RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 RARSP54136 660 aaKnown RBP13□□□□□ -0.33
FN1-204ENST00000356005 TMOD4Q9NZQ9 345 aa13□□□□□ -0.33
FN1-204ENST00000356005 YEATS2Q9ULM3 1422 aa13□□□□□ -0.33
FN1-204ENST00000356005 SPA17Q15506 151 aa13□□□□□ -0.33
FN1-204ENST00000356005 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
FN1-204ENST00000356005 SPDYE3A6NKU9 549 aa13□□□□□ -0.33
FN1-204ENST00000356005 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
FN1-204ENST00000356005 PATL2C9JE40 543 aaKnown RBP12.99□□□□□ -0.33
FN1-204ENST00000356005 WTAPQ15007 396 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 CHPF2Q9P2E5 772 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 TRAPPC8Q9Y2L5 1435 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 DPY19L2Q6NUT2 758 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 KSR2Q6VAB6 950 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 TNPO1Q92973 898 aaKnown RBP12.99□□□□□ -0.33
FN1-204ENST00000356005 BICD1Q96G01 975 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 KDM5CP41229 1560 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 NFATC2IPQ8NCF5 419 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
FN1-204ENST00000356005 PIK3C2GO75747 1445 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 CCDC191Q8NCU4 936 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 F6X3S4 739 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 IARSP41252 1262 aaKnown RBP12.99□□□□□ -0.33
FN1-204ENST00000356005 METAP2P50579 478 aaKnown RBP eCLIP12.99□□□□□ -0.33
FN1-204ENST00000356005 COPS6Q7L5N1 327 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 C6orf50Q9HD87 102 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 SLAIN2Q9P270 581 aa12.99□□□□□ -0.33
FN1-204ENST00000356005 ZCCHC11Q5TAX3 1644 aaKnown RBP12.99□□□□□ -0.33
FN1-204ENST00000356005 TRAK2O60296 914 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 VAT1LQ9HCJ6 419 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 MAGEB6P1A0A0J9YX57 407 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 UBA7P41226 1012 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 HECW2Q9P2P5 1572 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 ARHGEF12Q9NZN5 1544 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 CALM1P0DP23 149 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 CALM2P0DP24 149 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 CALM3P0DP25 149 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 GJA3Q9Y6H8 435 aa12.98□□□□□ -0.33
FN1-204ENST00000356005 STX6O43752 255 aa12.97□□□□□ -0.33
FN1-204ENST00000356005 ARHGEF6Q15052 776 aa12.97□□□□□ -0.33
FN1-204ENST00000356005 TBCAO75347 108 aaKnown RBP12.97□□□□□ -0.33
FN1-204ENST00000356005 PRPF40BQ6NWY9 871 aaKnown RBP12.97□□□□□ -0.33
FN1-204ENST00000356005 GIGYF2Q6Y7W6 1299 aaKnown RBP12.97□□□□□ -0.33
FN1-204ENST00000356005 ARHGEF10LQ9HCE6 1279 aa12.97□□□□□ -0.33
FN1-204ENST00000356005 PABPN1LA6NDY0 278 aaKnown RBP12.97□□□□□ -0.33
FN1-204ENST00000356005 F8W031 263 aaPredicted RBP12.97□□□□□ -0.33
FN1-204ENST00000356005 MAP3K11Q16584 847 aa12.97□□□□□ -0.33
FN1-204ENST00000356005 CABLES1Q8TDN4 633 aa12.97□□□□□ -0.33
FN1-204ENST00000356005 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
FN1-204ENST00000356005 CALML3P27482 149 aa12.97□□□□□ -0.33
FN1-204ENST00000356005 ENOX2Q16206 610 aaKnown RBP12.97□□□□□ -0.33
FN1-204ENST00000356005 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.33
FN1-204ENST00000356005 CCDC91Q7Z6B0 441 aa12.96□□□□□ -0.33
FN1-204ENST00000356005 ARHGAP45Q92619 1136 aa12.96□□□□□ -0.33
FN1-204ENST00000356005 COL17A1Q9UMD9 1497 aaPredicted RBP12.96□□□□□ -0.33
FN1-204ENST00000356005 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.33
FN1-204ENST00000356005 BABAM1Q9NWV8 329 aa12.96□□□□□ -0.33
FN1-204ENST00000356005 KDM6BO15054 1643 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 RTL9Q8NET4 1388 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 ANO10Q9NW15 660 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 DENND2AQ9ULE3 1009 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 IRS4O14654 1257 aaPredicted RBP12.96□□□□□ -0.34
FN1-204ENST00000356005 APBA3O96018 575 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 CCDC112Q8NEF3 446 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 SLC4A4Q9Y6R1 1079 aa12.96□□□□□ -0.34
FN1-204ENST00000356005 H7C1D1 291 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 PICALMQ13492 652 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
FN1-204ENST00000356005 TTC12Q9H892 705 aaPredicted RBP12.95□□□□□ -0.34
FN1-204ENST00000356005 MBIPQ9NS73 344 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 HOMER2Q9NSB8 354 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 GPR162Q16538 588 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 HOOK3Q86VS8 718 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 CNNM3Q8NE01 707 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
FN1-204ENST00000356005 TTC6Q86TZ1 520 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 SMARCC2Q8TAQ2 1214 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 RMND1Q9NWS8 449 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 SLC5A4Q9NY91 659 aa12.95□□□□□ -0.34
FN1-204ENST00000356005 CTNNA2P26232 953 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 CWC15Q9P013 229 aaKnown RBP12.94□□□□□ -0.34
FN1-204ENST00000356005 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
FN1-204ENST00000356005 ERLIN1O75477 346 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
FN1-204ENST00000356005 TBC1D5Q92609 795 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 RRP36Q96EU6 259 aaKnown RBP12.94□□□□□ -0.34
FN1-204ENST00000356005 IMPG2Q9BZV3 1241 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 CFAP100Q494V2 611 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 RNF214Q8ND24 703 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 CCDC82Q8N4S0 544 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 GGA1Q9UJY5 639 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 WDR66Q8TBY9 1149 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms