RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 BRIP1Q9BX63 1249 aa15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 RIC1Q4ADV7 1423 aa15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 KLRG2A4D1S0 409 aaPredicted RBP15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 ANKRD44Q8N8A2 993 aa15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 NLRP3Q96P20 1036 aa15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 BICC1Q9H694 974 aaKnown RBP15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 C1orf115Q9H7X2 142 aa15.54■□□□□ 0.08
NIF3L1-201ENST00000359683 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
NIF3L1-201ENST00000359683 SF3B3Q15393 1217 aaKnown RBP15.53■□□□□ 0.08
NIF3L1-201ENST00000359683 ERICH6BQ5W0A0 696 aa15.53■□□□□ 0.08
NIF3L1-201ENST00000359683 TTLL11Q8NHH1 800 aa15.53■□□□□ 0.08
NIF3L1-201ENST00000359683 DDX60Q8IY21 1712 aaKnown RBP15.52■□□□□ 0.08
NIF3L1-201ENST00000359683 CTSWP56202 376 aa15.52■□□□□ 0.08
NIF3L1-201ENST00000359683 MTX1Q13505 466 aa15.52■□□□□ 0.08
NIF3L1-201ENST00000359683 LMBR1LQ6UX01 489 aa15.52■□□□□ 0.08
NIF3L1-201ENST00000359683 C3orf67Q6ZVT6 689 aa15.52■□□□□ 0.08
NIF3L1-201ENST00000359683 RPAP2Q8IXW5 612 aaPredicted RBP15.52■□□□□ 0.08
NIF3L1-201ENST00000359683 PCDHB15Q9Y5E8 787 aa15.52■□□□□ 0.08
NIF3L1-201ENST00000359683 YBX3P16989 372 aaKnown RBP eCLIP15.51■□□□□ 0.074e-6■□□□□ 11.2
NIF3L1-201ENST00000359683 ATP8B2P98198 1209 aa15.51■□□□□ 0.07
NIF3L1-201ENST00000359683 CEP85Q6P2H3 762 aa15.51■□□□□ 0.07
NIF3L1-201ENST00000359683 LAMB2P55268 1798 aa15.51■□□□□ 0.07
NIF3L1-201ENST00000359683 PDE6BP35913 854 aa15.5■□□□□ 0.07
NIF3L1-201ENST00000359683 CRY2Q49AN0 593 aa15.5■□□□□ 0.07
NIF3L1-201ENST00000359683 RTN4Q9NQC3 1192 aaKnown RBP15.5■□□□□ 0.07
NIF3L1-201ENST00000359683 C10orf71Q711Q0 1435 aa15.5■□□□□ 0.07
NIF3L1-201ENST00000359683 CCDC152Q4G0S7 254 aa15.5■□□□□ 0.07
NIF3L1-201ENST00000359683 SIRT2Q8IXJ6 389 aa15.5■□□□□ 0.07
NIF3L1-201ENST00000359683 ANKRD31Q8N7Z5 1873 aa15.49■□□□□ 0.07
NIF3L1-201ENST00000359683 MYH3P11055 1940 aa15.49■□□□□ 0.07
NIF3L1-201ENST00000359683 RTL9Q8NET4 1388 aa15.49■□□□□ 0.07
NIF3L1-201ENST00000359683 PDZRN3Q9UPQ7 1066 aa15.49■□□□□ 0.07
NIF3L1-201ENST00000359683 CD2APQ9Y5K6 639 aa15.49■□□□□ 0.07
NIF3L1-201ENST00000359683 TNRC6CQ9HCJ0 1690 aaKnown RBP15.48■□□□□ 0.07
NIF3L1-201ENST00000359683 PNMA6EA0A0J9YXQ4 647 aa15.48■□□□□ 0.07
NIF3L1-201ENST00000359683 GRIN3BO60391 1043 aa15.48■□□□□ 0.07
NIF3L1-201ENST00000359683 POLA2Q14181 598 aa15.48■□□□□ 0.07
NIF3L1-201ENST00000359683 SSH3Q8TE77 659 aa15.48■□□□□ 0.07
NIF3L1-201ENST00000359683 GREM2Q9H772 168 aa15.48■□□□□ 0.07
NIF3L1-201ENST00000359683 SRGNP10124 158 aa15.47■□□□□ 0.07
NIF3L1-201ENST00000359683 HOXA10P31260 410 aaPredicted RBP15.47■□□□□ 0.07
NIF3L1-201ENST00000359683 RFX5P48382 616 aaPredicted RBP15.47■□□□□ 0.07
NIF3L1-201ENST00000359683 FAM161AQ3B820 660 aa15.47■□□□□ 0.07
NIF3L1-201ENST00000359683 CCDC85AQ96PX6 553 aaPredicted RBP15.47■□□□□ 0.07
NIF3L1-201ENST00000359683 GOLGB1Q14789 3259 aaKnown RBP15.47■□□□□ 0.07
NIF3L1-201ENST00000359683 KIF13BQ9NQT8 1826 aa15.47■□□□□ 0.07
NIF3L1-201ENST00000359683 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
NIF3L1-201ENST00000359683 CHMP3Q9Y3E7 222 aa15.46■□□□□ 0.07
NIF3L1-201ENST00000359683 KIAA1551Q9HCM1 1747 aa15.46■□□□□ 0.07
NIF3L1-201ENST00000359683 H0YIN7 160 aa15.46■□□□□ 0.06
NIF3L1-201ENST00000359683 ITGA6P23229 1130 aa15.46■□□□□ 0.06
NIF3L1-201ENST00000359683 TGFB2P61812 414 aa15.46■□□□□ 0.06
NIF3L1-201ENST00000359683 IFIT5Q13325 482 aaKnown RBP15.46■□□□□ 0.06
NIF3L1-201ENST00000359683 CCDC57Q2TAC2 916 aa15.46■□□□□ 0.06
NIF3L1-201ENST00000359683 C2CD5Q86YS7 1000 aa15.46■□□□□ 0.06
NIF3L1-201ENST00000359683 SEC31BQ9NQW1 1179 aa15.46■□□□□ 0.06
NIF3L1-201ENST00000359683 ANKRD18BA2A2Z9 1011 aa15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 ZBTB22O15209 634 aa15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 HMMRO75330 724 aa15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 NPR1P16066 1061 aa15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 DDX46Q7L014 1031 aaKnown RBP15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 RPGRQ92834 1020 aaKnown RBP15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 MASTLQ96GX5 879 aa15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 RBM17Q96I25 401 aaKnown RBP15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
NIF3L1-201ENST00000359683 C1QTNF8P60827 252 aa15.44■□□□□ 0.06
NIF3L1-201ENST00000359683 PTPN12Q05209 780 aaKnown RBP15.44■□□□□ 0.06
NIF3L1-201ENST00000359683 HDAC1Q13547 482 aaPredicted RBP15.44■□□□□ 0.06
NIF3L1-201ENST00000359683 STYK1Q6J9G0 422 aa15.44■□□□□ 0.06
NIF3L1-201ENST00000359683 COPRSQ9NQ92 184 aa15.44■□□□□ 0.06
NIF3L1-201ENST00000359683 KCNA3P22001 575 aa15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 CHRNA5P30532 468 aa15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 CDC5LQ99459 802 aaKnown RBP15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 WWC3Q9ULE0 1092 aa15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 DPEP1P16444 411 aa15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 RPS8P62241 208 aaKnown RBP15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 GRAPQ13588 217 aa15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 GRAPLQ8TC17 118 aaPredicted RBP15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 CELF1Q92879 486 aaKnown RBP15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 ZNF594Q96JF6 807 aaPredicted RBP15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 RWDD1Q9H446 243 aaPredicted RBP15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 NOP58Q9Y2X3 529 aaKnown RBP15.43■□□□□ 0.06
NIF3L1-201ENST00000359683 A0A0G2JLW4 131 aa15.42■□□□□ 0.06
NIF3L1-201ENST00000359683 IGHDP01880 384 aa15.42■□□□□ 0.06
NIF3L1-201ENST00000359683 ALDH1B1P30837 517 aa15.42■□□□□ 0.06
NIF3L1-201ENST00000359683 KLHDC4Q8TBB5 520 aa15.42■□□□□ 0.06
NIF3L1-201ENST00000359683 PPP4R2Q9NY27 417 aa15.42■□□□□ 0.06
NIF3L1-201ENST00000359683 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
NIF3L1-201ENST00000359683 PA2G4Q9UQ80 394 aaKnown RBP15.42■□□□□ 0.06
NIF3L1-201ENST00000359683 COL11A2P13942 1736 aaPredicted RBP15.41■□□□□ 0.06
NIF3L1-201ENST00000359683 BBOX1O75936 387 aa15.41■□□□□ 0.06
NIF3L1-201ENST00000359683 ANKRD18AQ8IVF6 992 aa15.41■□□□□ 0.06
NIF3L1-201ENST00000359683 CNKSR1Q969H4 720 aa15.41■□□□□ 0.06
NIF3L1-201ENST00000359683 ZNF622Q969S3 477 aaKnown RBP eCLIP15.41■□□□□ 0.06
NIF3L1-201ENST00000359683 DCTPP1Q9H773 170 aa15.41■□□□□ 0.06
NIF3L1-201ENST00000359683 BRCA1P38398 1863 aaKnown RBP15.41■□□□□ 0.06
NIF3L1-201ENST00000359683 TAF1P21675 1872 aa15.4■□□□□ 0.06
NIF3L1-201ENST00000359683 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
NIF3L1-201ENST00000359683 TAF7LQ5H9L4 462 aa15.4■□□□□ 0.06
NIF3L1-201ENST00000359683 BSDC1Q9NW68 430 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms