RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 RBM43Q6ZSC3 357 aaKnown RBP20.81■□□□□ 0.92
KDM1A-201ENST00000356634 CCDC66A2RUB6 948 aa20.8■□□□□ 0.92
KDM1A-201ENST00000356634 CCAR1Q8IX12 1150 aaKnown RBP20.8■□□□□ 0.92
KDM1A-201ENST00000356634 SBNO1A3KN83 1393 aa20.8■□□□□ 0.92
KDM1A-201ENST00000356634 STX1AQ16623 288 aa20.8■□□□□ 0.92
KDM1A-201ENST00000356634 IQCB1Q15051 598 aa20.8■□□□□ 0.92
KDM1A-201ENST00000356634 CCDC73Q6ZRK6 1079 aa20.8■□□□□ 0.92
KDM1A-201ENST00000356634 CFAP45Q9UL16 551 aa20.8■□□□□ 0.92
KDM1A-201ENST00000356634 SLU7O95391 586 aaKnown RBP20.79■□□□□ 0.92
KDM1A-201ENST00000356634 CWF19L2Q2TBE0 894 aaKnown RBP20.79■□□□□ 0.92
KDM1A-201ENST00000356634 GORABQ5T7V8 394 aa20.79■□□□□ 0.92
KDM1A-201ENST00000356634 KCNB2Q92953 911 aa20.79■□□□□ 0.92
KDM1A-201ENST00000356634 ERO1AQ96HE7 468 aa20.79■□□□□ 0.92
KDM1A-201ENST00000356634 TLR7Q9NYK1 1049 aaKnown RBP20.79■□□□□ 0.92
KDM1A-201ENST00000356634 TMEM2Q9UHN6 1383 aa20.79■□□□□ 0.92
KDM1A-201ENST00000356634 KCNQ3O43525 872 aa20.79■□□□□ 0.92
KDM1A-201ENST00000356634 NEMFO60524 1076 aa20.79■□□□□ 0.92
KDM1A-201ENST00000356634 KINO60870 393 aaKnown RBP20.79■□□□□ 0.92
KDM1A-201ENST00000356634 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
KDM1A-201ENST00000356634 G3BP1Q13283 466 aaKnown RBP eCLIP20.79■□□□□ 0.924e-6■■□□□ 12.5
KDM1A-201ENST00000356634 EDC3Q96F86 508 aaKnown RBP20.79■□□□□ 0.92
KDM1A-201ENST00000356634 KDRP35968 1356 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 VGLL3A8MV65 326 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 ZNF589Q86UQ0 364 aaPredicted RBP20.78■□□□□ 0.92
KDM1A-201ENST00000356634 AOPEPQ8N6M6 819 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 TRERF1Q96PN7 1200 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 USP42Q9H9J4 1324 aaKnown RBP20.78■□□□□ 0.92
KDM1A-201ENST00000356634 FAM208AQ9UK61 1670 aaKnown RBP20.78■□□□□ 0.92
KDM1A-201ENST00000356634 HIP1O00291 1037 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 CDC25BP30305 580 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 CCAR2Q8N163 923 aaKnown RBP20.78■□□□□ 0.92
KDM1A-201ENST00000356634 GTF3C6Q969F1 213 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 EAF2Q96CJ1 260 aaPredicted RBP20.78■□□□□ 0.92
KDM1A-201ENST00000356634 MRFAP1L1Q96HT8 127 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 DIP2BQ9P265 1576 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.78■□□□□ 0.92
KDM1A-201ENST00000356634 GTF2E1P29083 439 aaPredicted RBP20.78■□□□□ 0.92
KDM1A-201ENST00000356634 NYAP1Q6ZVC0 841 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 ERC1Q8IUD2 1116 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
KDM1A-201ENST00000356634 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
KDM1A-201ENST00000356634 CAVIN2O95810 425 aa20.77■□□□□ 0.92
KDM1A-201ENST00000356634 RBM6P78332 1123 aaKnown RBP20.77■□□□□ 0.92
KDM1A-201ENST00000356634 ERCC6LQ2NKX8 1250 aa20.77■□□□□ 0.92
KDM1A-201ENST00000356634 ABTB2Q8N961 1025 aa20.77■□□□□ 0.92
KDM1A-201ENST00000356634 MAP3K2Q9Y2U5 619 aa20.77■□□□□ 0.92
KDM1A-201ENST00000356634 PXDNLA1KZ92 1463 aa20.77■□□□□ 0.92
KDM1A-201ENST00000356634 KCNA6P17658 529 aa20.77■□□□□ 0.91
KDM1A-201ENST00000356634 RESTQ13127 1097 aa20.77■□□□□ 0.91
KDM1A-201ENST00000356634 AKAP12Q02952 1782 aa20.77■□□□□ 0.91
KDM1A-201ENST00000356634 ME1P48163 572 aa20.76■□□□□ 0.91
KDM1A-201ENST00000356634 CCZ1BP86790 482 aa20.76■□□□□ 0.91
KDM1A-201ENST00000356634 CCZ1P86791 482 aaPredicted RBP20.76■□□□□ 0.91
KDM1A-201ENST00000356634 GUCY1B3Q02153 619 aa20.76■□□□□ 0.91
KDM1A-201ENST00000356634 SNW1Q13573 536 aaKnown RBP20.76■□□□□ 0.91
KDM1A-201ENST00000356634 ZRSR1Q15695 479 aaKnown RBP20.76■□□□□ 0.91
KDM1A-201ENST00000356634 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
KDM1A-201ENST00000356634 SMC2O95347 1197 aa20.76■□□□□ 0.91
KDM1A-201ENST00000356634 Q6ZUG5 572 aa20.76■□□□□ 0.91
KDM1A-201ENST00000356634 KLHDC4Q8TBB5 520 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 LGR6Q9HBX8 967 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 NDUFB9Q9Y6M9 179 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 SETD1BQ9UPS6 1966 aaKnown RBP20.75■□□□□ 0.91
KDM1A-201ENST00000356634 SYT10Q6XYQ8 523 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 TMEM51Q9NW97 253 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 CCDC9Q9Y3X0 531 aaKnown RBP20.75■□□□□ 0.91
KDM1A-201ENST00000356634 SARM1Q6SZW1 724 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 CEP57L1Q8IYX8 460 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 SDF4Q9BRK5 362 aa20.75■□□□□ 0.91
KDM1A-201ENST00000356634 HOMER1Q86YM7 354 aa20.74■□□□□ 0.91
KDM1A-201ENST00000356634 GOLPH3LQ9H4A5 285 aa20.74■□□□□ 0.91
KDM1A-201ENST00000356634 ANO10Q9NW15 660 aa20.74■□□□□ 0.91
KDM1A-201ENST00000356634 RGPD1P0DJD0 1748 aa20.74■□□□□ 0.91
KDM1A-201ENST00000356634 EIF4A1P60842 406 aaKnown RBP20.74■□□□□ 0.91
KDM1A-201ENST00000356634 AIMP1Q12904 312 aaKnown RBP20.74■□□□□ 0.91
KDM1A-201ENST00000356634 TIGD1Q96MW7 591 aa20.74■□□□□ 0.91
KDM1A-201ENST00000356634 NEK1Q96PY6 1258 aa20.74■□□□□ 0.91
KDM1A-201ENST00000356634 TEFQ10587 303 aa20.73■□□□□ 0.91
KDM1A-201ENST00000356634 FSIP1Q8NA03 581 aa20.73■□□□□ 0.91
KDM1A-201ENST00000356634 NOL10Q9BSC4 688 aaKnown RBP20.73■□□□□ 0.91
KDM1A-201ENST00000356634 SASH1O94885 1247 aa20.73■□□□□ 0.91
KDM1A-201ENST00000356634 SPATA31D1Q6ZQQ2 1576 aa20.72■□□□□ 0.91
KDM1A-201ENST00000356634 HOXC9P31274 260 aa20.72■□□□□ 0.91
KDM1A-201ENST00000356634 CCDC129Q6ZRS4 1044 aa20.72■□□□□ 0.91
KDM1A-201ENST00000356634 DHX40Q8IX18 779 aaKnown RBP20.72■□□□□ 0.91
KDM1A-201ENST00000356634 LRRN4CLQ8ND94 238 aa20.72■□□□□ 0.91
KDM1A-201ENST00000356634 ZSCAN16Q9H4T2 348 aaPredicted RBP20.72■□□□□ 0.91
KDM1A-201ENST00000356634 CTAGE5O15320 804 aa20.72■□□□□ 0.91
KDM1A-201ENST00000356634 TMC6Q7Z403 805 aa20.72■□□□□ 0.91
KDM1A-201ENST00000356634 ZNF446Q9NWS9 450 aa20.72■□□□□ 0.91
KDM1A-201ENST00000356634 SETD1AO15047 1707 aaKnown RBP20.72■□□□□ 0.91
KDM1A-201ENST00000356634 CCT2P78371 535 aaKnown RBP20.72■□□□□ 0.91
KDM1A-201ENST00000356634 CHGBP05060 677 aa20.71■□□□□ 0.91
KDM1A-201ENST00000356634 USP28Q96RU2 1077 aa20.71■□□□□ 0.91
KDM1A-201ENST00000356634 TAOK2Q9UL54 1235 aa20.71■□□□□ 0.91
KDM1A-201ENST00000356634 PTPRUQ92729 1446 aa20.71■□□□□ 0.91
KDM1A-201ENST00000356634 HMG20BQ9P0W2 317 aa20.71■□□□□ 0.91
KDM1A-201ENST00000356634 ADCY9O60503 1353 aa20.71■□□□□ 0.91
KDM1A-201ENST00000356634 BTBD11A6QL63 1104 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms