RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 LMO7Q8WWI1 1683 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
PTBP1-203ENST00000356948 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
PTBP1-203ENST00000356948 FUCA2Q9BTY2 467 aa18.17■□□□□ 0.5
PTBP1-203ENST00000356948 PHKG2P15735 406 aa18.17■□□□□ 0.5
PTBP1-203ENST00000356948 TIMM10P62072 90 aa18.17■□□□□ 0.5
PTBP1-203ENST00000356948 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
PTBP1-203ENST00000356948 CCDC85AQ96PX6 553 aaPredicted RBP18.17■□□□□ 0.5
PTBP1-203ENST00000356948 TAF5LO75529 589 aa18.17■□□□□ 0.5
PTBP1-203ENST00000356948 BLOC1S2Q6QNY1 142 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 RFX5P48382 616 aaPredicted RBP18.16■□□□□ 0.5
PTBP1-203ENST00000356948 CBX1P83916 185 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 HS1BP3Q53T59 392 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 KCNB2Q92953 911 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 CRYBG1Q9Y4K1 1723 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 A0A087WZG4 1122 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 DDX58O95786 925 aaKnown RBP18.16■□□□□ 0.5
PTBP1-203ENST00000356948 ERC1Q8IUD2 1116 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 MEGF6O75095 1541 aa18.16■□□□□ 0.5
PTBP1-203ENST00000356948 LUZP1Q86V48 1076 aa18.15■□□□□ 0.5
PTBP1-203ENST00000356948 METTL22Q9BUU2 404 aaPredicted RBP18.15■□□□□ 0.5
PTBP1-203ENST00000356948 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
PTBP1-203ENST00000356948 UTYO14607 1347 aa18.15■□□□□ 0.5
PTBP1-203ENST00000356948 RPS6KB1P23443 525 aa18.15■□□□□ 0.5
PTBP1-203ENST00000356948 TNNI3KQ59H18 835 aa18.15■□□□□ 0.5
PTBP1-203ENST00000356948 FPGT-TNNI3KV9GXZ4 949 aa18.15■□□□□ 0.5
PTBP1-203ENST00000356948 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.49
PTBP1-203ENST00000356948 STOX1Q6ZVD7 989 aa18.14■□□□□ 0.49
PTBP1-203ENST00000356948 C5P01031 1676 aa18.14■□□□□ 0.49
PTBP1-203ENST00000356948 CYP21A2P08686 494 aa18.14■□□□□ 0.49
PTBP1-203ENST00000356948 NEXNQ0ZGT2 675 aa18.14■□□□□ 0.49
PTBP1-203ENST00000356948 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.49
PTBP1-203ENST00000356948 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.49
PTBP1-203ENST00000356948 ERCC4Q92889 916 aaPredicted RBP18.14■□□□□ 0.49
PTBP1-203ENST00000356948 USP54Q70EL1 1684 aa18.13■□□□□ 0.49
PTBP1-203ENST00000356948 ZNF609O15014 1411 aa18.13■□□□□ 0.49
PTBP1-203ENST00000356948 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
PTBP1-203ENST00000356948 TM6SF1Q9BZW5 370 aa18.13■□□□□ 0.49
PTBP1-203ENST00000356948 DACT1Q9NYF0 836 aa18.13■□□□□ 0.49
PTBP1-203ENST00000356948 MED23Q9ULK4 1368 aa18.13■□□□□ 0.49
PTBP1-203ENST00000356948 EPB41L2O43491 1005 aaKnown RBP18.12■□□□□ 0.49
PTBP1-203ENST00000356948 KDM4AO75164 1064 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 Q6ZUG5 572 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 KCNF1Q9H3M0 494 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 PYCARDQ9ULZ3 195 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 NBPF26B4DH59 902 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 NBPF14Q5TI25 921 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 NBPF10Q6P3W6 841 aaKnown RBP18.12■□□□□ 0.49
PTBP1-203ENST00000356948 NBPF15Q8N660 670 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 GPHNQ9NQX3 736 aaPredicted RBP18.12■□□□□ 0.49
PTBP1-203ENST00000356948 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
PTBP1-203ENST00000356948 PHF14O94880 888 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 A1BGP04217 495 aa18.12■□□□□ 0.49
PTBP1-203ENST00000356948 NCOA5Q9HCD5 579 aaKnown RBP18.12■□□□□ 0.49
PTBP1-203ENST00000356948 GUCY1B3Q02153 619 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 NR1I2O75469 434 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 CCT2P78371 535 aaKnown RBP18.11■□□□□ 0.49
PTBP1-203ENST00000356948 LRRC24Q50LG9 513 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 RAB11FIP4Q86YS3 637 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 BRF1Q92994 677 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 PGBD1Q96JS3 809 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 NAP1L2Q9ULW6 460 aaPredicted RBP18.11■□□□□ 0.49
PTBP1-203ENST00000356948 GOLIM4O00461 696 aa18.11■□□□□ 0.49
PTBP1-203ENST00000356948 SH2B1Q9NRF2 756 aaPredicted RBP18.11■□□□□ 0.49
PTBP1-203ENST00000356948 PUS3Q9BZE2 481 aaKnown RBP18.1■□□□□ 0.49
PTBP1-203ENST00000356948 NRBP1Q9UHY1 535 aa18.1■□□□□ 0.49
PTBP1-203ENST00000356948 HSP90B1P14625 803 aaKnown RBP18.1■□□□□ 0.49
PTBP1-203ENST00000356948 TTLL5Q6EMB2 1281 aa18.1■□□□□ 0.49
PTBP1-203ENST00000356948 TTC5Q8N0Z6 440 aa18.1■□□□□ 0.49
PTBP1-203ENST00000356948 TATP17735 454 aaPredicted RBP18.1■□□□□ 0.49
PTBP1-203ENST00000356948 CDK11BP21127 795 aaKnown RBP18.1■□□□□ 0.49
PTBP1-203ENST00000356948 FBXW7Q969H0 707 aa18.1■□□□□ 0.49
PTBP1-203ENST00000356948 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
PTBP1-203ENST00000356948 SNRKQ9NRH2 765 aa18.1■□□□□ 0.49
PTBP1-203ENST00000356948 KIAA2012Q0VF49 1180 aa18.09■□□□□ 0.49
PTBP1-203ENST00000356948 BBXQ8WY36 941 aaPredicted RBP18.09■□□□□ 0.49
PTBP1-203ENST00000356948 SCRN1Q12765 414 aa18.09■□□□□ 0.49
PTBP1-203ENST00000356948 MRVI1Q9Y6F6 885 aa18.09■□□□□ 0.49
PTBP1-203ENST00000356948 APOBRQ0VD83 1088 aa18.08■□□□□ 0.49
PTBP1-203ENST00000356948 NOLC1Q14978 699 aaKnown RBP eCLIP18.08■□□□□ 0.492e-6■■□□□ 11.7
PTBP1-203ENST00000356948 NEK1Q96PY6 1258 aa18.08■□□□□ 0.48
PTBP1-203ENST00000356948 SNRPA1P09661 255 aaKnown RBP18.07■□□□□ 0.48
PTBP1-203ENST00000356948 KRT85P78386 507 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 LRMPQ12912 555 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 SPATA32Q96LK8 384 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 COPRSQ9NQ92 184 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 ATP6V1DQ9Y5K8 247 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 SYNE4Q8N205 404 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 LEO1Q8WVC0 666 aaPredicted RBP18.07■□□□□ 0.48
PTBP1-203ENST00000356948 GJB4Q9NTQ9 266 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 CASP7P55210 303 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 CABP4P57796 275 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 IFNL2Q8IZJ0 200 aa18.07■□□□□ 0.48
PTBP1-203ENST00000356948 SPDYE4A6NLX3 237 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 ATP5JP18859 108 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 PSMA5P28066 241 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 ANO6Q4KMQ2 910 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 OTUD7BQ6GQQ9 843 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms