RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 GMNNO75496 209 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 MAATS1Q7Z4T9 603 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 USP16Q9Y5T5 823 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 METAP2P50579 478 aaKnown RBP eCLIP11.03□□□□□ -0.643e-6■■■■□ 24.7
CUX1-203ENST00000360264 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 DAAM2Q86T65 1068 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 SMARCC1Q92922 1105 aaPredicted RBP11.03□□□□□ -0.64
CUX1-203ENST00000360264 ORC3Q9UBD5 711 aaPredicted RBP11.03□□□□□ -0.64
CUX1-203ENST00000360264 SNRPA1P09661 255 aaKnown RBP11.03□□□□□ -0.64
CUX1-203ENST00000360264 UBE2HP62256 183 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
CUX1-203ENST00000360264 CALM1P0DP23 149 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 CALM2P0DP24 149 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 CALM3P0DP25 149 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 OTUD6BQ8N6M0 293 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 RUSC2Q8N2Y8 1516 aa11.03□□□□□ -0.64
CUX1-203ENST00000360264 UQCRFS1P1P0C7P4 283 aa11.02□□□□□ -0.64
CUX1-203ENST00000360264 CERS3Q8IU89 383 aa11.02□□□□□ -0.64
CUX1-203ENST00000360264 SMC6Q96SB8 1091 aa11.02□□□□□ -0.64
CUX1-203ENST00000360264 N4BP3O15049 544 aa11.02□□□□□ -0.64
CUX1-203ENST00000360264 XPCQ01831 940 aaPredicted RBP11.02□□□□□ -0.64
CUX1-203ENST00000360264 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.65
CUX1-203ENST00000360264 NCOA1Q15788 1441 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 TACC1O75410 805 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 IDEP14735 1019 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 SLFN5Q08AF3 891 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
CUX1-203ENST00000360264 ERICH4A6NGS2 130 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 SYKP43405 635 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 CEP135Q66GS9 1140 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 RP1L1Q8IWN7 2480 aaPredicted RBP11.02□□□□□ -0.65
CUX1-203ENST00000360264 HSPA4P34932 840 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 SNX16P57768 344 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 SWAP70Q9UH65 585 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 WTAPQ15007 396 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 MAP7D1Q3KQU3 841 aa11.02□□□□□ -0.65
CUX1-203ENST00000360264 BMP2KLQ5H9B9 411 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 MCM10Q7L590 875 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 NUMA1Q14980 2115 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 RTL9Q8NET4 1388 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 CNGA1P29973 690 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 TOP2BQ02880 1626 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 BRPF3Q9ULD4 1205 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 OPA1O60313 960 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 SLC26A6Q9BXS9 759 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 IVLP07476 585 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 RBM25P49756 843 aaKnown RBP11.01□□□□□ -0.65
CUX1-203ENST00000360264 RNF187Q5TA31 235 aaPredicted RBP11.01□□□□□ -0.65
CUX1-203ENST00000360264 TUBBP07437 444 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 RBM10P98175 930 aaKnown RBP11.01□□□□□ -0.65
CUX1-203ENST00000360264 PSMD1Q99460 953 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 ZC3H6P61129 1189 aaKnown RBP11.01□□□□□ -0.65
CUX1-203ENST00000360264 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
CUX1-203ENST00000360264 TNNT1P13805 278 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 RPL13P26373 211 aaKnown RBP11.01□□□□□ -0.65
CUX1-203ENST00000360264 GABPB2Q8TAK5 448 aaPredicted RBP11.01□□□□□ -0.65
CUX1-203ENST00000360264 TRIM47Q96LD4 638 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 PTPN23Q9H3S7 1636 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
CUX1-203ENST00000360264 PHF8Q9UPP1 1060 aa11□□□□□ -0.65
CUX1-203ENST00000360264 MAP3K2Q9Y2U5 619 aa11□□□□□ -0.65
CUX1-203ENST00000360264 NOL3O60936 208 aaKnown RBP11□□□□□ -0.65
CUX1-203ENST00000360264 ZNF710Q8N1W2 664 aa11□□□□□ -0.65
CUX1-203ENST00000360264 STAT6P42226 847 aa11□□□□□ -0.65
CUX1-203ENST00000360264 ZNF354CQ86Y25 554 aa11□□□□□ -0.65
CUX1-203ENST00000360264 NYXQ9GZU5 481 aa11□□□□□ -0.65
CUX1-203ENST00000360264 CCDC171Q6TFL3 1326 aa11□□□□□ -0.65
CUX1-203ENST00000360264 PRIMPOLQ96LW4 560 aa11□□□□□ -0.65
CUX1-203ENST00000360264 HAUS2Q9NVX0 235 aa11□□□□□ -0.65
CUX1-203ENST00000360264 GNA11P29992 359 aa11□□□□□ -0.65
CUX1-203ENST00000360264 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
CUX1-203ENST00000360264 VTI1AQ96AJ9 217 aa11□□□□□ -0.65
CUX1-203ENST00000360264 WASLO00401 505 aaPredicted RBP11□□□□□ -0.65
CUX1-203ENST00000360264 CCDC110Q8TBZ0 833 aa11□□□□□ -0.65
CUX1-203ENST00000360264 LIG1P18858 919 aa11□□□□□ -0.65
CUX1-203ENST00000360264 SMARCC2Q8TAQ2 1214 aa11□□□□□ -0.65
CUX1-203ENST00000360264 KCNG4Q8TDN1 519 aa11□□□□□ -0.65
CUX1-203ENST00000360264 VAT1LQ9HCJ6 419 aa11□□□□□ -0.65
CUX1-203ENST00000360264 PHACTR2O75167 634 aa11□□□□□ -0.65
CUX1-203ENST00000360264 ATP5DP30049 168 aa11□□□□□ -0.65
CUX1-203ENST00000360264 ERCC6LQ2NKX8 1250 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 MAK16Q9BXY0 300 aaKnown RBP10.99□□□□□ -0.65
CUX1-203ENST00000360264 SNAPC4Q5SXM2 1469 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 MAGI1Q96QZ7 1491 aaPredicted RBP10.99□□□□□ -0.65
CUX1-203ENST00000360264 TCERG1LQ5VWI1 586 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 FLIIQ13045 1269 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 HS2ST1Q7LGA3 356 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 NAA16Q6N069 864 aaPredicted RBP10.99□□□□□ -0.65
CUX1-203ENST00000360264 NAP1L3Q99457 506 aaPredicted RBP10.99□□□□□ -0.65
CUX1-203ENST00000360264 RRP36Q96EU6 259 aaKnown RBP10.99□□□□□ -0.65
CUX1-203ENST00000360264 CSRNP2Q9H175 543 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 MKRN1Q9UHC7 482 aaKnown RBP10.99□□□□□ -0.65
CUX1-203ENST00000360264 TIGD1Q96MW7 591 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 POLD1P28340 1107 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 ZNF165P49910 485 aa10.99□□□□□ -0.65
CUX1-203ENST00000360264 FERMT3Q86UX7 667 aa10.98□□□□□ -0.65
CUX1-203ENST00000360264 IL16Q14005 1332 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms