RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 SPTLC3Q9NUV7 552 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 PA2G4Q9UQ80 394 aaKnown RBP10.8□□□□□ -0.68
TOP1-201ENST00000361337 MAP3K5Q99683 1374 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 F13A1P00488 732 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 GNAI3P08754 354 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 FAM184AQ8NB25 1140 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 KLHDC4Q8TBB5 520 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 ASAP1Q9ULH1 1129 aa10.8□□□□□ -0.68
TOP1-201ENST00000361337 SPATA31A3Q5VYP0 1347 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 UBE2HP62256 183 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 HMGN5P82970 282 aaKnown RBP10.79□□□□□ -0.68
TOP1-201ENST00000361337 ST3GAL1Q11201 340 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 UVSSAQ2YD98 709 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 PRIMPOLQ96LW4 560 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 LSG1Q9H089 658 aaKnown RBP10.79□□□□□ -0.68
TOP1-201ENST00000361337 STRCQ7RTU9 1775 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
TOP1-201ENST00000361337 SGSM2O43147 1006 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 TNNT1P13805 278 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 GTF2F1P35269 517 aaKnown RBP eCLIP10.79□□□□□ -0.68
TOP1-201ENST00000361337 KIF6Q6ZMV9 814 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 KIF3AQ9Y496 699 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 PKD1L3Q7Z443 1732 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 GOLGA6L4A6NEF3 574 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 ATP6V1AP38606 617 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 CAMK4Q16566 473 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 DNAJC10Q8IXB1 793 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 KIAA1524Q8TCG1 905 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 IL17RAQ96F46 866 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 USP21Q9UK80 565 aa10.79□□□□□ -0.68
TOP1-201ENST00000361337 RAD50Q92878 1312 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 SNRPA1P09661 255 aaKnown RBP10.78□□□□□ -0.68
TOP1-201ENST00000361337 CASTP20810 708 aaKnown RBP10.78□□□□□ -0.68
TOP1-201ENST00000361337 DMTNQ08495 405 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 PPP1R42Q7Z4L9 355 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 NECAB1Q8N987 351 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 CCDC8Q9H0W5 538 aaPredicted RBP10.78□□□□□ -0.68
TOP1-201ENST00000361337 SOS1Q07889 1333 aaPredicted RBP10.78□□□□□ -0.68
TOP1-201ENST00000361337 PTH1RQ03431 593 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 STK11IPQ8N1F8 1099 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 DNAJC2Q99543 621 aaKnown RBP10.78□□□□□ -0.68
TOP1-201ENST00000361337 TMX1Q9H3N1 280 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 STARD3NLO95772 234 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 U2AF2P26368 475 aaKnown RBP eCLIP10.78□□□□□ -0.682e-10■■□□□ 13.2
TOP1-201ENST00000361337 GJB2P29033 226 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 FERMT3Q86UX7 667 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 CCAR2Q8N163 923 aaKnown RBP10.78□□□□□ -0.68
TOP1-201ENST00000361337 FBXW7Q969H0 707 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 ZNF219Q9P2Y4 722 aaPredicted RBP10.78□□□□□ -0.68
TOP1-201ENST00000361337 SMC3Q9UQE7 1217 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 MTMR6Q9Y217 621 aa10.78□□□□□ -0.68
TOP1-201ENST00000361337 KIF1AQ12756 1690 aa10.77□□□□□ -0.68
TOP1-201ENST00000361337 CYP27B1O15528 508 aa10.77□□□□□ -0.69
TOP1-201ENST00000361337 IGSF1Q8N6C5 1336 aa10.77□□□□□ -0.69
TOP1-201ENST00000361337 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
TOP1-201ENST00000361337 PTGS1P23219 599 aa10.77□□□□□ -0.69
TOP1-201ENST00000361337 LRMPQ12912 555 aa10.77□□□□□ -0.69
TOP1-201ENST00000361337 HYPKQ9NX55 129 aa10.77□□□□□ -0.69
TOP1-201ENST00000361337 LIMCH1Q9UPQ0 1083 aa10.77□□□□□ -0.69
TOP1-201ENST00000361337 PLCH1Q4KWH8 1693 aa10.77□□□□□ -0.69
TOP1-201ENST00000361337 VPS37CA5D8V6 355 aaPredicted RBP10.76□□□□□ -0.69
TOP1-201ENST00000361337 PHKG2P15735 406 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 NAA30Q147X3 362 aaPredicted RBP10.76□□□□□ -0.69
TOP1-201ENST00000361337 LUZP1Q86V48 1076 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 C1orf167Q5SNV9 1468 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 RHPN1Q8TCX5 695 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 NRBP1Q9UHY1 535 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 CACNA1FO60840 1977 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 UBR2Q8IWV8 1755 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 LIG1P18858 919 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 CHMP4CQ96CF2 233 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 TCEANC2Q96MN5 208 aa10.76□□□□□ -0.69
TOP1-201ENST00000361337 DHX37Q8IY37 1157 aaKnown RBP10.75□□□□□ -0.69
TOP1-201ENST00000361337 CKAP2LQ8IYA6 745 aa10.75□□□□□ -0.69
TOP1-201ENST00000361337 CLASRPQ8N2M8 674 aaKnown RBP10.75□□□□□ -0.69
TOP1-201ENST00000361337 GPATCH11Q8N954 259 aa10.75□□□□□ -0.69
TOP1-201ENST00000361337 EIF4A1P60842 406 aaKnown RBP10.75□□□□□ -0.69
TOP1-201ENST00000361337 PRPF40BQ6NWY9 871 aaKnown RBP10.75□□□□□ -0.69
TOP1-201ENST00000361337 SSH3Q8TE77 659 aa10.75□□□□□ -0.69
TOP1-201ENST00000361337 JAKMIP1Q96N16 626 aaKnown RBP10.75□□□□□ -0.69
TOP1-201ENST00000361337 SLC52A2Q9HAB3 445 aa10.75□□□□□ -0.69
TOP1-201ENST00000361337 CCDC66A2RUB6 948 aa10.75□□□□□ -0.69
TOP1-201ENST00000361337 ME3Q16798 604 aa10.75□□□□□ -0.69
TOP1-201ENST00000361337 TTC6Q86TZ1 520 aa10.75□□□□□ -0.69
TOP1-201ENST00000361337 TRMT112Q9UI30 125 aaKnown RBP10.75□□□□□ -0.69
TOP1-201ENST00000361337 FAM89AQ96GI7 184 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 TRIM34Q9BYJ4 488 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 TOMM22Q9NS69 142 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 OVOS2A0A0J9YW53 1432 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 OVOS2Q6IE36 1432 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 CNNM1Q9NRU3 951 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.74□□□□□ -0.69
TOP1-201ENST00000361337 TAF6LQ9Y6J9 622 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 V9GYY5 206 aaPredicted RBP10.74□□□□□ -0.69
TOP1-201ENST00000361337 TTLL7Q6ZT98 887 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 CDC37L1Q7L3B6 337 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 AACSQ86V21 672 aa10.74□□□□□ -0.69
TOP1-201ENST00000361337 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms