RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 TRIM5Q9C035 493 aa28.54■■■□□ 2.16
DDX42-201ENST00000359353 PLEKHO1Q53GL0 409 aaPredicted RBP28.54■■■□□ 2.16
DDX42-201ENST00000359353 GTF2F1P35269 517 aaKnown RBP eCLIP28.53■■■□□ 2.164e-8■■□□□ 12.1
DDX42-201ENST00000359353 PGBD1Q96JS3 809 aa28.53■■■□□ 2.16
DDX42-201ENST00000359353 ZHX1Q9UKY1 873 aaPredicted RBP28.53■■■□□ 2.16
DDX42-201ENST00000359353 ESCO1Q5FWF5 840 aa28.53■■■□□ 2.16
DDX42-201ENST00000359353 IGKV5-2P06315 115 aa28.52■■■□□ 2.16
DDX42-201ENST00000359353 PSME1Q06323 249 aa28.52■■■□□ 2.16
DDX42-201ENST00000359353 MED1Q15648 1581 aaPredicted RBP28.52■■■□□ 2.16
DDX42-201ENST00000359353 GOLGA6L6A8MZA4 724 aa28.51■■■□□ 2.16
DDX42-201ENST00000359353 SLFNL1Q499Z3 407 aa28.51■■■□□ 2.16
DDX42-201ENST00000359353 RIC3Q7Z5B4 369 aa28.51■■■□□ 2.16
DDX42-201ENST00000359353 LINS1Q8NG48 757 aa28.51■■■□□ 2.16
DDX42-201ENST00000359353 FTOQ9C0B1 505 aaKnown RBP eCLIP28.51■■■□□ 2.162e-7■■■□□ 15.9
DDX42-201ENST00000359353 HSP90B1P14625 803 aaKnown RBP28.51■■■□□ 2.15
DDX42-201ENST00000359353 COL15A1P39059 1388 aa28.51■■■□□ 2.15
DDX42-201ENST00000359353 RNF20Q5VTR2 975 aa28.5■■■□□ 2.15
DDX42-201ENST00000359353 BRF1Q92994 677 aa28.5■■■□□ 2.15
DDX42-201ENST00000359353 DNAJC2Q99543 621 aaKnown RBP28.5■■■□□ 2.15
DDX42-201ENST00000359353 PDCP20941 246 aa28.5■■■□□ 2.15
DDX42-201ENST00000359353 CHAF1AQ13111 956 aaPredicted RBP28.49■■■□□ 2.15
DDX42-201ENST00000359353 TAF5LO75529 589 aa28.48■■■□□ 2.15
DDX42-201ENST00000359353 FBXW7Q969H0 707 aa28.48■■■□□ 2.15
DDX42-201ENST00000359353 SCAND2PQ9GZW5 306 aaPredicted RBP28.48■■■□□ 2.15
DDX42-201ENST00000359353 NAA30Q147X3 362 aaPredicted RBP28.47■■■□□ 2.15
DDX42-201ENST00000359353 MYD88Q99836 296 aa28.47■■■□□ 2.15
DDX42-201ENST00000359353 ELP1O95163 1332 aa28.47■■■□□ 2.15
DDX42-201ENST00000359353 MED23Q9ULK4 1368 aa28.47■■■□□ 2.15
DDX42-201ENST00000359353 HIP1O00291 1037 aa28.47■■■□□ 2.15
DDX42-201ENST00000359353 ZNF165P49910 485 aa28.47■■■□□ 2.15
DDX42-201ENST00000359353 Q6ZUG5 572 aa28.47■■■□□ 2.15
DDX42-201ENST00000359353 NPHP3Q7Z494 1330 aa28.46■■■□□ 2.15
DDX42-201ENST00000359353 U2AF2P26368 475 aaKnown RBP eCLIP28.46■■■□□ 2.152e-8■■□□□ 12
DDX42-201ENST00000359353 SMAP1Q8IYB5 467 aaPredicted RBP28.46■■■□□ 2.15
DDX42-201ENST00000359353 ERCC4Q92889 916 aaPredicted RBP28.46■■■□□ 2.15
DDX42-201ENST00000359353 CLSTN2Q9H4D0 955 aa28.46■■■□□ 2.15
DDX42-201ENST00000359353 ARID5BQ14865 1188 aa28.45■■■□□ 2.15
DDX42-201ENST00000359353 PDCL2Q8N4E4 241 aa28.45■■■□□ 2.15
DDX42-201ENST00000359353 DBNLQ9UJU6 430 aaKnown RBP28.45■■■□□ 2.15
DDX42-201ENST00000359353 ANKARQ7Z5J8 1434 aa28.45■■■□□ 2.15
DDX42-201ENST00000359353 H3BQV1 296 aa28.45■■■□□ 2.14
DDX42-201ENST00000359353 PDIA6Q15084 440 aa28.45■■■□□ 2.14
DDX42-201ENST00000359353 ANKRD1Q15327 319 aa28.45■■■□□ 2.14
DDX42-201ENST00000359353 CCDC144BQ3MJ40 725 aa28.45■■■□□ 2.14
DDX42-201ENST00000359353 IFFO2Q5TF58 517 aa28.45■■■□□ 2.14
DDX42-201ENST00000359353 CCDC144CPQ8IYA2 1237 aa28.45■■■□□ 2.14
DDX42-201ENST00000359353 THEMISQ8N1K5 641 aaPredicted RBP28.45■■■□□ 2.14
DDX42-201ENST00000359353 ZNF75DP51815 510 aa28.45■■■□□ 2.14
DDX42-201ENST00000359353 DDX46Q7L014 1031 aaKnown RBP28.45■■■□□ 2.14
DDX42-201ENST00000359353 TFCP2Q12800 502 aa28.44■■■□□ 2.14
DDX42-201ENST00000359353 XAGE3Q8WTP9 111 aa28.44■■■□□ 2.14
DDX42-201ENST00000359353 NAP1L2Q9ULW6 460 aaPredicted RBP28.44■■■□□ 2.14
DDX42-201ENST00000359353 AXIN2Q9Y2T1 843 aa28.44■■■□□ 2.14
DDX42-201ENST00000359353 FGD1P98174 961 aa28.43■■■□□ 2.14
DDX42-201ENST00000359353 ANKRD24Q8TF21 1146 aa28.43■■■□□ 2.14
DDX42-201ENST00000359353 IGSF3O75054 1194 aa28.43■■■□□ 2.14
DDX42-201ENST00000359353 ZSCAN25Q6NSZ9 544 aa28.43■■■□□ 2.14
DDX42-201ENST00000359353 GTF3C6Q969F1 213 aa28.43■■■□□ 2.14
DDX42-201ENST00000359353 NEK1Q96PY6 1258 aa28.43■■■□□ 2.14
DDX42-201ENST00000359353 DDX58O95786 925 aaKnown RBP28.42■■■□□ 2.14
DDX42-201ENST00000359353 COPS6Q7L5N1 327 aa28.42■■■□□ 2.14
DDX42-201ENST00000359353 CACTINQ8WUQ7 758 aaKnown RBP28.42■■■□□ 2.14
DDX42-201ENST00000359353 DDX21Q9NR30 783 aaKnown RBP eCLIP28.42■■■□□ 2.14
DDX42-201ENST00000359353 DDX19AQ9NUU7 478 aaKnown RBP28.42■■■□□ 2.14
DDX42-201ENST00000359353 CHD2O14647 1828 aaKnown RBP28.42■■■□□ 2.14
DDX42-201ENST00000359353 A0A0G2JLW4 131 aa28.42■■■□□ 2.14
DDX42-201ENST00000359353 TPM3P06753 285 aa28.42■■■□□ 2.14
DDX42-201ENST00000359353 CHMP4AQ9BY43 222 aa28.42■■■□□ 2.14
DDX42-201ENST00000359353 CLIP2Q9UDT6 1046 aa28.42■■■□□ 2.14
DDX42-201ENST00000359353 NFAT5O94916 1531 aa28.41■■■□□ 2.14
DDX42-201ENST00000359353 CYP21A2P08686 494 aa28.41■■■□□ 2.14
DDX42-201ENST00000359353 GUCY1B3Q02153 619 aa28.41■■■□□ 2.14
DDX42-201ENST00000359353 RESTQ13127 1097 aa28.41■■■□□ 2.14
DDX42-201ENST00000359353 C11orf57Q6ZUT1 292 aaPredicted RBP28.41■■■□□ 2.14
DDX42-201ENST00000359353 ARHGAP23Q9P227 1491 aa28.41■■■□□ 2.14
DDX42-201ENST00000359353 NEURL1BA8MQ27 555 aa28.41■■■□□ 2.14
DDX42-201ENST00000359353 ZSCAN20P17040 1043 aaPredicted RBP28.41■■■□□ 2.14
DDX42-201ENST00000359353 ZNF592Q92610 1267 aa28.41■■■□□ 2.14
DDX42-201ENST00000359353 GCP02774 474 aa28.4■■■□□ 2.14
DDX42-201ENST00000359353 DBNDD2Q9BQY9 259 aa28.4■■■□□ 2.14
DDX42-201ENST00000359353 SLIT1O75093 1534 aa28.4■■■□□ 2.14
DDX42-201ENST00000359353 ATP5J2-PTCD1G3V325 749 aa28.4■■■□□ 2.14
DDX42-201ENST00000359353 PTCD1O75127 700 aaKnown RBP28.4■■■□□ 2.14
DDX42-201ENST00000359353 SCRN1Q12765 414 aa28.4■■■□□ 2.14
DDX42-201ENST00000359353 PLA2G4DQ86XP0 818 aa28.4■■■□□ 2.14
DDX42-201ENST00000359353 CCT2P78371 535 aaKnown RBP28.39■■■□□ 2.14
DDX42-201ENST00000359353 GCKRQ14397 625 aa28.39■■■□□ 2.14
DDX42-201ENST00000359353 AMOTQ4VCS5 1084 aa28.39■■■□□ 2.14
DDX42-201ENST00000359353 ORAI2Q96SN7 254 aa28.39■■■□□ 2.14
DDX42-201ENST00000359353 USP16Q9Y5T5 823 aa28.39■■■□□ 2.14
DDX42-201ENST00000359353 LMO7Q8WWI1 1683 aa28.39■■■□□ 2.14
DDX42-201ENST00000359353 TNNT1P13805 278 aa28.39■■■□□ 2.13
DDX42-201ENST00000359353 STOX1Q6ZVD7 989 aa28.39■■■□□ 2.13
DDX42-201ENST00000359353 CHST3Q7LGC8 479 aa28.39■■■□□ 2.13
DDX42-201ENST00000359353 UBE3BQ7Z3V4 1068 aa28.39■■■□□ 2.13
DDX42-201ENST00000359353 SNRKQ9NRH2 765 aa28.39■■■□□ 2.13
DDX42-201ENST00000359353 ZNF609O15014 1411 aa28.38■■■□□ 2.13
DDX42-201ENST00000359353 NCOA5Q9HCD5 579 aaKnown RBP28.38■■■□□ 2.13
DDX42-201ENST00000359353 HDAC5Q9UQL6 1122 aa28.38■■■□□ 2.13
DDX42-201ENST00000359353 NEXNQ0ZGT2 675 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms