RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 SPAG1Q07617 926 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 GOLGA8AA7E2F4 631 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 GNG11P61952 73 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 SPA17Q15506 151 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 RBM33Q96EV2 1170 aaKnown RBP13.05□□□□□ -0.32
TMC3-201ENST00000359440 CHPF2Q9P2E5 772 aa13.05□□□□□ -0.32
TMC3-201ENST00000359440 POLR1AO95602 1720 aaPredicted RBP13.04□□□□□ -0.32
TMC3-201ENST00000359440 MAP3K12Q12852 859 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 NMIQ13287 307 aaPredicted RBP13.04□□□□□ -0.32
TMC3-201ENST00000359440 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 IVLP07476 585 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 GSPT1P15170 499 aaKnown RBP13.04□□□□□ -0.32
TMC3-201ENST00000359440 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 CLSTN2Q9H4D0 955 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 FBLN1P23142 703 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 TRIM34Q9BYJ4 488 aa13.04□□□□□ -0.32
TMC3-201ENST00000359440 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
TMC3-201ENST00000359440 PREX2Q70Z35 1606 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 GOLIM4O00461 696 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 FGFR1OPO95684 399 aaKnown RBP13.03□□□□□ -0.32
TMC3-201ENST00000359440 IFIT5Q13325 482 aaKnown RBP13.03□□□□□ -0.32
TMC3-201ENST00000359440 Q6ZUG5 572 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 AOPEPQ8N6M6 819 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 OTUD7AQ8TE49 926 aaPredicted RBP13.03□□□□□ -0.32
TMC3-201ENST00000359440 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
TMC3-201ENST00000359440 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
TMC3-201ENST00000359440 STARD3NLO95772 234 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 SOGA3Q5TF21 947 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 DHX32Q7L7V1 743 aaKnown RBP13.03□□□□□ -0.32
TMC3-201ENST00000359440 IMPACTQ9P2X3 320 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 USP19O94966 1318 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 TNRQ92752 1358 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 RGS12O14924 1447 aa13.03□□□□□ -0.32
TMC3-201ENST00000359440 V9GYY5 206 aaPredicted RBP13.03□□□□□ -0.32
TMC3-201ENST00000359440 SPTLC2O15270 562 aa13.02□□□□□ -0.32
TMC3-201ENST00000359440 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.32
TMC3-201ENST00000359440 METAP2P50579 478 aaKnown RBP eCLIP13.02□□□□□ -0.32
TMC3-201ENST00000359440 FKBP15Q5T1M5 1219 aa13.02□□□□□ -0.32
TMC3-201ENST00000359440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.02□□□□□ -0.32
TMC3-201ENST00000359440 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.33
TMC3-201ENST00000359440 BIN1O00499 593 aa13.02□□□□□ -0.33
TMC3-201ENST00000359440 POLR3GO15318 223 aaPredicted RBP13.02□□□□□ -0.33
TMC3-201ENST00000359440 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
TMC3-201ENST00000359440 CEP112Q8N8E3 955 aa13.02□□□□□ -0.33
TMC3-201ENST00000359440 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.33
TMC3-201ENST00000359440 DNAI1Q9UI46 699 aa13.02□□□□□ -0.33
TMC3-201ENST00000359440 IQGAP3Q86VI3 1631 aa13.02□□□□□ -0.33
TMC3-201ENST00000359440 GTF2F1P35269 517 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMC3-201ENST00000359440 IL15P40933 162 aaPredicted RBP13.02□□□□□ -0.33
TMC3-201ENST00000359440 TMTC2Q8N394 836 aa13.02□□□□□ -0.33
TMC3-201ENST00000359440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.02□□□□□ -0.33
TMC3-201ENST00000359440 LAMC1P11047 1609 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 RPS6KB1P23443 525 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 IFIT3O14879 490 aaKnown RBP13.01□□□□□ -0.33
TMC3-201ENST00000359440 ZNF75DP51815 510 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 LUZP1Q86V48 1076 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 CCDC12Q8WUD4 166 aaPredicted RBP13.01□□□□□ -0.33
TMC3-201ENST00000359440 SBNO1A3KN83 1393 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 PLA2R1Q13018 1463 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 PAFAH1B1P43034 410 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 TUBB2AQ13885 445 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 MICALCLQ6ZW33 695 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 IFNL2Q8IZJ0 200 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 TAF4BQ92750 862 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 TUBB2BQ9BVA1 445 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 LRP2BPQ9P2M1 347 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 SHROOM2Q13796 1616 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 KLF18A0A0U1RQI7 1052 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 CKAP4Q07065 602 aaKnown RBP13.01□□□□□ -0.33
TMC3-201ENST00000359440 IQCA1Q86XH1 822 aa13.01□□□□□ -0.33
TMC3-201ENST00000359440 AATKQ6ZMQ8 1374 aa13□□□□□ -0.33
TMC3-201ENST00000359440 MYO1BO43795 1136 aa13□□□□□ -0.33
TMC3-201ENST00000359440 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
TMC3-201ENST00000359440 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
TMC3-201ENST00000359440 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
TMC3-201ENST00000359440 FAM193AP78312 1265 aa13□□□□□ -0.33
TMC3-201ENST00000359440 KRT24Q2M2I5 525 aa13□□□□□ -0.33
TMC3-201ENST00000359440 TOM1L2Q6ZVM7 507 aa13□□□□□ -0.33
TMC3-201ENST00000359440 CTCFLQ8NI51 663 aaPredicted RBP13□□□□□ -0.33
TMC3-201ENST00000359440 SIRT1Q96EB6 747 aa13□□□□□ -0.33
TMC3-201ENST00000359440 TEX13AQ9BXU3 409 aaPredicted RBP13□□□□□ -0.33
TMC3-201ENST00000359440 RMND1Q9NWS8 449 aa13□□□□□ -0.33
TMC3-201ENST00000359440 ARHGEF10O15013 1369 aa13□□□□□ -0.33
TMC3-201ENST00000359440 POLR3DP05423 398 aaPredicted RBP13□□□□□ -0.33
TMC3-201ENST00000359440 CUL4AQ13619 759 aa13□□□□□ -0.33
TMC3-201ENST00000359440 CT47A1Q5JQC4 288 aaPredicted RBP13□□□□□ -0.33
TMC3-201ENST00000359440 GOLGA1Q92805 767 aa13□□□□□ -0.33
TMC3-201ENST00000359440 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
TMC3-201ENST00000359440 IGHMBP2P38935 993 aaKnown RBP13□□□□□ -0.33
TMC3-201ENST00000359440 KLHL10Q6JEL2 608 aa13□□□□□ -0.33
TMC3-201ENST00000359440 CLEC17AQ6ZS10 378 aa13□□□□□ -0.33
TMC3-201ENST00000359440 CCDC175P0C221 793 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms