RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 GIGYF1O75420 1035 aaPredicted RBP11.08□□□□□ -0.64
SMG6-202ENST00000354901 EP400NLQ6ZTU2 488 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 RIC3Q7Z5B4 369 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 FERMT3Q86UX7 667 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 SUCLG2Q96I99 432 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 BICC1Q9H694 974 aaKnown RBP11.08□□□□□ -0.64
SMG6-202ENST00000354901 TLR7Q9NYK1 1049 aaKnown RBP11.08□□□□□ -0.64
SMG6-202ENST00000354901 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 NDUFB9Q9Y6M9 179 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 STX6O43752 255 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 PHF14O94880 888 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 ATF3P18847 181 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 GYS2P54840 703 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 EDC3Q96F86 508 aaKnown RBP11.08□□□□□ -0.64
SMG6-202ENST00000354901 G3BP1Q13283 466 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMG6-202ENST00000354901 KSR2Q6VAB6 950 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 PDRG1Q9NUG6 133 aa11.08□□□□□ -0.64
SMG6-202ENST00000354901 GJB2P29033 226 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 RUFY2Q8WXA3 655 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 NLRP2Q9NX02 1062 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 DDX41Q9UJV9 622 aaKnown RBP11.07□□□□□ -0.64
SMG6-202ENST00000354901 STRCQ7RTU9 1775 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 TMEM94Q12767 1356 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 PLEKHG2Q9H7P9 1386 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 ZSCAN22P10073 491 aaPredicted RBP11.07□□□□□ -0.64
SMG6-202ENST00000354901 FAM173BQ6P4H8 233 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 EAF2Q96CJ1 260 aaPredicted RBP11.07□□□□□ -0.64
SMG6-202ENST00000354901 TTC14Q96N46 770 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 DNM1Q05193 864 aaKnown RBP11.07□□□□□ -0.64
SMG6-202ENST00000354901 STK3Q13188 491 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 KIF18AQ8NI77 898 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 NOL10Q9BSC4 688 aaKnown RBP11.07□□□□□ -0.64
SMG6-202ENST00000354901 FSD1Q9BTV5 496 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 KCNF1Q9H3M0 494 aa11.07□□□□□ -0.64
SMG6-202ENST00000354901 RPAP1Q9BWH6 1393 aaPredicted RBP11.06□□□□□ -0.64
SMG6-202ENST00000354901 LRRC37A3O60309 1634 aa11.06□□□□□ -0.64
SMG6-202ENST00000354901 CAMTA1Q9Y6Y1 1673 aa11.06□□□□□ -0.64
SMG6-202ENST00000354901 GRM8O00222 908 aa11.06□□□□□ -0.64
SMG6-202ENST00000354901 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
SMG6-202ENST00000354901 NMIQ13287 307 aaPredicted RBP11.06□□□□□ -0.64
SMG6-202ENST00000354901 DDX17Q92841 729 aaKnown RBP11.06□□□□□ -0.64
SMG6-202ENST00000354901 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.06□□□□□ -0.64
SMG6-202ENST00000354901 PXDNQ92626 1479 aa11.06□□□□□ -0.64
SMG6-202ENST00000354901 KIAA1524Q8TCG1 905 aa11.06□□□□□ -0.64
SMG6-202ENST00000354901 FEZ2Q9UHY8 353 aaPredicted RBP11.06□□□□□ -0.64
SMG6-202ENST00000354901 RBM8AQ9Y5S9 174 aaKnown RBP11.06□□□□□ -0.64
SMG6-202ENST00000354901 CYP46A1Q9Y6A2 500 aa11.06□□□□□ -0.64
SMG6-202ENST00000354901 SASH1O94885 1247 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 RAD51AP2Q09MP3 1159 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 ELF2Q15723 593 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 HOXB7P09629 217 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 ZKSCAN1P17029 563 aaPredicted RBP11.05□□□□□ -0.64
SMG6-202ENST00000354901 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
SMG6-202ENST00000354901 HYPKQ9NX55 129 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 TAF6LQ9Y6J9 622 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 NCAPD2Q15021 1401 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 GOLGA6L6A8MZA4 724 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 TRIM66O15016 1216 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 F13A1P00488 732 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 AMOTQ4VCS5 1084 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 GORABQ5T7V8 394 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 CCDC186Q7Z3E2 898 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 ARHGEF25Q86VW2 580 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 MYD88Q99836 296 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 TRMT1Q9NXH9 659 aaKnown RBP11.05□□□□□ -0.64
SMG6-202ENST00000354901 CACNA1FO60840 1977 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 TTC41PQ6P2S7 1318 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 PXDNLA1KZ92 1463 aa11.05□□□□□ -0.64
SMG6-202ENST00000354901 CHGBP05060 677 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 ME3Q16798 604 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 KRT28Q7Z3Y7 464 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 KAZALD1Q96I82 304 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 MED1Q15648 1581 aaPredicted RBP11.04□□□□□ -0.64
SMG6-202ENST00000354901 XIRP1Q702N8 1843 aaKnown RBP11.04□□□□□ -0.64
SMG6-202ENST00000354901 A0A0D9SFI3 127 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 DDX58O95786 925 aaKnown RBP11.04□□□□□ -0.64
SMG6-202ENST00000354901 LINS1Q8NG48 757 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 XAGE3Q8WTP9 111 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 SPTLC3Q9NUV7 552 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 RGPD2P0DJD1 1756 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 CCDC171Q6TFL3 1326 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 KDM4AO75164 1064 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 ALDH1L1O75891 902 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 KMT5BQ4FZB7 885 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 CREB3L3Q68CJ9 461 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
SMG6-202ENST00000354901 COPS6Q7L5N1 327 aa11.04□□□□□ -0.64
SMG6-202ENST00000354901 NPHP3Q7Z494 1330 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 ATP5J2-PTCD1G3V325 749 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 PTCD1O75127 700 aaKnown RBP11.03□□□□□ -0.64
SMG6-202ENST00000354901 EPHA10Q5JZY3 1008 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 CABLES1Q8TDN4 633 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 RAPGEF4Q8WZA2 1011 aa11.03□□□□□ -0.64
SMG6-202ENST00000354901 EVI5LQ96CN4 794 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms