RNA–Protein interactions for RNA: ENST00000357714.5

CD46-204, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-204ENST00000357714 CHMP4AQ9BY43 222 aa9.02□□□□□ -0.97
CD46-204ENST00000357714 KDRP35968 1356 aa9.02□□□□□ -0.97
CD46-204ENST00000357714 USP6P35125 1406 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 ZRSR1Q15695 479 aaKnown RBP9.01□□□□□ -0.97
CD46-204ENST00000357714 NUTM2GQ5VZR2 741 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 NYAP1Q6ZVC0 841 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 CCAR2Q8N163 923 aaKnown RBP9.01□□□□□ -0.97
CD46-204ENST00000357714 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 PXDNLA1KZ92 1463 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 CTAGE5O15320 804 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 NLRP6P59044 892 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 CEP57L1Q8IYX8 460 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
CD46-204ENST00000357714 ST7Q9NRC1 585 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 ANO10Q9NW15 660 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 TUBGCP6Q96RT7 1819 aa9.01□□□□□ -0.97
CD46-204ENST00000357714 USP31Q70CQ4 1352 aa9□□□□□ -0.97
CD46-204ENST00000357714 KIF2AO00139 706 aaPredicted RBP9□□□□□ -0.97
CD46-204ENST00000357714 SNW1Q13573 536 aaKnown RBP9□□□□□ -0.97
CD46-204ENST00000357714 CYB5RLQ6IPT4 315 aa9□□□□□ -0.97
CD46-204ENST00000357714 USHBP1Q8N6Y0 703 aa9□□□□□ -0.97
CD46-204ENST00000357714 SYTL4Q96C24 671 aaPredicted RBP9□□□□□ -0.97
CD46-204ENST00000357714 TIGD1Q96MW7 591 aa9□□□□□ -0.97
CD46-204ENST00000357714 SIL1Q9H173 461 aa9□□□□□ -0.97
CD46-204ENST00000357714 ZSCAN16Q9H4T2 348 aaPredicted RBP9□□□□□ -0.97
CD46-204ENST00000357714 NRDCO43847 1150 aa9□□□□□ -0.97
CD46-204ENST00000357714 CCZ1BP86790 482 aa9□□□□□ -0.97
CD46-204ENST00000357714 CCZ1P86791 482 aaPredicted RBP9□□□□□ -0.97
CD46-204ENST00000357714 RESTQ13127 1097 aa9□□□□□ -0.97
CD46-204ENST00000357714 AEBP2Q6ZN18 517 aaPredicted RBP9□□□□□ -0.97
CD46-204ENST00000357714 AOPEPQ8N6M6 819 aa9□□□□□ -0.97
CD46-204ENST00000357714 ERCC4Q92889 916 aaPredicted RBP9□□□□□ -0.97
CD46-204ENST00000357714 EAF2Q96CJ1 260 aaPredicted RBP9□□□□□ -0.97
CD46-204ENST00000357714 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
CD46-204ENST00000357714 ME1P48163 572 aa9□□□□□ -0.97
CD46-204ENST00000357714 BMS1Q14692 1282 aaKnown RBP9□□□□□ -0.97
CD46-204ENST00000357714 ERCC6LQ2NKX8 1250 aa9□□□□□ -0.97
CD46-204ENST00000357714 GTF3C6Q969F1 213 aa9□□□□□ -0.97
CD46-204ENST00000357714 SDF4Q9BRK5 362 aa9□□□□□ -0.97
CD46-204ENST00000357714 NOL10Q9BSC4 688 aaKnown RBP9□□□□□ -0.97
CD46-204ENST00000357714 FTOQ9C0B1 505 aaKnown RBP eCLIP9□□□□□ -0.97
CD46-204ENST00000357714 HMG20BQ9P0W2 317 aa9□□□□□ -0.97
CD46-204ENST00000357714 HDAC5Q9UQL6 1122 aa9□□□□□ -0.97
CD46-204ENST00000357714 C3P01024 1663 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 SMC2O95347 1197 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 GSDMDP57764 484 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 GORABQ5T7V8 394 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 Q6ZUG5 572 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 ZNF589Q86UQ0 364 aaPredicted RBP8.99□□□□□ -0.97
CD46-204ENST00000357714 HOMER1Q86YM7 354 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 NEK1Q96PY6 1258 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 LRRC2Q9BYS8 371 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 NAT10Q9H0A0 1025 aaKnown RBP8.99□□□□□ -0.97
CD46-204ENST00000357714 MAP3K2Q9Y2U5 619 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 CEP170BQ9Y4F5 1589 aaPredicted RBP8.99□□□□□ -0.97
CD46-204ENST00000357714 MON2Q7Z3U7 1717 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 GIGYF1O75420 1035 aaPredicted RBP8.99□□□□□ -0.97
CD46-204ENST00000357714 KRT32Q14532 448 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 CWF19L2Q2TBE0 894 aaKnown RBP8.99□□□□□ -0.97
CD46-204ENST00000357714 SYT10Q6XYQ8 523 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 TLR7Q9NYK1 1049 aaKnown RBP8.99□□□□□ -0.97
CD46-204ENST00000357714 CALCOCO1Q9P1Z2 691 aa8.99□□□□□ -0.97
CD46-204ENST00000357714 PPFIA3O75145 1194 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 EIF4A1P60842 406 aaKnown RBP8.98□□□□□ -0.97
CD46-204ENST00000357714 TEFQ10587 303 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 MTX1Q13505 466 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 SLFNL1Q499Z3 407 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 FSIP1Q8NA03 581 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 FMNL2Q96PY5 1086 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 KCNQ3O43525 872 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 SFPQP23246 707 aaKnown RBP eCLIP8.98□□□□□ -0.97
CD46-204ENST00000357714 TMC6Q7Z403 805 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 TSPOAP1O95153 1857 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 SASH1O94885 1247 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 HOXC9P31274 260 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 CERS3Q8IU89 383 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 DHX40Q8IX18 779 aaKnown RBP8.98□□□□□ -0.97
CD46-204ENST00000357714 EDC3Q96F86 508 aaKnown RBP8.98□□□□□ -0.97
CD46-204ENST00000357714 USP28Q96RU2 1077 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 GOLPH3LQ9H4A5 285 aa8.98□□□□□ -0.97
CD46-204ENST00000357714 RIMS1Q86UR5 1692 aaKnown RBP8.97□□□□□ -0.97
CD46-204ENST00000357714 XRN1Q8IZH2 1706 aaKnown RBP8.97□□□□□ -0.97
CD46-204ENST00000357714 PEAK1Q9H792 1746 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 ADGRL3Q9HAR2 1447 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 GUCY1B3Q02153 619 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 FAM160A1Q05DH4 1040 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 ARHGAP29Q52LW3 1261 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
CD46-204ENST00000357714 ZNF396Q96N95 335 aaPredicted RBP8.97□□□□□ -0.97
CD46-204ENST00000357714 ALDH8A1Q9H2A2 487 aaPredicted RBP8.97□□□□□ -0.97
CD46-204ENST00000357714 LGR6Q9HBX8 967 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 ZNF446Q9NWS9 450 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 DBF4Q9UBU7 674 aaPredicted RBP8.97□□□□□ -0.97
CD46-204ENST00000357714 AGLP35573 1532 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 SPATA31D1Q6ZQQ2 1576 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 TAF5LO75529 589 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 ALDH1L1O75891 902 aa8.97□□□□□ -0.97
CD46-204ENST00000357714 UBXN4Q92575 508 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms