RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 HDAC5Q9UQL6 1122 aa18.63■□□□□ 0.57
CCNE1-202ENST00000357943 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
CCNE1-202ENST00000357943 LAMB2P55268 1798 aa18.62■□□□□ 0.57
CCNE1-202ENST00000357943 CHRNA5P30532 468 aa18.62■□□□□ 0.57
CCNE1-202ENST00000357943 FHDC1Q9C0D6 1143 aaPredicted RBP18.62■□□□□ 0.57
CCNE1-202ENST00000357943 GREM2Q9H772 168 aa18.62■□□□□ 0.57
CCNE1-202ENST00000357943 SRGNP10124 158 aa18.61■□□□□ 0.57
CCNE1-202ENST00000357943 FAM161AQ3B820 660 aa18.61■□□□□ 0.57
CCNE1-202ENST00000357943 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
CCNE1-202ENST00000357943 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
CCNE1-202ENST00000357943 CHMP3Q9Y3E7 222 aa18.61■□□□□ 0.57
CCNE1-202ENST00000357943 KIF13BQ9NQT8 1826 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 A0A0G2JLW4 131 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 H0YIN7 160 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 TGFB2P61812 414 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 SEC31BQ9NQW1 1179 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 DPEP1P16444 411 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 NLGN2Q8NFZ4 835 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 RPGRQ92834 1020 aaKnown RBP18.6■□□□□ 0.57
CCNE1-202ENST00000357943 GTF3C3Q9Y5Q9 886 aa18.6■□□□□ 0.57
CCNE1-202ENST00000357943 PNMA6EA0A0J9YXQ4 647 aa18.59■□□□□ 0.57
CCNE1-202ENST00000357943 KCNA3P22001 575 aa18.59■□□□□ 0.57
CCNE1-202ENST00000357943 ITGA6P23229 1130 aa18.59■□□□□ 0.57
CCNE1-202ENST00000357943 CEP85Q6P2H3 762 aa18.59■□□□□ 0.57
CCNE1-202ENST00000357943 COL11A2P13942 1736 aaPredicted RBP18.58■□□□□ 0.57
CCNE1-202ENST00000357943 NEFLP07196 543 aa18.58■□□□□ 0.56
CCNE1-202ENST00000357943 MTX1Q13505 466 aa18.58■□□□□ 0.56
CCNE1-202ENST00000357943 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCNE1-202ENST00000357943 MASTLQ96GX5 879 aa18.58■□□□□ 0.56
CCNE1-202ENST00000357943 SYT17Q9BSW7 474 aa18.58■□□□□ 0.56
CCNE1-202ENST00000357943 PCDHB15Q9Y5E8 787 aa18.58■□□□□ 0.56
CCNE1-202ENST00000357943 MYH3P11055 1940 aa18.57■□□□□ 0.56
CCNE1-202ENST00000357943 LRP5O75197 1615 aa18.57■□□□□ 0.56
CCNE1-202ENST00000357943 SRGAP3O43295 1099 aa18.57■□□□□ 0.56
CCNE1-202ENST00000357943 NPR1P16066 1061 aa18.57■□□□□ 0.56
CCNE1-202ENST00000357943 HOXA10P31260 410 aaPredicted RBP18.57■□□□□ 0.56
CCNE1-202ENST00000357943 IFIT5Q13325 482 aaKnown RBP18.57■□□□□ 0.56
CCNE1-202ENST00000357943 DDX46Q7L014 1031 aaKnown RBP18.57■□□□□ 0.56
CCNE1-202ENST00000357943 PDZRN3Q9UPQ7 1066 aa18.57■□□□□ 0.56
CCNE1-202ENST00000357943 RTL9Q8NET4 1388 aa18.57■□□□□ 0.56
CCNE1-202ENST00000357943 ATP8B2P98198 1209 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 CCDC57Q2TAC2 916 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 SIRT2Q8IXJ6 389 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 CELF1Q92879 486 aaKnown RBP18.56■□□□□ 0.56
CCNE1-202ENST00000357943 RBM17Q96I25 401 aaKnown RBP18.56■□□□□ 0.56
CCNE1-202ENST00000357943 COL4A1P02462 1669 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 KIAA1551Q9HCM1 1747 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 ANKRD18BA2A2Z9 1011 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 KLHDC4Q8TBB5 520 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 WWC3Q9ULE0 1092 aa18.56■□□□□ 0.56
CCNE1-202ENST00000357943 RFX5P48382 616 aaPredicted RBP18.55■□□□□ 0.56
CCNE1-202ENST00000357943 GRAPQ13588 217 aa18.55■□□□□ 0.56
CCNE1-202ENST00000357943 AAMPQ13685 434 aa18.55■□□□□ 0.56
CCNE1-202ENST00000357943 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
CCNE1-202ENST00000357943 RPAP2Q8IXW5 612 aaPredicted RBP18.55■□□□□ 0.56
CCNE1-202ENST00000357943 GRAPLQ8TC17 118 aaPredicted RBP18.55■□□□□ 0.56
CCNE1-202ENST00000357943 ZNF594Q96JF6 807 aaPredicted RBP18.55■□□□□ 0.56
CCNE1-202ENST00000357943 CRAMP1Q96RY5 1269 aa18.54■□□□□ 0.56
CCNE1-202ENST00000357943 ALDH1B1P30837 517 aa18.53■□□□□ 0.56
CCNE1-202ENST00000357943 PTPN12Q05209 780 aaKnown RBP18.53■□□□□ 0.56
CCNE1-202ENST00000357943 POLA2Q14181 598 aa18.53■□□□□ 0.56
CCNE1-202ENST00000357943 SLC51AQ86UW1 340 aa18.53■□□□□ 0.56
CCNE1-202ENST00000357943 SSH3Q8TE77 659 aa18.53■□□□□ 0.56
CCNE1-202ENST00000357943 CDC5LQ99459 802 aaKnown RBP18.53■□□□□ 0.56
CCNE1-202ENST00000357943 PA2G4Q9UQ80 394 aaKnown RBP18.53■□□□□ 0.56
CCNE1-202ENST00000357943 RPS8P62241 208 aaKnown RBP18.52■□□□□ 0.56
CCNE1-202ENST00000357943 ANKRD18AQ8IVF6 992 aa18.52■□□□□ 0.56
CCNE1-202ENST00000357943 PIM2Q9P1W9 311 aa18.52■□□□□ 0.56
CCNE1-202ENST00000357943 TAF1P21675 1872 aa18.52■□□□□ 0.56
CCNE1-202ENST00000357943 TAF7LQ5H9L4 462 aa18.52■□□□□ 0.55
CCNE1-202ENST00000357943 PRPF40BQ6NWY9 871 aaKnown RBP18.52■□□□□ 0.55
CCNE1-202ENST00000357943 TTLL6Q8N841 843 aa18.52■□□□□ 0.55
CCNE1-202ENST00000357943 CNKSR1Q969H4 720 aa18.52■□□□□ 0.55
CCNE1-202ENST00000357943 DLEC1Q9Y238 1755 aa18.51■□□□□ 0.55
CCNE1-202ENST00000357943 BBOX1O75936 387 aa18.5■□□□□ 0.55
CCNE1-202ENST00000357943 IGHMBP2P38935 993 aaKnown RBP18.5■□□□□ 0.55
CCNE1-202ENST00000357943 MPHOSPH8Q99549 860 aa18.5■□□□□ 0.55
CCNE1-202ENST00000357943 PUS3Q9BZE2 481 aaKnown RBP18.5■□□□□ 0.55
CCNE1-202ENST00000357943 SIL1Q9H173 461 aa18.5■□□□□ 0.55
CCNE1-202ENST00000357943 COPRSQ9NQ92 184 aa18.5■□□□□ 0.55
CCNE1-202ENST00000357943 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
CCNE1-202ENST00000357943 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
CCNE1-202ENST00000357943 LDHAL6AQ6ZMR3 332 aa18.49■□□□□ 0.55
CCNE1-202ENST00000357943 BSDC1Q9NW68 430 aaPredicted RBP18.49■□□□□ 0.55
CCNE1-202ENST00000357943 HMMRO75330 724 aa18.49■□□□□ 0.55
CCNE1-202ENST00000357943 DALRD3Q5D0E6 543 aaKnown RBP18.49■□□□□ 0.55
CCNE1-202ENST00000357943 OLFM4Q6UX06 510 aa18.49■□□□□ 0.55
CCNE1-202ENST00000357943 ZNF219Q9P2Y4 722 aaPredicted RBP18.49■□□□□ 0.55
CCNE1-202ENST00000357943 CNNM1Q9NRU3 951 aa18.48■□□□□ 0.55
CCNE1-202ENST00000357943 BCS1LQ9Y276 419 aa18.48■□□□□ 0.55
CCNE1-202ENST00000357943 SLX4Q8IY92 1834 aa18.47■□□□□ 0.55
CCNE1-202ENST00000357943 C7orf43Q8WVR3 580 aa18.47■□□□□ 0.55
CCNE1-202ENST00000357943 RIPOR2Q9Y4F9 1068 aa18.47■□□□□ 0.55
CCNE1-202ENST00000357943 BRCA1P38398 1863 aaKnown RBP18.47■□□□□ 0.55
CCNE1-202ENST00000357943 EYA2O00167 538 aa18.46■□□□□ 0.55
CCNE1-202ENST00000357943 C21orf2O43822 256 aa18.46■□□□□ 0.55
CCNE1-202ENST00000357943 SURF6O75683 361 aaKnown RBP18.46■□□□□ 0.55
CCNE1-202ENST00000357943 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
CCNE1-202ENST00000357943 MINPP1Q9UNW1 487 aa18.46■□□□□ 0.55
CCNE1-202ENST00000357943 EXOC6BQ9Y2D4 811 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms