RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 KAZALD1Q96I82 304 aa19.08■□□□□ 0.65
TPM1-206ENST00000358278 FOXO4P98177 505 aa19.08■□□□□ 0.64
TPM1-206ENST00000358278 CCDC152Q4G0S7 254 aa19.08■□□□□ 0.64
TPM1-206ENST00000358278 EXOC6Q8TAG9 804 aa19.08■□□□□ 0.64
TPM1-206ENST00000358278 RPGRQ92834 1020 aaKnown RBP19.08■□□□□ 0.64
TPM1-206ENST00000358278 CCDC85AQ96PX6 553 aaPredicted RBP19.08■□□□□ 0.64
TPM1-206ENST00000358278 CD2APQ9Y5K6 639 aa19.08■□□□□ 0.64
TPM1-206ENST00000358278 H0YIN7 160 aa19.07■□□□□ 0.64
TPM1-206ENST00000358278 LMBR1LQ6UX01 489 aa19.07■□□□□ 0.64
TPM1-206ENST00000358278 TTLL11Q8NHH1 800 aa19.07■□□□□ 0.64
TPM1-206ENST00000358278 PDZRN3Q9UPQ7 1066 aa19.07■□□□□ 0.64
TPM1-206ENST00000358278 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
TPM1-206ENST00000358278 CRY2Q49AN0 593 aa19.06■□□□□ 0.64
TPM1-206ENST00000358278 C2CD5Q86YS7 1000 aa19.06■□□□□ 0.64
TPM1-206ENST00000358278 KLRG2A4D1S0 409 aaPredicted RBP19.05■□□□□ 0.64
TPM1-206ENST00000358278 FAM161AQ3B820 660 aa19.05■□□□□ 0.64
TPM1-206ENST00000358278 ANKRD44Q8N8A2 993 aa19.05■□□□□ 0.64
TPM1-206ENST00000358278 FHDC1Q9C0D6 1143 aaPredicted RBP19.05■□□□□ 0.64
TPM1-206ENST00000358278 SRGNP10124 158 aa19.05■□□□□ 0.64
TPM1-206ENST00000358278 CHRNA5P30532 468 aa19.05■□□□□ 0.64
TPM1-206ENST00000358278 TGFB2P61812 414 aa19.05■□□□□ 0.64
TPM1-206ENST00000358278 RABL6Q3YEC7 729 aaPredicted RBP19.05■□□□□ 0.64
TPM1-206ENST00000358278 DDX46Q7L014 1031 aaKnown RBP19.05■□□□□ 0.64
TPM1-206ENST00000358278 GREM2Q9H772 168 aa19.05■□□□□ 0.64
TPM1-206ENST00000358278 CSF1RP07333 972 aa19.04■□□□□ 0.64
TPM1-206ENST00000358278 NPR1P16066 1061 aa19.04■□□□□ 0.64
TPM1-206ENST00000358278 AAMPQ13685 434 aa19.04■□□□□ 0.64
TPM1-206ENST00000358278 SLX4Q8IY92 1834 aa19.03■□□□□ 0.64
TPM1-206ENST00000358278 RTL9Q8NET4 1388 aa19.03■□□□□ 0.64
TPM1-206ENST00000358278 ZNF622Q969S3 477 aaKnown RBP eCLIP19.03■□□□□ 0.646e-7■■□□□ 13.8
TPM1-206ENST00000358278 MASTLQ96GX5 879 aa19.03■□□□□ 0.64
TPM1-206ENST00000358278 RBM17Q96I25 401 aaKnown RBP19.03■□□□□ 0.64
TPM1-206ENST00000358278 A0A0G2JLW4 131 aa19.03■□□□□ 0.64
TPM1-206ENST00000358278 DPEP1P16444 411 aa19.03■□□□□ 0.64
TPM1-206ENST00000358278 ITGA6P23229 1130 aa19.03■□□□□ 0.64
TPM1-206ENST00000358278 IFIT5Q13325 482 aaKnown RBP19.03■□□□□ 0.64
TPM1-206ENST00000358278 CCDC57Q2TAC2 916 aa19.03■□□□□ 0.64
TPM1-206ENST00000358278 SRGAP3O43295 1099 aa19.02■□□□□ 0.63
TPM1-206ENST00000358278 CEP85Q6P2H3 762 aa19.02■□□□□ 0.63
TPM1-206ENST00000358278 COL4A1P02462 1669 aa19.02■□□□□ 0.63
TPM1-206ENST00000358278 ANKRD18BA2A2Z9 1011 aa19.01■□□□□ 0.63
TPM1-206ENST00000358278 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
TPM1-206ENST00000358278 STYK1Q6J9G0 422 aa19.01■□□□□ 0.63
TPM1-206ENST00000358278 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
TPM1-206ENST00000358278 CDC5LQ99459 802 aaKnown RBP19.01■□□□□ 0.63
TPM1-206ENST00000358278 SEC31BQ9NQW1 1179 aa19.01■□□□□ 0.63
TPM1-206ENST00000358278 ARFGEF1Q9Y6D6 1849 aa19.01■□□□□ 0.63
TPM1-206ENST00000358278 HOXA10P31260 410 aaPredicted RBP19■□□□□ 0.63
TPM1-206ENST00000358278 MTX1Q13505 466 aa19■□□□□ 0.63
TPM1-206ENST00000358278 A0A1B0GUL6 1792 aa19■□□□□ 0.63
TPM1-206ENST00000358278 ALDH1B1P30837 517 aa19■□□□□ 0.63
TPM1-206ENST00000358278 RPAP2Q8IXW5 612 aaPredicted RBP19■□□□□ 0.63
TPM1-206ENST00000358278 CRAMP1Q96RY5 1269 aa19■□□□□ 0.63
TPM1-206ENST00000358278 SYT17Q9BSW7 474 aa19■□□□□ 0.63
TPM1-206ENST00000358278 PNMA6EA0A0J9YXQ4 647 aa18.99■□□□□ 0.63
TPM1-206ENST00000358278 ATP8B2P98198 1209 aa18.99■□□□□ 0.63
TPM1-206ENST00000358278 GRAPQ13588 217 aa18.99■□□□□ 0.63
TPM1-206ENST00000358278 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
TPM1-206ENST00000358278 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
TPM1-206ENST00000358278 HMMRO75330 724 aa18.98■□□□□ 0.63
TPM1-206ENST00000358278 ANKRD18AQ8IVF6 992 aa18.98■□□□□ 0.63
TPM1-206ENST00000358278 PIM2Q9P1W9 311 aa18.98■□□□□ 0.63
TPM1-206ENST00000358278 LRRC37AA6NMS7 1700 aa18.98■□□□□ 0.63
TPM1-206ENST00000358278 KCNA3P22001 575 aa18.97■□□□□ 0.63
TPM1-206ENST00000358278 IGHMBP2P38935 993 aaKnown RBP18.97■□□□□ 0.63
TPM1-206ENST00000358278 TTLL6Q8N841 843 aa18.97■□□□□ 0.63
TPM1-206ENST00000358278 CELF1Q92879 486 aaKnown RBP18.97■□□□□ 0.63
TPM1-206ENST00000358278 WWC3Q9ULE0 1092 aa18.97■□□□□ 0.63
TPM1-206ENST00000358278 PRPF40BQ6NWY9 871 aaKnown RBP18.97■□□□□ 0.63
TPM1-206ENST00000358278 ZNF594Q96JF6 807 aaPredicted RBP18.97■□□□□ 0.63
TPM1-206ENST00000358278 MPHOSPH8Q99549 860 aa18.97■□□□□ 0.63
TPM1-206ENST00000358278 PCDHB15Q9Y5E8 787 aa18.97■□□□□ 0.63
TPM1-206ENST00000358278 UTRNP46939 3433 aa18.96■□□□□ 0.63
TPM1-206ENST00000358278 RPS8P62241 208 aaKnown RBP18.96■□□□□ 0.63
TPM1-206ENST00000358278 KLHDC4Q8TBB5 520 aa18.96■□□□□ 0.63
TPM1-206ENST00000358278 SSH3Q8TE77 659 aa18.96■□□□□ 0.63
TPM1-206ENST00000358278 PPEF1O14829 653 aaPredicted RBP18.95■□□□□ 0.62
TPM1-206ENST00000358278 BBOX1O75936 387 aa18.94■□□□□ 0.62
TPM1-206ENST00000358278 RFX5P48382 616 aaPredicted RBP18.94■□□□□ 0.62
TPM1-206ENST00000358278 PTPN12Q05209 780 aaKnown RBP18.94■□□□□ 0.62
TPM1-206ENST00000358278 POLA2Q14181 598 aa18.94■□□□□ 0.62
TPM1-206ENST00000358278 DALRD3Q5D0E6 543 aaKnown RBP18.94■□□□□ 0.62
TPM1-206ENST00000358278 LDHAL6AQ6ZMR3 332 aa18.94■□□□□ 0.62
TPM1-206ENST00000358278 SIRT2Q8IXJ6 389 aa18.94■□□□□ 0.62
TPM1-206ENST00000358278 SIL1Q9H173 461 aa18.94■□□□□ 0.62
TPM1-206ENST00000358278 PA2G4Q9UQ80 394 aaKnown RBP18.94■□□□□ 0.62
TPM1-206ENST00000358278 CNNM1Q9NRU3 951 aa18.94■□□□□ 0.62
TPM1-206ENST00000358278 TMC4Q7Z404 712 aa18.93■□□□□ 0.62
TPM1-206ENST00000358278 TMX4Q9H1E5 349 aaPredicted RBP18.93■□□□□ 0.62
TPM1-206ENST00000358278 COPRSQ9NQ92 184 aa18.93■□□□□ 0.62
TPM1-206ENST00000358278 BSDC1Q9NW68 430 aaPredicted RBP18.93■□□□□ 0.62
TPM1-206ENST00000358278 BCS1LQ9Y276 419 aa18.93■□□□□ 0.62
TPM1-206ENST00000358278 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
TPM1-206ENST00000358278 FER1L6Q2WGJ9 1857 aa18.92■□□□□ 0.62
TPM1-206ENST00000358278 SURF6O75683 361 aaKnown RBP18.91■□□□□ 0.62
TPM1-206ENST00000358278 OS9Q13438 667 aaPredicted RBP18.91■□□□□ 0.62
TPM1-206ENST00000358278 PUS3Q9BZE2 481 aaKnown RBP18.91■□□□□ 0.62
TPM1-206ENST00000358278 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
TPM1-206ENST00000358278 EYA2O00167 538 aa18.9■□□□□ 0.62
TPM1-206ENST00000358278 LRRC24Q50LG9 513 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms