RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 CFAP45Q9UL16 551 aa16.36■□□□□ 0.21
LRP8-203ENST00000354412 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
LRP8-203ENST00000354412 CTAGE5O15320 804 aa16.35■□□□□ 0.21
LRP8-203ENST00000354412 FAM173BQ6P4H8 233 aa16.35■□□□□ 0.21
LRP8-203ENST00000354412 DNAAF4Q8WXU2 420 aa16.35■□□□□ 0.21
LRP8-203ENST00000354412 NR1I2O75469 434 aa16.35■□□□□ 0.21
LRP8-203ENST00000354412 SLFN14P0C7P3 912 aa16.35■□□□□ 0.21
LRP8-203ENST00000354412 MTX1Q13505 466 aa16.35■□□□□ 0.21
LRP8-203ENST00000354412 CRYBG1Q9Y4K1 1723 aa16.35■□□□□ 0.21
LRP8-203ENST00000354412 BEND3Q5T5X7 828 aa16.34■□□□□ 0.21
LRP8-203ENST00000354412 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
LRP8-203ENST00000354412 IL17REQ8NFR9 667 aa16.34■□□□□ 0.21
LRP8-203ENST00000354412 ERO1AQ96HE7 468 aa16.34■□□□□ 0.21
LRP8-203ENST00000354412 DDX17Q92841 729 aaKnown RBP16.34■□□□□ 0.21
LRP8-203ENST00000354412 ZSCAN16Q9H4T2 348 aaPredicted RBP16.34■□□□□ 0.21
LRP8-203ENST00000354412 KIF1AQ12756 1690 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 SLC27A2O14975 620 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 HOXB7P09629 217 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 TERF2Q15554 542 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.21
LRP8-203ENST00000354412 CREBRFQ8IUR6 639 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 SNRKQ9NRH2 765 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 HMG20BQ9P0W2 317 aa16.33■□□□□ 0.21
LRP8-203ENST00000354412 SKILP12757 684 aa16.33■□□□□ 0.2
LRP8-203ENST00000354412 RPS6KB1P23443 525 aa16.33■□□□□ 0.2
LRP8-203ENST00000354412 NYAP1Q6ZVC0 841 aa16.33■□□□□ 0.2
LRP8-203ENST00000354412 PSME1Q06323 249 aa16.33■□□□□ 0.2
LRP8-203ENST00000354412 CCDC144BQ3MJ40 725 aa16.33■□□□□ 0.2
LRP8-203ENST00000354412 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.2
LRP8-203ENST00000354412 BECN2A8MW95 431 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 DTNBO60941 627 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 NAA30Q147X3 362 aaPredicted RBP16.32■□□□□ 0.2
LRP8-203ENST00000354412 STX1AQ16623 288 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 KCND1Q9NSA2 647 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 IQCB1Q15051 598 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 TSGA10IPQ3SY00 556 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
LRP8-203ENST00000354412 PGBD1Q96JS3 809 aa16.32■□□□□ 0.2
LRP8-203ENST00000354412 KRT32Q14532 448 aa16.31■□□□□ 0.2
LRP8-203ENST00000354412 ZNF215Q9UL58 517 aaPredicted RBP16.31■□□□□ 0.2
LRP8-203ENST00000354412 SLIT3O75094 1523 aa16.31■□□□□ 0.2
LRP8-203ENST00000354412 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
LRP8-203ENST00000354412 GSDMDP57764 484 aa16.31■□□□□ 0.2
LRP8-203ENST00000354412 KMT5BQ4FZB7 885 aa16.31■□□□□ 0.2
LRP8-203ENST00000354412 H3BQV1 296 aa16.3■□□□□ 0.2
LRP8-203ENST00000354412 SLU7O95391 586 aaKnown RBP16.3■□□□□ 0.2
LRP8-203ENST00000354412 NMIQ13287 307 aaPredicted RBP16.3■□□□□ 0.2
LRP8-203ENST00000354412 IFFO2Q5TF58 517 aa16.3■□□□□ 0.2
LRP8-203ENST00000354412 KCNH5Q8NCM2 988 aa16.3■□□□□ 0.2
LRP8-203ENST00000354412 TOB2Q14106 344 aaPredicted RBP16.3■□□□□ 0.2
LRP8-203ENST00000354412 AACSQ86V21 672 aa16.3■□□□□ 0.2
LRP8-203ENST00000354412 FAM53CQ9NYF3 392 aa16.3■□□□□ 0.2
LRP8-203ENST00000354412 TRPM3Q9HCF6 1732 aaPredicted RBP16.29■□□□□ 0.2
LRP8-203ENST00000354412 TUBB4AP04350 444 aa16.29■□□□□ 0.2
LRP8-203ENST00000354412 DHX8Q14562 1220 aaKnown RBP16.29■□□□□ 0.2
LRP8-203ENST00000354412 FAM227BQ96M60 508 aa16.29■□□□□ 0.2
LRP8-203ENST00000354412 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
LRP8-203ENST00000354412 IP6K1Q92551 441 aa16.29■□□□□ 0.2
LRP8-203ENST00000354412 NAT10Q9H0A0 1025 aaKnown RBP16.29■□□□□ 0.2
LRP8-203ENST00000354412 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
LRP8-203ENST00000354412 LMO7Q8WWI1 1683 aa16.28■□□□□ 0.2
LRP8-203ENST00000354412 CCDC69A6NI79 296 aa16.28■□□□□ 0.2
LRP8-203ENST00000354412 ALDH1L1O75891 902 aa16.28■□□□□ 0.2
LRP8-203ENST00000354412 CCAR2Q8N163 923 aaKnown RBP16.28■□□□□ 0.2
LRP8-203ENST00000354412 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
LRP8-203ENST00000354412 RESTQ13127 1097 aa16.28■□□□□ 0.2
LRP8-203ENST00000354412 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
LRP8-203ENST00000354412 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.2
LRP8-203ENST00000354412 STK3Q13188 491 aa16.27■□□□□ 0.2
LRP8-203ENST00000354412 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
LRP8-203ENST00000354412 ATL3Q6DD88 541 aa16.27■□□□□ 0.2
LRP8-203ENST00000354412 CCDC73Q6ZRK6 1079 aa16.27■□□□□ 0.2
LRP8-203ENST00000354412 GTF3C6Q969F1 213 aa16.27■□□□□ 0.2
LRP8-203ENST00000354412 IMPACTQ9P2X3 320 aa16.27■□□□□ 0.2
LRP8-203ENST00000354412 EIF4A1P60842 406 aaKnown RBP16.27■□□□□ 0.19
LRP8-203ENST00000354412 G3BP1Q13283 466 aaKnown RBP eCLIP16.27■□□□□ 0.19
LRP8-203ENST00000354412 FILIP1Q7Z7B0 1213 aa16.27■□□□□ 0.19
LRP8-203ENST00000354412 FSD1Q9BTV5 496 aa16.27■□□□□ 0.19
LRP8-203ENST00000354412 USP27XA6NNY8 438 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 NRDCO43847 1150 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
LRP8-203ENST00000354412 FGD1P98174 961 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 FBXO38Q6PIJ6 1188 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 CEP57L1Q8IYX8 460 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 BRF1Q92994 677 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 TCEANC2Q96MN5 208 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 CALCOCO1Q9P1Z2 691 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 CCZ1BP86790 482 aa16.26■□□□□ 0.19
LRP8-203ENST00000354412 CCZ1P86791 482 aaPredicted RBP16.26■□□□□ 0.19
LRP8-203ENST00000354412 MST1RQ04912 1400 aa16.25■□□□□ 0.19
LRP8-203ENST00000354412 ELF2Q15723 593 aa16.25■□□□□ 0.19
LRP8-203ENST00000354412 C11orf57Q6ZUT1 292 aaPredicted RBP16.25■□□□□ 0.19
LRP8-203ENST00000354412 CCAR1Q8IX12 1150 aaKnown RBP16.25■□□□□ 0.19
LRP8-203ENST00000354412 TIGD1Q96MW7 591 aa16.25■□□□□ 0.19
LRP8-203ENST00000354412 LLPHQ9BRT6 129 aaKnown RBP16.25■□□□□ 0.19
LRP8-203ENST00000354412 TRMT1Q9NXH9 659 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms