RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 TRIM22Q8IYM9 498 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 CPSF1Q10570 1443 aaKnown RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 MAP3K15Q6ZN16 1313 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 EYA2O00167 538 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 MYCNP04198 464 aaPredicted RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 HIBADHP31937 336 aaKnown RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 EAPPQ56P03 285 aaPredicted RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 CRNKL1Q9BZJ0 848 aaKnown RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 ATG3Q9NT62 314 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 SPATA31D1Q6ZQQ2 1576 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 NEXMIFQ5QGS0 1516 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 LDHBP07195 334 aaKnown RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 TRIM44Q96DX7 344 aaPredicted RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 ZNF213O14771 459 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 DPY19L2Q6NUT2 758 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 GIGYF2Q6Y7W6 1299 aaKnown RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 IQCA1Q86XH1 822 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 CCDC82Q8N4S0 544 aa8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 MARCH10Q8NA82 808 aaPredicted RBP8.38□□□□□ -1.07
LRRTM3-201ENST00000361320 L1TD1Q5T7N2 865 aaKnown RBP8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 MIGA1Q8NAN2 632 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 EVI5LQ96CN4 794 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 SUCLG2Q96I99 432 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 NEURL1BA8MQ27 555 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 STX8Q9UNK0 236 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 ERBB4Q15303 1308 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 TSPY2A6NKD2 308 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 RPS6KA4O75676 772 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 PLEKHF1Q96S99 279 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
LRRTM3-201ENST00000361320 A0A1B0GUL7 405 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 SUPT20HQ8NEM7 779 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 UPF3BQ9BZI7 483 aaKnown RBP8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 PES1O00541 588 aaKnown RBP8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 CHMP4BP1P59074 171 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 PRKG1Q13976 671 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 SPATA31A5Q5VU36 1347 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 SPATA31A7Q8IWB4 1347 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 ZC3H13Q5T200 1668 aaKnown RBP8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 HEG1Q9ULI3 1381 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 KRT32Q14532 448 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 CEP85Q6P2H3 762 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 OVOS2A0A0G2JMS6 1433 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 OVOS2A0A0J9YW53 1432 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 OVOS2Q6IE36 1432 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 DRC7Q8IY82 874 aa8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 RNF41Q9H4P4 317 aaPredicted RBP8.36□□□□□ -1.07
LRRTM3-201ENST00000361320 USP31Q70CQ4 1352 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 GOLGA6L6A8MZA4 724 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 PDE4BQ07343 736 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 ZBTB38Q8NAP3 1195 aaPredicted RBP8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 SYAP1Q96A49 352 aaPredicted RBP8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 SLC4A4Q9Y6R1 1079 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 NRDCO43847 1150 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 CTSWP56202 376 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 DOK7Q18PE1 504 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 BICD2Q8TD16 824 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 SPON1Q9HCB6 807 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 IFIT3O14879 490 aaKnown RBP8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 IGHDP01880 384 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 GTF2IP78347 998 aa8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 IPO9Q96P70 1041 aaKnown RBP8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 ANO8Q9HCE9 1232 aaPredicted RBP8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.35□□□□□ -1.07
LRRTM3-201ENST00000361320 H7C1D1 291 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 CASTP20810 708 aaKnown RBP8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 MAGEB6Q8N7X4 407 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 SLC27A3Q5K4L6 730 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 CTCFLQ8NI51 663 aaPredicted RBP8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 DBNDD2Q9BQY9 259 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 PAG1Q9NWQ8 432 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 MCM9Q9NXL9 1143 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 RICTORQ6R327 1708 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 MST1RQ04912 1400 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 CDK12Q9NYV4 1490 aaPredicted RBP8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 RABEP1Q15276 862 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 ERFEQ4G0M1 354 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 VSIG10Q8N0Z9 540 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 VAT1LQ9HCJ6 419 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 PDRG1Q9NUG6 133 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 DENND2AQ9ULE3 1009 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 PNPLA6Q8IY17 1366 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 SSH2Q76I76 1423 aa8.34□□□□□ -1.07
LRRTM3-201ENST00000361320 PCCAP05165 728 aaPredicted RBP8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 TNNI2P48788 182 aa8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 ANKRD1Q15327 319 aa8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 NCOA3Q9Y6Q9 1424 aa8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 DIP2AQ14689 1571 aa8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 ZFYP08048 801 aaPredicted RBP8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 ZNF76P36508 570 aa8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 PDE1AP54750 535 aa8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 TPD52L1Q16890 204 aaPredicted RBP8.33□□□□□ -1.08
LRRTM3-201ENST00000361320 MFSD6Q6ZSS7 791 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms