RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 RIOK3O14730 519 aaKnown RBP17.56■□□□□ 0.4
USP6-202ENST00000357482 KIF1CO43896 1103 aaKnown RBP17.56■□□□□ 0.4
USP6-202ENST00000357482 DHX16O60231 1041 aaKnown RBP17.56■□□□□ 0.4
USP6-202ENST00000357482 CYP2C19P33261 490 aa17.56■□□□□ 0.4
USP6-202ENST00000357482 SATB1Q01826 763 aa17.56■□□□□ 0.4
USP6-202ENST00000357482 MUM1L1Q5H9M0 696 aa17.56■□□□□ 0.4
USP6-202ENST00000357482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.56■□□□□ 0.4
USP6-202ENST00000357482 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
USP6-202ENST00000357482 KIF18AQ8NI77 898 aa17.56■□□□□ 0.4
USP6-202ENST00000357482 LMBRD1Q9NUN5 540 aa17.56■□□□□ 0.4
USP6-202ENST00000357482 RSPH14Q9UHP6 348 aa17.56■□□□□ 0.4
USP6-202ENST00000357482 MMP10P09238 476 aa17.55■□□□□ 0.4
USP6-202ENST00000357482 PHACTR3Q96KR7 559 aa17.55■□□□□ 0.4
USP6-202ENST00000357482 TJP1Q07157 1748 aa17.55■□□□□ 0.4
USP6-202ENST00000357482 MNS1Q8NEH6 495 aa17.55■□□□□ 0.4
USP6-202ENST00000357482 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
USP6-202ENST00000357482 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
USP6-202ENST00000357482 K7ELQ4 463 aaPredicted RBP17.54■□□□□ 0.4
USP6-202ENST00000357482 MBD3O95983 291 aa17.54■□□□□ 0.4
USP6-202ENST00000357482 TICAM2Q86XR7 235 aa17.54■□□□□ 0.4
USP6-202ENST00000357482 EGFL6Q8IUX8 553 aa17.54■□□□□ 0.4
USP6-202ENST00000357482 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
USP6-202ENST00000357482 ADAMTS7Q9UKP4 1686 aa17.53■□□□□ 0.4
USP6-202ENST00000357482 RAD51AP2Q09MP3 1159 aa17.53■□□□□ 0.4
USP6-202ENST00000357482 GOLGA6L1Q8N7Z2 621 aa17.53■□□□□ 0.4
USP6-202ENST00000357482 IL17REQ8NFR9 667 aa17.53■□□□□ 0.4
USP6-202ENST00000357482 CCDC87Q9NVE4 849 aa17.53■□□□□ 0.4
USP6-202ENST00000357482 NCBP1Q09161 790 aaKnown RBP17.53■□□□□ 0.4
USP6-202ENST00000357482 SPINK5Q9NQ38 1064 aaPredicted RBP17.53■□□□□ 0.4
USP6-202ENST00000357482 FCHSD2O94868 740 aa17.52■□□□□ 0.4
USP6-202ENST00000357482 RTF1Q92541 710 aaKnown RBP17.52■□□□□ 0.4
USP6-202ENST00000357482 WWC3Q9ULE0 1092 aa17.52■□□□□ 0.4
USP6-202ENST00000357482 MYH14Q7Z406 1995 aaKnown RBP17.52■□□□□ 0.39
USP6-202ENST00000357482 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.39
USP6-202ENST00000357482 GYS1P13807 737 aa17.51■□□□□ 0.39
USP6-202ENST00000357482 CASQ1P31415 396 aa17.51■□□□□ 0.39
USP6-202ENST00000357482 HNRNPH2P55795 449 aaKnown RBP17.51■□□□□ 0.39
USP6-202ENST00000357482 CICQ96RK0 1608 aaPredicted RBP17.51■□□□□ 0.39
USP6-202ENST00000357482 INTS5Q6P9B9 1019 aaKnown RBP17.51■□□□□ 0.39
USP6-202ENST00000357482 PLEKHF1Q96S99 279 aa17.51■□□□□ 0.39
USP6-202ENST00000357482 SRP68Q9UHB9 627 aaKnown RBP17.51■□□□□ 0.39
USP6-202ENST00000357482 PARP3Q9Y6F1 533 aa17.51■□□□□ 0.39
USP6-202ENST00000357482 C4AP0C0L4 1744 aa17.5■□□□□ 0.39
USP6-202ENST00000357482 CYP19A1P11511 503 aaPredicted RBP17.5■□□□□ 0.39
USP6-202ENST00000357482 YBX3P16989 372 aaKnown RBP eCLIP17.5■□□□□ 0.39
USP6-202ENST00000357482 SYAP1Q96A49 352 aaPredicted RBP17.5■□□□□ 0.39
USP6-202ENST00000357482 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
USP6-202ENST00000357482 SMTNL1A8MU46 457 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 GRIN3BO60391 1043 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 ZNF790Q6PG37 636 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 TXLNBQ8N3L3 684 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 ZNF397Q8NF99 534 aaPredicted RBP17.49■□□□□ 0.39
USP6-202ENST00000357482 TSPY26PQ9H489 355 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 RBM28Q9NW13 759 aaKnown RBP17.49■□□□□ 0.39
USP6-202ENST00000357482 DONSONQ9NYP3 566 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 RAI14Q9P0K7 980 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 ZPR1O75312 459 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 CHMP4CQ96CF2 233 aa17.49■□□□□ 0.39
USP6-202ENST00000357482 CWC22Q9HCG8 908 aaKnown RBP17.49■□□□□ 0.39
USP6-202ENST00000357482 KIF16BQ96L93 1317 aa17.48■□□□□ 0.39
USP6-202ENST00000357482 USP42Q9H9J4 1324 aaKnown RBP17.48■□□□□ 0.39
USP6-202ENST00000357482 BTBD11A6QL63 1104 aa17.48■□□□□ 0.39
USP6-202ENST00000357482 STARD3NLO95772 234 aa17.48■□□□□ 0.39
USP6-202ENST00000357482 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
USP6-202ENST00000357482 MCTP1Q6DN14 999 aa17.48■□□□□ 0.39
USP6-202ENST00000357482 MCM10Q7L590 875 aa17.48■□□□□ 0.39
USP6-202ENST00000357482 ZNF496Q96IT1 587 aaPredicted RBP17.48■□□□□ 0.39
USP6-202ENST00000357482 CWC15Q9P013 229 aaKnown RBP17.48■□□□□ 0.39
USP6-202ENST00000357482 PAXBP1Q9Y5B6 917 aa17.48■□□□□ 0.39
USP6-202ENST00000357482 CHD4Q14839 1912 aa17.47■□□□□ 0.39
USP6-202ENST00000357482 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
USP6-202ENST00000357482 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
USP6-202ENST00000357482 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
USP6-202ENST00000357482 SLFNL1Q499Z3 407 aa17.47■□□□□ 0.39
USP6-202ENST00000357482 KIAA1524Q8TCG1 905 aa17.47■□□□□ 0.39
USP6-202ENST00000357482 UBR2Q8IWV8 1755 aa17.47■□□□□ 0.39
USP6-202ENST00000357482 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.46■□□□□ 0.39
USP6-202ENST00000357482 ERICH4A6NGS2 130 aa17.46■□□□□ 0.39
USP6-202ENST00000357482 CYP2E1P05181 493 aaPredicted RBP17.46■□□□□ 0.39
USP6-202ENST00000357482 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
USP6-202ENST00000357482 TEX35Q5T0J7 233 aa17.46■□□□□ 0.39
USP6-202ENST00000357482 FMNL2Q96PY5 1086 aa17.46■□□□□ 0.39
USP6-202ENST00000357482 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
USP6-202ENST00000357482 ZNF330Q9Y3S2 320 aaPredicted RBP17.46■□□□□ 0.39
USP6-202ENST00000357482 COL15A1P39059 1388 aa17.45■□□□□ 0.38
USP6-202ENST00000357482 HEG1Q9ULI3 1381 aa17.45■□□□□ 0.38
USP6-202ENST00000357482 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
USP6-202ENST00000357482 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
USP6-202ENST00000357482 RNF20Q5VTR2 975 aa17.45■□□□□ 0.38
USP6-202ENST00000357482 USPL1Q5W0Q7 1092 aa17.45■□□□□ 0.38
USP6-202ENST00000357482 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
USP6-202ENST00000357482 FAM177BA6PVY3 158 aa17.45■□□□□ 0.38
USP6-202ENST00000357482 CALRP27797 417 aaKnown RBP17.45■□□□□ 0.38
USP6-202ENST00000357482 ZNF784Q8NCA9 323 aaPredicted RBP17.45■□□□□ 0.38
USP6-202ENST00000357482 KIF1BPQ96EK5 621 aa17.45■□□□□ 0.38
USP6-202ENST00000357482 TEX13AQ9BXU3 409 aaPredicted RBP17.45■□□□□ 0.38
USP6-202ENST00000357482 CT47A1Q5JQC4 288 aaPredicted RBP17.44■□□□□ 0.38
USP6-202ENST00000357482 CCDC91Q7Z6B0 441 aa17.44■□□□□ 0.38
USP6-202ENST00000357482 RPAINQ86UA6 219 aa17.44■□□□□ 0.38
USP6-202ENST00000357482 ZBTB9Q96C00 473 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms