RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 V9GYY5 206 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCDC66A2RUB6 948 aa11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 HOXB7P09629 217 aa11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 ARID5BQ14865 1188 aa11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 KMT5BQ4FZB7 885 aa11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 NYAP1Q6ZVC0 841 aa11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 FILIP1Q7Z7B0 1213 aa11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 BRF1Q92994 677 aa11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 ZSCAN16Q9H4T2 348 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 ESF1Q9H501 851 aaKnown RBP11.68□□□□□ -0.54
TRAPPC2-201ENST00000359680 A0A0D9SFI3 127 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCDC69A6NI79 296 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 ANXA1P04083 346 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 HOXC9P31274 260 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 EIF4A1P60842 406 aaKnown RBP11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 RESTQ13127 1097 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 TERF2Q15554 542 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 C11orf57Q6ZUT1 292 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 PTPRUQ92729 1446 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 JAK2O60674 1132 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 NLRP6P59044 892 aa11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 G3BP1Q13283 466 aaKnown RBP eCLIP11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 NPHP4O75161 1426 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC2-201ENST00000359680 KIF2AO00139 706 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 SLU7O95391 586 aaKnown RBP11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 CEBPZQ03701 1054 aaKnown RBP11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 KRT32Q14532 448 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 ELF2Q15723 593 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCDC73Q6ZRK6 1079 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 GTF3C6Q969F1 213 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCDC8Q9H0W5 538 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 ADCY9O60503 1353 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 DDX11Q96FC9 970 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 BOLA2Q9H3K6 86 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 ALDH1L1O75891 902 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 FBXO38Q6PIJ6 1188 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCAR1Q8IX12 1150 aaKnown RBP11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCAR2Q8N163 923 aaKnown RBP11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 ANO10Q9NW15 660 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
TRAPPC2-201ENST00000359680 KINO60870 393 aaKnown RBP11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 GSDMDP57764 484 aa11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCZ1BP86790 482 aa11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 CCZ1P86791 482 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 SLFNL1Q499Z3 407 aa11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 EAF2Q96CJ1 260 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 MAP3K2Q9Y2U5 619 aa11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 MED23Q9ULK4 1368 aa11.65□□□□□ -0.54
TRAPPC2-201ENST00000359680 TSGA10IPQ3SY00 556 aa11.65□□□□□ -0.55
TRAPPC2-201ENST00000359680 CEP57L1Q8IYX8 460 aa11.65□□□□□ -0.55
TRAPPC2-201ENST00000359680 USHBP1Q8N6Y0 703 aa11.65□□□□□ -0.55
TRAPPC2-201ENST00000359680 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 PIK3C2AO00443 1686 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 FGD1P98174 961 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 ZNF589Q86UQ0 364 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 NEK1Q96PY6 1258 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 NAT10Q9H0A0 1025 aaKnown RBP11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 DBF4Q9UBU7 674 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 ADAMTS13Q76LX8 1427 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 SASH1O94885 1247 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 Q6ZUG5 572 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 CEMIPQ8WUJ3 1361 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 TMEM2Q9UHN6 1383 aa11.64□□□□□ -0.55
TRAPPC2-201ENST00000359680 TEFQ10587 303 aa11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 DHX40Q8IX18 779 aaKnown RBP11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 NPHP1O15259 732 aa11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 TAF5LO75529 589 aa11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 SNW1Q13573 536 aaKnown RBP11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 CWF19L2Q2TBE0 894 aaKnown RBP11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 AOPEPQ8N6M6 819 aa11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 LGR6Q9HBX8 967 aa11.63□□□□□ -0.55
TRAPPC2-201ENST00000359680 DIP2BQ9P265 1576 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 BTBD11A6QL63 1104 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 KCNQ3O43525 872 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 NRDCO43847 1150 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 FOSBP53539 338 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 FAM193AP78312 1265 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 ZRSR1Q15695 479 aaKnown RBP11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 KSR2Q6VAB6 950 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 SIL1Q9H173 461 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 KCND1Q9NSA2 647 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 FAM53CQ9NYF3 392 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 RCOR1Q9UKL0 485 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 MYH15Q9Y2K3 1946 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 JCADQ9P266 1359 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 KDM3BQ7LBC6 1761 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 FAM160A1Q05DH4 1040 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 BMS1Q14692 1282 aaKnown RBP11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 BBXQ8WY36 941 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 ZNF396Q96N95 335 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 GOLPH3LQ9H4A5 285 aa11.62□□□□□ -0.55
TRAPPC2-201ENST00000359680 ERICH4A6NGS2 130 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms