RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 MPNDQ8N594 471 aa21.11■□□□□ 0.97
DDX55-202ENST00000354291 RTFDC1Q9BY42 306 aaPredicted RBP21.11■□□□□ 0.97
DDX55-202ENST00000354291 GBA2Q9HCG7 927 aaPredicted RBP21.11■□□□□ 0.97
DDX55-202ENST00000354291 COL3A1P02461 1466 aaPredicted RBP21.11■□□□□ 0.97
DDX55-202ENST00000354291 CDHR2Q9BYE9 1310 aa21.1■□□□□ 0.97
DDX55-202ENST00000354291 NTSR2O95665 410 aa21.1■□□□□ 0.97
DDX55-202ENST00000354291 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
DDX55-202ENST00000354291 PPP1R42Q7Z4L9 355 aa21.1■□□□□ 0.97
DDX55-202ENST00000354291 CTU1Q7Z7A3 348 aaKnown RBP21.1■□□□□ 0.97
DDX55-202ENST00000354291 MICALL2Q8IY33 904 aa21.1■□□□□ 0.97
DDX55-202ENST00000354291 RIC1Q4ADV7 1423 aa21.1■□□□□ 0.97
DDX55-202ENST00000354291 KIAA2012Q0VF49 1180 aa21.09■□□□□ 0.97
DDX55-202ENST00000354291 SAMD7Q7Z3H4 446 aa21.09■□□□□ 0.97
DDX55-202ENST00000354291 ZNF34Q8IZ26 560 aa21.09■□□□□ 0.97
DDX55-202ENST00000354291 ZBTB12Q9Y330 459 aaPredicted RBP21.09■□□□□ 0.97
DDX55-202ENST00000354291 ABCC4O15439 1325 aa21.08■□□□□ 0.97
DDX55-202ENST00000354291 BBOX1O75936 387 aa21.08■□□□□ 0.97
DDX55-202ENST00000354291 RBM26Q5T8P6 1007 aaKnown RBP21.08■□□□□ 0.97
DDX55-202ENST00000354291 SP8Q8IXZ3 490 aa21.08■□□□□ 0.97
DDX55-202ENST00000354291 U2AF1L5P0DN76 240 aaPredicted RBP21.07■□□□□ 0.96
DDX55-202ENST00000354291 U2AF1Q01081 240 aaKnown RBP eCLIP21.07■□□□□ 0.96
DDX55-202ENST00000354291 TBC1D10BQ4KMP7 808 aaPredicted RBP21.07■□□□□ 0.96
DDX55-202ENST00000354291 CFAP53Q96M91 514 aa21.07■□□□□ 0.96
DDX55-202ENST00000354291 CSRNP1Q96S65 589 aa21.07■□□□□ 0.96
DDX55-202ENST00000354291 NUDCQ9Y266 331 aa21.07■□□□□ 0.96
DDX55-202ENST00000354291 IBTKQ9P2D0 1353 aaPredicted RBP21.07■□□□□ 0.96
DDX55-202ENST00000354291 YDJCA8MPS7 323 aa21.06■□□□□ 0.96
DDX55-202ENST00000354291 DCPSQ96C86 337 aaKnown RBP21.06■□□□□ 0.96
DDX55-202ENST00000354291 UTP14AQ9BVJ6 771 aaKnown RBP21.06■□□□□ 0.96
DDX55-202ENST00000354291 ADM5C9JUS6 153 aa21.05■□□□□ 0.96
DDX55-202ENST00000354291 HTATSF1O43719 755 aaKnown RBP21.05■□□□□ 0.96
DDX55-202ENST00000354291 GIGYF2Q6Y7W6 1299 aaKnown RBP21.05■□□□□ 0.96
DDX55-202ENST00000354291 HPS5Q9UPZ3 1129 aa21.05■□□□□ 0.96
DDX55-202ENST00000354291 PARP10Q53GL7 1025 aa21.04■□□□□ 0.96
DDX55-202ENST00000354291 SLC10A5Q5PT55 438 aa21.04■□□□□ 0.96
DDX55-202ENST00000354291 NUP98P52948 1817 aa21.04■□□□□ 0.96
DDX55-202ENST00000354291 PSMD14O00487 310 aa21.03■□□□□ 0.96
DDX55-202ENST00000354291 EGFRP00533 1210 aa21.03■□□□□ 0.96
DDX55-202ENST00000354291 DPF2Q92785 391 aa21.03■□□□□ 0.96
DDX55-202ENST00000354291 HCLS1P14317 486 aaPredicted RBP21.02■□□□□ 0.96
DDX55-202ENST00000354291 DDX46Q7L014 1031 aaKnown RBP21.02■□□□□ 0.96
DDX55-202ENST00000354291 HDAC9Q9UKV0 1011 aa21.02■□□□□ 0.96
DDX55-202ENST00000354291 SLC10A3P09131 477 aa21.01■□□□□ 0.95
DDX55-202ENST00000354291 EIF4A1P60842 406 aaKnown RBP21■□□□□ 0.95
DDX55-202ENST00000354291 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
DDX55-202ENST00000354291 DBNDD1Q9H9R9 158 aa21■□□□□ 0.95
DDX55-202ENST00000354291 RIMBP2O15034 1052 aa20.99■□□□□ 0.95
DDX55-202ENST00000354291 WASHC4Q2M389 1173 aa20.99■□□□□ 0.95
DDX55-202ENST00000354291 THUMPD2Q9BTF0 503 aaKnown RBP20.99■□□□□ 0.95
DDX55-202ENST00000354291 GRAPQ13588 217 aa20.98■□□□□ 0.95
DDX55-202ENST00000354291 PKN2Q16513 984 aaKnown RBP20.98■□□□□ 0.95
DDX55-202ENST00000354291 SULF1Q8IWU6 871 aa20.98■□□□□ 0.95
DDX55-202ENST00000354291 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
DDX55-202ENST00000354291 POLR2AP24928 1970 aaKnown RBP20.97■□□□□ 0.95
DDX55-202ENST00000354291 REM2Q8IYK8 340 aaPredicted RBP20.97■□□□□ 0.95
DDX55-202ENST00000354291 GCC1Q96CN9 775 aa20.97■□□□□ 0.95
DDX55-202ENST00000354291 KCNQ5Q9NR82 932 aa20.97■□□□□ 0.95
DDX55-202ENST00000354291 AKAP11Q9UKA4 1901 aa20.96■□□□□ 0.95
DDX55-202ENST00000354291 TBC1D8O95759 1140 aa20.96■□□□□ 0.95
DDX55-202ENST00000354291 NSFL1CQ9UNZ2 370 aaKnown RBP20.96■□□□□ 0.95
DDX55-202ENST00000354291 C6orf229H3BNL8 230 aa20.95■□□□□ 0.94
DDX55-202ENST00000354291 RPS12P25398 132 aaKnown RBP20.95■□□□□ 0.94
DDX55-202ENST00000354291 DOK7Q18PE1 504 aa20.95■□□□□ 0.94
DDX55-202ENST00000354291 KIF4BQ2VIQ3 1234 aa20.95■□□□□ 0.94
DDX55-202ENST00000354291 RASAL3Q86YV0 1011 aa20.95■□□□□ 0.94
DDX55-202ENST00000354291 ZNF296Q8WUU4 475 aaPredicted RBP20.95■□□□□ 0.94
DDX55-202ENST00000354291 ZNF428Q96B54 188 aa20.95■□□□□ 0.94
DDX55-202ENST00000354291 CDCA5Q96FF9 252 aa20.95■□□□□ 0.94
DDX55-202ENST00000354291 GGA3Q9NZ52 723 aa20.95■□□□□ 0.94
DDX55-202ENST00000354291 EIF2S2P20042 333 aaKnown RBP20.94■□□□□ 0.94
DDX55-202ENST00000354291 TRMT112Q9UI30 125 aaKnown RBP20.94■□□□□ 0.94
DDX55-202ENST00000354291 ASTN2O75129 1339 aaPredicted RBP20.94■□□□□ 0.94
DDX55-202ENST00000354291 ECE2O60344 883 aa20.92■□□□□ 0.94
DDX55-202ENST00000354291 ANXA1P04083 346 aa20.92■□□□□ 0.94
DDX55-202ENST00000354291 HABP4Q5JVS0 413 aaKnown RBP20.92■□□□□ 0.94
DDX55-202ENST00000354291 TMC4Q7Z404 712 aa20.92■□□□□ 0.94
DDX55-202ENST00000354291 NLRP10Q86W26 655 aa20.92■□□□□ 0.94
DDX55-202ENST00000354291 LAMB4A4D0S4 1761 aa20.91■□□□□ 0.94
DDX55-202ENST00000354291 NEFMP07197 916 aa20.91■□□□□ 0.94
DDX55-202ENST00000354291 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
DDX55-202ENST00000354291 ERBB4Q15303 1308 aa20.91■□□□□ 0.94
DDX55-202ENST00000354291 POLLQ9UGP5 575 aa20.91■□□□□ 0.94
DDX55-202ENST00000354291 SH3TC1Q8TE82 1336 aa20.9■□□□□ 0.94
DDX55-202ENST00000354291 PROSER3Q2NL68 480 aa20.9■□□□□ 0.94
DDX55-202ENST00000354291 RTL9Q8NET4 1388 aa20.89■□□□□ 0.93
DDX55-202ENST00000354291 GPSM2P81274 684 aa20.89■□□□□ 0.93
DDX55-202ENST00000354291 SCARF1Q14162 830 aa20.89■□□□□ 0.93
DDX55-202ENST00000354291 PDIA6Q15084 440 aa20.89■□□□□ 0.93
DDX55-202ENST00000354291 HSP90AB3PQ58FF7 597 aa20.89■□□□□ 0.93
DDX55-202ENST00000354291 ANGEL2Q5VTE6 544 aaKnown RBP20.89■□□□□ 0.93
DDX55-202ENST00000354291 FBXO46Q6PJ61 603 aaPredicted RBP20.89■□□□□ 0.93
DDX55-202ENST00000354291 MOB2Q70IA6 237 aa20.89■□□□□ 0.93
DDX55-202ENST00000354291 LRP10Q7Z4F1 713 aa20.89■□□□□ 0.93
DDX55-202ENST00000354291 MKI67P46013 3256 aaKnown RBP20.89■□□□□ 0.93
DDX55-202ENST00000354291 G3V3G9 751 aa20.88■□□□□ 0.93
DDX55-202ENST00000354291 UBE2Q2LH0YL09 131 aa20.88■□□□□ 0.93
DDX55-202ENST00000354291 DCAF8Q5TAQ9 597 aa20.88■□□□□ 0.93
DDX55-202ENST00000354291 COPS6Q7L5N1 327 aa20.88■□□□□ 0.93
DDX55-202ENST00000354291 CELF1Q92879 486 aaKnown RBP20.88■□□□□ 0.93
DDX55-202ENST00000354291 EYA3Q99504 573 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms