RNA–Protein interactions for RNA: ENST00000356100.6

PTPRT-201, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,480 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-201ENST00000356100 ATP2A1O14983 1001 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 POLR3AO14802 1390 aaPredicted RBP6.89□□□□□ -1.31
PTPRT-201ENST00000356100 MTIF2P46199 727 aaKnown RBP6.89□□□□□ -1.31
PTPRT-201ENST00000356100 DRC1Q96MC2 740 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 PLCH2O75038 1416 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 ZNF804AQ7Z570 1209 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 GLT8D2Q9H1C3 349 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 NPHP3Q7Z494 1330 aa6.89□□□□□ -1.31
PTPRT-201ENST00000356100 A2MP01023 1474 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 PRAG1Q86YV5 1406 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 TCOF1Q13428 1488 aaKnown RBP6.88□□□□□ -1.31
PTPRT-201ENST00000356100 MAP4K4O95819 1239 aaPredicted RBP6.88□□□□□ -1.31
PTPRT-201ENST00000356100 MINDY4BA8MYZ0 360 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 EXOC5O00471 708 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 PPP1R2P41236 205 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 RBM25P49756 843 aaKnown RBP6.88□□□□□ -1.31
PTPRT-201ENST00000356100 CAMK4Q16566 473 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 WDR62O43379 1518 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 DYNC1I1O14576 645 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 IVLP07476 585 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
PTPRT-201ENST00000356100 MYD88Q99836 296 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 FSIP1Q8NA03 581 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 GIMAP7Q8NHV1 300 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 JAKMIP2Q96AA8 810 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 CCDC77Q9BR77 488 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.88□□□□□ -1.31
PTPRT-201ENST00000356100 TMEM67Q5HYA8 995 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 BICDL1Q6ZP65 573 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 NYXQ9GZU5 481 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 HS1BP3Q53T59 392 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 CTR9Q6PD62 1173 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 BOLA2Q9H3K6 86 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 KIAA1524Q8TCG1 905 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 NEK1Q96PY6 1258 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 IMPG2Q9BZV3 1241 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 TSGA10Q9BZW7 698 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 HDAC9Q9UKV0 1011 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 SSX2IPQ9Y2D8 614 aa6.88□□□□□ -1.31
PTPRT-201ENST00000356100 CLUL1Q15846 466 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 TDRD12Q587J7 1177 aaKnown RBP6.87□□□□□ -1.31
PTPRT-201ENST00000356100 INSRP06213 1382 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 PSMA7O14818 248 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 KLHL10Q6JEL2 608 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 BABAM1Q9NWV8 329 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 BRPF3Q9ULD4 1205 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 CYLC1P35663 651 aaPredicted RBP6.87□□□□□ -1.31
PTPRT-201ENST00000356100 UTP14AQ9BVJ6 771 aaKnown RBP6.87□□□□□ -1.31
PTPRT-201ENST00000356100 IL15P40933 162 aaPredicted RBP6.87□□□□□ -1.31
PTPRT-201ENST00000356100 SELENOOQ9BVL4 669 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 UBA5Q9GZZ9 404 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 SKIDA1Q1XH10 827 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 HOMER2Q9NSB8 354 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 KDM4AO75164 1064 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 WTAPQ15007 396 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 FAM200AQ8TCP9 573 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 CTNNBL1Q8WYA6 563 aaPredicted RBP6.87□□□□□ -1.31
PTPRT-201ENST00000356100 USP25Q9UHP3 1055 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 PARD3Q8TEW0 1356 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 AOX1Q06278 1338 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 ZNF165P49910 485 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 NBPF6Q5VWK0 638 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 NBPF5PQ86XG9 351 aaPredicted RBP6.87□□□□□ -1.31
PTPRT-201ENST00000356100 SYCP3Q8IZU3 236 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 TNPO1Q92973 898 aaKnown RBP6.87□□□□□ -1.31
PTPRT-201ENST00000356100 NBPF4Q96M43 638 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 TBC1D32Q96NH3 1257 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 TSPY2A6NKD2 308 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 MAP3K2Q9Y2U5 619 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 MBIPQ9NS73 344 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 TSPY3P0CV98 308 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 TSPY8P0CW00 308 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 GNA11P29992 359 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 PIP4K2BP78356 416 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 KIAA0753Q2KHM9 967 aa6.87□□□□□ -1.31
PTPRT-201ENST00000356100 CCDC14Q49A88 953 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 IQCGQ9H095 443 aaKnown RBP6.86□□□□□ -1.31
PTPRT-201ENST00000356100 NCBP1Q09161 790 aaKnown RBP6.86□□□□□ -1.31
PTPRT-201ENST00000356100 BRAPQ7Z569 592 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 CDCA7Q9BWT1 371 aaPredicted RBP6.86□□□□□ -1.31
PTPRT-201ENST00000356100 AMOTL2Q9Y2J4 779 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 TRAPPC8Q9Y2L5 1435 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 A6NNZ2 444 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 KRT13P13646 458 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 SYKP43405 635 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 SNW1Q13573 536 aaKnown RBP6.86□□□□□ -1.31
PTPRT-201ENST00000356100 TUBB8Q3ZCM7 444 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 CCDC155Q8N6L0 562 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 ABCA5Q8WWZ7 1642 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 NDC80O14777 642 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 NUCB1Q02818 461 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 SHROOM2Q13796 1616 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 ATP2A2P16615 1042 aaKnown RBP6.86□□□□□ -1.31
PTPRT-201ENST00000356100 GJB2P29033 226 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 KRT83P78385 493 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 TBC1D9Q6ZT07 1266 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 UBE3BQ7Z3V4 1068 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 IQCDQ96DY2 449 aa6.86□□□□□ -1.31
PTPRT-201ENST00000356100 SYNCQ9H7C4 482 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms