RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 EPHA10Q5JZY3 1008 aa21.49■■□□□ 1.03
PDZD3-202ENST00000355547 ORAI2Q96SN7 254 aa21.49■■□□□ 1.03
PDZD3-202ENST00000355547 METTL22Q9BUU2 404 aaPredicted RBP21.49■■□□□ 1.03
PDZD3-202ENST00000355547 SCAND2PQ9GZW5 306 aaPredicted RBP21.49■■□□□ 1.03
PDZD3-202ENST00000355547 ATP5JP18859 108 aa21.48■■□□□ 1.03
PDZD3-202ENST00000355547 C19orf44Q9H6X5 657 aa21.48■■□□□ 1.03
PDZD3-202ENST00000355547 FERMT3Q86UX7 667 aa21.48■■□□□ 1.03
PDZD3-202ENST00000355547 KLHDC4Q8TBB5 520 aa21.48■■□□□ 1.03
PDZD3-202ENST00000355547 LIG1P18858 919 aa21.47■■□□□ 1.03
PDZD3-202ENST00000355547 HMGN5P82970 282 aaKnown RBP21.47■■□□□ 1.03
PDZD3-202ENST00000355547 KRT32Q14532 448 aa21.47■■□□□ 1.03
PDZD3-202ENST00000355547 MAP3K11Q16584 847 aa21.47■■□□□ 1.03
PDZD3-202ENST00000355547 FAM200AQ8TCP9 573 aa21.47■■□□□ 1.03
PDZD3-202ENST00000355547 NUP62CLQ9H1M0 184 aa21.47■■□□□ 1.03
PDZD3-202ENST00000355547 XAGE3Q8WTP9 111 aa21.46■■□□□ 1.03
PDZD3-202ENST00000355547 TCEANC2Q96MN5 208 aa21.46■■□□□ 1.03
PDZD3-202ENST00000355547 SLC52A2Q9HAB3 445 aa21.46■■□□□ 1.03
PDZD3-202ENST00000355547 LTBP4Q8N2S1 1624 aa21.46■■□□□ 1.03
PDZD3-202ENST00000355547 GTF2F1P35269 517 aaKnown RBP eCLIP21.46■■□□□ 1.03
PDZD3-202ENST00000355547 RFX5P48382 616 aaPredicted RBP21.46■■□□□ 1.03
PDZD3-202ENST00000355547 DNTTIP2Q5QJE6 756 aaKnown RBP21.46■■□□□ 1.03
PDZD3-202ENST00000355547 FAM173BQ6P4H8 233 aa21.46■■□□□ 1.03
PDZD3-202ENST00000355547 RFX7Q2KHR2 1363 aa21.46■■□□□ 1.03
PDZD3-202ENST00000355547 RBM43Q6ZSC3 357 aaKnown RBP21.45■■□□□ 1.02
PDZD3-202ENST00000355547 KIAA1524Q8TCG1 905 aa21.45■■□□□ 1.02
PDZD3-202ENST00000355547 MRVI1Q9Y6F6 885 aa21.45■■□□□ 1.02
PDZD3-202ENST00000355547 NPHP3Q7Z494 1330 aa21.45■■□□□ 1.02
PDZD3-202ENST00000355547 COL15A1P39059 1388 aa21.45■■□□□ 1.02
PDZD3-202ENST00000355547 SLC39A6Q13433 755 aa21.45■■□□□ 1.02
PDZD3-202ENST00000355547 COPS6Q7L5N1 327 aa21.45■■□□□ 1.02
PDZD3-202ENST00000355547 LRP10Q7Z4F1 713 aa21.45■■□□□ 1.02
PDZD3-202ENST00000355547 TYRO3Q06418 890 aa21.44■■□□□ 1.02
PDZD3-202ENST00000355547 LEO1Q8WVC0 666 aaPredicted RBP21.44■■□□□ 1.02
PDZD3-202ENST00000355547 MYD88Q99836 296 aa21.44■■□□□ 1.02
PDZD3-202ENST00000355547 KCNF1Q9H3M0 494 aa21.44■■□□□ 1.02
PDZD3-202ENST00000355547 DBNLQ9UJU6 430 aaKnown RBP21.44■■□□□ 1.02
PDZD3-202ENST00000355547 ERBB3P21860 1342 aa21.44■■□□□ 1.02
PDZD3-202ENST00000355547 KDM6AO15550 1401 aaPredicted RBP21.44■■□□□ 1.02
PDZD3-202ENST00000355547 C17orf53Q8N3J3 647 aaPredicted RBP21.44■■□□□ 1.02
PDZD3-202ENST00000355547 DDX19AQ9NUU7 478 aaKnown RBP21.44■■□□□ 1.02
PDZD3-202ENST00000355547 C5P01031 1676 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 MST1RQ04912 1400 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 PLCB2Q00722 1185 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 PTPN12Q05209 780 aaKnown RBP21.43■■□□□ 1.02
PDZD3-202ENST00000355547 RABL6Q3YEC7 729 aaPredicted RBP21.43■■□□□ 1.02
PDZD3-202ENST00000355547 TNNI3KQ59H18 835 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 EDC3Q96F86 508 aaKnown RBP21.43■■□□□ 1.02
PDZD3-202ENST00000355547 SPATA32Q96LK8 384 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 FPGT-TNNI3KV9GXZ4 949 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 TRPM3Q9HCF6 1732 aaPredicted RBP21.43■■□□□ 1.02
PDZD3-202ENST00000355547 MYL6BP14649 208 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 ANKRD13DQ6ZTN6 518 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 GTF3C6Q969F1 213 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 DACT1Q9NYF0 836 aa21.43■■□□□ 1.02
PDZD3-202ENST00000355547 GOLGA6L6A8MZA4 724 aa21.42■■□□□ 1.02
PDZD3-202ENST00000355547 ATF3P18847 181 aa21.42■■□□□ 1.02
PDZD3-202ENST00000355547 NEK1Q96PY6 1258 aa21.41■■□□□ 1.02
PDZD3-202ENST00000355547 TNMDQ9H2S6 317 aa21.41■■□□□ 1.02
PDZD3-202ENST00000355547 CLSTN2Q9H4D0 955 aa21.41■■□□□ 1.02
PDZD3-202ENST00000355547 TFIP11Q9UBB9 837 aaKnown RBP21.41■■□□□ 1.02
PDZD3-202ENST00000355547 U3KPZ7 1027 aaPredicted RBP21.41■■□□□ 1.02
PDZD3-202ENST00000355547 TFCP2Q12800 502 aa21.41■■□□□ 1.02
PDZD3-202ENST00000355547 CAMK4Q16566 473 aa21.41■■□□□ 1.02
PDZD3-202ENST00000355547 LMOD2Q6P5Q4 547 aa21.41■■□□□ 1.02
PDZD3-202ENST00000355547 SCN11AQ9UI33 1791 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 PHKG2P15735 406 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 KRT28Q7Z3Y7 464 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 NFATC2IPQ8NCF5 419 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 ZNF496Q96IT1 587 aaPredicted RBP21.4■■□□□ 1.02
PDZD3-202ENST00000355547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.4■■□□□ 1.02
PDZD3-202ENST00000355547 GOLGA6L4A6NEF3 574 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 RESTQ13127 1097 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 STK3Q13188 491 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 RAPGEF4Q8WZA2 1011 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 PYCARDQ9ULZ3 195 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 CHMP3Q9Y3E7 222 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 ZNF609O15014 1411 aa21.4■■□□□ 1.02
PDZD3-202ENST00000355547 HAUS7Q99871 368 aa21.39■■□□□ 1.02
PDZD3-202ENST00000355547 PGBD1Q96JS3 809 aa21.39■■□□□ 1.01
PDZD3-202ENST00000355547 JAK2O60674 1132 aa21.38■■□□□ 1.01
PDZD3-202ENST00000355547 SNRPA1P09661 255 aaKnown RBP21.38■■□□□ 1.01
PDZD3-202ENST00000355547 MCMDC2Q4G0Z9 681 aa21.38■■□□□ 1.01
PDZD3-202ENST00000355547 LUZP1Q86V48 1076 aa21.38■■□□□ 1.01
PDZD3-202ENST00000355547 CBX8Q9HC52 389 aa21.38■■□□□ 1.01
PDZD3-202ENST00000355547 CKAP2LQ8IYA6 745 aa21.38■■□□□ 1.01
PDZD3-202ENST00000355547 USP16Q9Y5T5 823 aa21.38■■□□□ 1.01
PDZD3-202ENST00000355547 CYP21A2P08686 494 aa21.37■■□□□ 1.01
PDZD3-202ENST00000355547 ANO6Q4KMQ2 910 aa21.37■■□□□ 1.01
PDZD3-202ENST00000355547 Q6ZUG5 572 aa21.37■■□□□ 1.01
PDZD3-202ENST00000355547 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
PDZD3-202ENST00000355547 SMAP1Q8IYB5 467 aaPredicted RBP21.37■■□□□ 1.01
PDZD3-202ENST00000355547 SPC24Q8NBT2 197 aa21.37■■□□□ 1.01
PDZD3-202ENST00000355547 BRF1Q92994 677 aa21.37■■□□□ 1.01
PDZD3-202ENST00000355547 ZSCAN16Q9H4T2 348 aaPredicted RBP21.37■■□□□ 1.01
PDZD3-202ENST00000355547 RGPD5Q99666 1765 aa21.36■■□□□ 1.01
PDZD3-202ENST00000355547 TDRD7Q8NHU6 1098 aaKnown RBP21.36■■□□□ 1.01
PDZD3-202ENST00000355547 SMARCC2Q8TAQ2 1214 aa21.36■■□□□ 1.01
PDZD3-202ENST00000355547 DBNDD2Q9BQY9 259 aa21.36■■□□□ 1.01
PDZD3-202ENST00000355547 TATP17735 454 aaPredicted RBP21.36■■□□□ 1.01
PDZD3-202ENST00000355547 CASP7P55210 303 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms