RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 CHD1O14646 1710 aa14.32□□□□□ -0.12
TRERF1-202ENST00000354325 PNMA6AP0CW24 399 aaPredicted RBP14.31□□□□□ -0.12
TRERF1-202ENST00000354325 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRERF1-202ENST00000354325 SYT10Q6XYQ8 523 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 GTF3C6Q969F1 213 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 NR1I2O75469 434 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 RPS6KB1P23443 525 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 HNRNPH2P55795 449 aaKnown RBP14.31□□□□□ -0.12
TRERF1-202ENST00000354325 FSD1Q9BTV5 496 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 PIK3C2BO00750 1634 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 MYO1BO43795 1136 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 ME1P48163 572 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 ETF1P62495 437 aaKnown RBP14.31□□□□□ -0.12
TRERF1-202ENST00000354325 POLA2Q14181 598 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 FCHSD1Q86WN1 690 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
TRERF1-202ENST00000354325 KIDINS220Q9ULH0 1771 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 VGLL3A8MV65 326 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 POLR3GO15318 223 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 ERCC6LQ2NKX8 1250 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 NAA16Q6N069 864 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 ERCC4Q92889 916 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 MPHOSPH8Q99549 860 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 URI1O94763 535 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 CLCN6P51797 869 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 GORABQ5T7V8 394 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 LARP1Q6PKG0 1096 aaKnown RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 TMC6Q7Z403 805 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 CCDC144CPQ8IYA2 1237 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 GBP3Q9H0R5 595 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 USP16Q9Y5T5 823 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 NAA30Q147X3 362 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 HSP90B2PQ58FF3 399 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 GOLGA5Q8TBA6 731 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 TPCN1Q9ULQ1 816 aa14.3□□□□□ -0.12
TRERF1-202ENST00000354325 GPR161Q8N6U8 529 aaKnown RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 C9orf78Q9NZ63 289 aaPredicted RBP14.3□□□□□ -0.12
TRERF1-202ENST00000354325 GNAT3A8MTJ3 354 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 LARGE1O95461 756 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 TUBBP07437 444 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 IQCB1Q15051 598 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 AOPEPQ8N6M6 819 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 FSIP1Q8NA03 581 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 CFAP65Q6ZU64 1925 aaKnown RBP14.29□□□□□ -0.12
TRERF1-202ENST00000354325 NECTIN1Q15223 517 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 FAM107BQ9H098 131 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 BRF1Q92994 677 aa14.29□□□□□ -0.12
TRERF1-202ENST00000354325 U3KPZ7 1027 aaPredicted RBP14.29□□□□□ -0.12
TRERF1-202ENST00000354325 MAP2P11137 1827 aaKnown RBP14.28□□□□□ -0.12
TRERF1-202ENST00000354325 CPA1P15085 419 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 CCZ1BP86790 482 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 CCZ1P86791 482 aaPredicted RBP14.28□□□□□ -0.12
TRERF1-202ENST00000354325 KRBA2Q6ZNG9 492 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 CCDC191Q8NCU4 936 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 MRPS27Q92552 414 aaKnown RBP14.28□□□□□ -0.12
TRERF1-202ENST00000354325 PPP1R13BQ96KQ4 1090 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 CRB1P82279 1406 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 SLC27A2O14975 620 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 CASQ1P31415 396 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
TRERF1-202ENST00000354325 MAP4K1Q92918 833 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 EXOC4Q96A65 974 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 ZSCAN26Q16670 478 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
TRERF1-202ENST00000354325 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
TRERF1-202ENST00000354325 HOOK1Q9UJC3 728 aaKnown RBP14.28□□□□□ -0.12
TRERF1-202ENST00000354325 OLFM4Q6UX06 510 aa14.27□□□□□ -0.12
TRERF1-202ENST00000354325 BPIFA3Q9BQP9 254 aa14.27□□□□□ -0.12
TRERF1-202ENST00000354325 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.12
TRERF1-202ENST00000354325 STK3Q13188 491 aa14.27□□□□□ -0.12
TRERF1-202ENST00000354325 AACSQ86V21 672 aa14.27□□□□□ -0.12
TRERF1-202ENST00000354325 SIRT1Q96EB6 747 aa14.27□□□□□ -0.12
TRERF1-202ENST00000354325 ORC3Q9UBD5 711 aaPredicted RBP14.27□□□□□ -0.12
TRERF1-202ENST00000354325 RCOR1Q9UKL0 485 aa14.27□□□□□ -0.12
TRERF1-202ENST00000354325 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
TRERF1-202ENST00000354325 TUBB2AQ13885 445 aa14.27□□□□□ -0.13
TRERF1-202ENST00000354325 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
TRERF1-202ENST00000354325 TUBB2BQ9BVA1 445 aa14.27□□□□□ -0.13
TRERF1-202ENST00000354325 TCHHQ07283 1943 aa14.27□□□□□ -0.13
TRERF1-202ENST00000354325 STK38Q15208 465 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 PSD3Q9NYI0 1048 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 NEK1Q96PY6 1258 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 HOXB7P09629 217 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 PTH1RQ03431 593 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 GOLGA1Q92805 767 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 RBM33Q96EV2 1170 aaKnown RBP14.26□□□□□ -0.13
TRERF1-202ENST00000354325 DEF6Q9H4E7 631 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 A0A1B0GUL7 405 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 PSME1Q06323 249 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 SMC1AQ14683 1233 aaKnown RBP14.26□□□□□ -0.13
TRERF1-202ENST00000354325 ADCK5Q3MIX3 580 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 KCNG4Q8TDN1 519 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 NECTIN2Q92692 538 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 CCDC34Q96HJ3 373 aa14.26□□□□□ -0.13
TRERF1-202ENST00000354325 FEZ2Q9UHY8 353 aaPredicted RBP14.26□□□□□ -0.13
TRERF1-202ENST00000354325 DHX16O60231 1041 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms