□□□ -0.18
HPS1-204ENST00000361490 RAI14Q9P0K7 980 aa13.91□□□□□ -0.18
HPS1-204ENST00000361490 ZAP70P43403 619 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 FERMT3Q86UX7 667 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 GDPD2Q9HCC8 539 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 MCM4P33991 863 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 SLC9C2Q5TAH2 1124 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 FAM196AQ6ZSG2 479 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 VSIG10Q8N0Z9 540 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 TTLL11Q8NHH1 800 aa13.9□□□□□ -0.18
HPS1-204ENST00000361490 G3V3G9 751 aa13.89□□□□□ -0.19
HPS1-204ENST00000361490 PRPF40AO75400 957 aaKnown RBP13.89□□□□□ -0.19
HPS1-204ENST00000361490 DCAF8Q5TAQ9 597 aa13.89□□□□□ -0.19
HPS1-204ENST00000361490 ZNF589Q86UQ0 364 aaPredicted RBP13.89□□□□□ -0.19
HPS1-204ENST00000361490 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
HPS1-204ENST00000361490 MTMR7Q9Y216 660 aa13.89□□□□□ -0.19
HPS1-204ENST00000361490 THRAP3Q9Y2W1 955 aaKnown RBP13.89□□□□□ -0.19
HPS1-204ENST00000361490 PKP1Q13835 747 aa13.89□□□□□ -0.19
HPS1-204ENST00000361490 TRAK2O60296 914 aa13.89□□□□□ -0.19
HPS1-204ENST00000361490 GJD4Q96KN9 370 aaPredicted RBP13.89□□□□□ -0.19
HPS1-204ENST00000361490 RGPD1P0DJD0 1748 aa13.89□□□□□ -0.19
HPS1-204ENST00000361490 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 ADCK5Q3MIX3 580 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 KIF2CQ99661 725 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
HPS1-204ENST00000361490 TFCP2L1Q9NZI6 479 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 LRRFIP1Q32MZ4 808 aaKnown RBP13.88□□□□□ -0.19
HPS1-204ENST00000361490 TRAPPC3LQ5T215 181 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
HPS1-204ENST00000361490 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 SNX14Q9Y5W7 946 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 JCADQ9P266 1359 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 AK2P54819 239 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 CREB3L3Q68CJ9 461 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
HPS1-204ENST00000361490 SLC5A1P13866 664 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 PSMA5P28066 241 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 ERFEQ4G0M1 354 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 MIGA1Q8NAN2 632 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 TRPC5Q9UL62 973 aaPredicted RBP13.87□□□□□ -0.19
HPS1-204ENST00000361490 CCDC171Q6TFL3 1326 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 CCT2P78371 535 aaKnown RBP13.87□□□□□ -0.19
HPS1-204ENST00000361490 MCMDC2Q4G0Z9 681 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 AIDAQ96BJ3 306 aa13.87□□□□□ -0.19
HPS1-204ENST00000361490 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■□□ 16.4
HPS1-204ENST00000361490 PPP1R1BQ9UD71 204 aaPredicted RBP13.87□□□□□ -0.19
HPS1-204ENST00000361490 TRDNQ13061 729 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms