RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 LAMB4A4D0S4 1761 aa21.17■□□□□ 0.98
CDK11A-204ENST00000358779 KRT85P78386 507 aa21.17■□□□□ 0.98
CDK11A-204ENST00000358779 TSGA10IPQ3SY00 556 aa21.17■□□□□ 0.98
CDK11A-204ENST00000358779 TNNI3KQ59H18 835 aa21.17■□□□□ 0.98
CDK11A-204ENST00000358779 IFNL2Q8IZJ0 200 aa21.17■□□□□ 0.98
CDK11A-204ENST00000358779 FPGT-TNNI3KV9GXZ4 949 aa21.17■□□□□ 0.98
CDK11A-204ENST00000358779 PKD1L3Q7Z443 1732 aa21.16■□□□□ 0.98
CDK11A-204ENST00000358779 TAF5LO75529 589 aa21.16■□□□□ 0.98
CDK11A-204ENST00000358779 SNRPA1P09661 255 aaKnown RBP21.16■□□□□ 0.98
CDK11A-204ENST00000358779 ATP5JP18859 108 aa21.16■□□□□ 0.98
CDK11A-204ENST00000358779 PTPN12Q05209 780 aaKnown RBP21.16■□□□□ 0.98
CDK11A-204ENST00000358779 TTC5Q8N0Z6 440 aa21.16■□□□□ 0.98
CDK11A-204ENST00000358779 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.16■□□□□ 0.98
CDK11A-204ENST00000358779 USP16Q9Y5T5 823 aa21.16■□□□□ 0.98
CDK11A-204ENST00000358779 COL15A1P39059 1388 aa21.16■□□□□ 0.98
CDK11A-204ENST00000358779 RFX7Q2KHR2 1363 aa21.16■□□□□ 0.98
CDK11A-204ENST00000358779 JARID2Q92833 1246 aaPredicted RBP21.16■□□□□ 0.98
CDK11A-204ENST00000358779 PIP4K2AP48426 406 aaPredicted RBP21.15■□□□□ 0.98
CDK11A-204ENST00000358779 TFCP2Q12800 502 aa21.15■□□□□ 0.98
CDK11A-204ENST00000358779 TTC6Q86TZ1 520 aa21.15■□□□□ 0.98
CDK11A-204ENST00000358779 FERMT3Q86UX7 667 aa21.15■□□□□ 0.98
CDK11A-204ENST00000358779 RABL6Q3YEC7 729 aaPredicted RBP21.15■□□□□ 0.98
CDK11A-204ENST00000358779 USPL1Q5W0Q7 1092 aa21.15■□□□□ 0.98
CDK11A-204ENST00000358779 UBE3BQ7Z3V4 1068 aa21.15■□□□□ 0.98
CDK11A-204ENST00000358779 GLI3P10071 1580 aa21.15■□□□□ 0.98
CDK11A-204ENST00000358779 ELP1O95163 1332 aa21.14■□□□□ 0.98
CDK11A-204ENST00000358779 KDM4AO75164 1064 aa21.14■□□□□ 0.97
CDK11A-204ENST00000358779 ZNF609O15014 1411 aa21.14■□□□□ 0.97
CDK11A-204ENST00000358779 KRT32Q14532 448 aa21.13■□□□□ 0.97
CDK11A-204ENST00000358779 DCAF5Q96JK2 942 aa21.13■□□□□ 0.97
CDK11A-204ENST00000358779 FMNL2Q96PY5 1086 aa21.13■□□□□ 0.97
CDK11A-204ENST00000358779 C19orf44Q9H6X5 657 aa21.13■□□□□ 0.97
CDK11A-204ENST00000358779 UQCRHLA0A096LP55 91 aa21.13■□□□□ 0.97
CDK11A-204ENST00000358779 UQCRHP07919 91 aa21.13■□□□□ 0.97
CDK11A-204ENST00000358779 CSB-PGBD3P0DP91 1061 aa21.12■□□□□ 0.97
CDK11A-204ENST00000358779 STK3Q13188 491 aa21.12■□□□□ 0.97
CDK11A-204ENST00000358779 MPNDQ8N594 471 aa21.12■□□□□ 0.97
CDK11A-204ENST00000358779 PLEKHG2Q9H7P9 1386 aa21.12■□□□□ 0.97
CDK11A-204ENST00000358779 FAM173BQ6P4H8 233 aa21.12■□□□□ 0.97
CDK11A-204ENST00000358779 NDUFB9Q9Y6M9 179 aa21.12■□□□□ 0.97
CDK11A-204ENST00000358779 CYP27B1O15528 508 aa21.11■□□□□ 0.97
CDK11A-204ENST00000358779 SASS6Q6UVJ0 657 aa21.11■□□□□ 0.97
CDK11A-204ENST00000358779 DNAJC2Q99543 621 aaKnown RBP21.11■□□□□ 0.97
CDK11A-204ENST00000358779 DBNDD2Q9BQY9 259 aa21.11■□□□□ 0.97
CDK11A-204ENST00000358779 PARP4Q9UKK3 1724 aaKnown RBP21.11■□□□□ 0.97
CDK11A-204ENST00000358779 A0A087WZG4 1122 aa21.1■□□□□ 0.97
CDK11A-204ENST00000358779 CCDC192P0DO97 292 aa21.1■□□□□ 0.97
CDK11A-204ENST00000358779 ZNF830Q96NB3 372 aaPredicted RBP21.1■□□□□ 0.97
CDK11A-204ENST00000358779 ATP5J2-PTCD1G3V325 749 aa21.1■□□□□ 0.97
CDK11A-204ENST00000358779 PTCD1O75127 700 aaKnown RBP21.1■□□□□ 0.97
CDK11A-204ENST00000358779 CCDC129Q6ZRS4 1044 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 PIBF1Q8WXW3 757 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 NEK1Q96PY6 1258 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 HAUS7Q99871 368 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 U3KPZ7 1027 aaPredicted RBP21.09■□□□□ 0.97
CDK11A-204ENST00000358779 LAMA4Q16363 1823 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 LIG1P18858 919 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 CASP7P55210 303 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 GTF3C6Q969F1 213 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 SCAND2PQ9GZW5 306 aaPredicted RBP21.09■□□□□ 0.97
CDK11A-204ENST00000358779 NUP62CLQ9H1M0 184 aa21.09■□□□□ 0.97
CDK11A-204ENST00000358779 TTC12Q9H892 705 aaPredicted RBP21.08■□□□□ 0.97
CDK11A-204ENST00000358779 PLCB2Q00722 1185 aa21.08■□□□□ 0.96
CDK11A-204ENST00000358779 MAP3K11Q16584 847 aa21.08■□□□□ 0.96
CDK11A-204ENST00000358779 PLBD2Q8NHP8 589 aa21.08■□□□□ 0.96
CDK11A-204ENST00000358779 DDX17Q92841 729 aaKnown RBP21.08■□□□□ 0.96
CDK11A-204ENST00000358779 CHMP3Q9Y3E7 222 aa21.08■□□□□ 0.96
CDK11A-204ENST00000358779 AP5Z1O43299 807 aa21.07■□□□□ 0.96
CDK11A-204ENST00000358779 CHGBP05060 677 aa21.07■□□□□ 0.96
CDK11A-204ENST00000358779 MCMDC2Q4G0Z9 681 aa21.07■□□□□ 0.96
CDK11A-204ENST00000358779 GLIPR1L2Q4G1C9 344 aa21.07■□□□□ 0.96
CDK11A-204ENST00000358779 SPATA32Q96LK8 384 aa21.07■□□□□ 0.96
CDK11A-204ENST00000358779 SEC62Q99442 399 aaKnown RBP21.07■□□□□ 0.96
CDK11A-204ENST00000358779 NUP188Q5SRE5 1749 aa21.07■□□□□ 0.96
CDK11A-204ENST00000358779 PDCL3Q9H2J4 239 aa21.07■□□□□ 0.96
CDK11A-204ENST00000358779 TJP1Q07157 1748 aa21.06■□□□□ 0.96
CDK11A-204ENST00000358779 JAK2O60674 1132 aa21.06■□□□□ 0.96
CDK11A-204ENST00000358779 CABP4P57796 275 aa21.06■□□□□ 0.96
CDK11A-204ENST00000358779 Q6ZUG5 572 aa21.06■□□□□ 0.96
CDK11A-204ENST00000358779 DDX46Q7L014 1031 aaKnown RBP21.06■□□□□ 0.96
CDK11A-204ENST00000358779 CYP21A2P08686 494 aa21.06■□□□□ 0.96
CDK11A-204ENST00000358779 CHRNA2Q15822 529 aa21.06■□□□□ 0.96
CDK11A-204ENST00000358779 LMBR1LQ6UX01 489 aa21.06■□□□□ 0.96
CDK11A-204ENST00000358779 LEO1Q8WVC0 666 aaPredicted RBP21.06■□□□□ 0.96
CDK11A-204ENST00000358779 HSP90B1P14625 803 aaKnown RBP21.05■□□□□ 0.96
CDK11A-204ENST00000358779 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
CDK11A-204ENST00000358779 CABLES1Q8TDN4 633 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 TFIP11Q9UBB9 837 aaKnown RBP21.05■□□□□ 0.96
CDK11A-204ENST00000358779 SH3TC1Q8TE82 1336 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 PALLDQ8WX93 1383 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 MYH15Q9Y2K3 1946 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 TNS3Q68CZ2 1445 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 GOLGA6L4A6NEF3 574 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 ATF3P18847 181 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 NOLC1Q14978 699 aaKnown RBP eCLIP21.05■□□□□ 0.96
CDK11A-204ENST00000358779 CAMK4Q16566 473 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 KBTBD3Q8NAB2 608 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 FAM200AQ8TCP9 573 aa21.05■□□□□ 0.96
CDK11A-204ENST00000358779 DYNC1I1O14576 645 aa21.04■□□□□ 0.96
CDK11A-204ENST00000358779 TYRO3Q06418 890 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms