RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 RXRAP19793 462 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 CTR9Q6PD62 1173 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC65Q8IXS2 484 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 YEATS4O95619 227 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 MYCP01106 439 aaPredicted RBP11.44□□□□□ -0.58
COL11A1-201ENST00000353414 UBA7P41226 1012 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 RAB3GAP1Q15042 981 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 TRIM47Q96LD4 638 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 FGD6Q6ZV73 1430 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 BRD4O60885 1362 aaPredicted RBP11.44□□□□□ -0.58
COL11A1-201ENST00000353414 ZHX1Q9UKY1 873 aaPredicted RBP11.44□□□□□ -0.58
COL11A1-201ENST00000353414 ACTN2P35609 894 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 FANCIQ9NVI1 1328 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 PPP1R42Q7Z4L9 355 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 TBC1D5Q92609 795 aa11.44□□□□□ -0.58
COL11A1-201ENST00000353414 GLRX3O76003 335 aaKnown RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 ANO10Q9NW15 660 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 ODF2LQ9ULJ1 636 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 EAPPQ56P03 285 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 ZNF830Q96NB3 372 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 HDAC9Q9UKV0 1011 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 MARCKSP29966 332 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 STAT6P42226 847 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 FLIIQ13045 1269 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 SLC52A1Q9NWF4 448 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 CGNQ9P2M7 1197 aaKnown RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 NCAPD3P42695 1498 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 KRT9P35527 623 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 PDCL2Q8N4E4 241 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 HAUS7Q99871 368 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 USP25Q9UHP3 1055 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 ANKRD30BQ9BXX2 1392 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 SSFA2P28290 1259 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 ERCC5P28715 1186 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 BMS1Q14692 1282 aaKnown RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 TTF1Q15361 905 aaPredicted RBP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 SMARCC2Q8TAQ2 1214 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 DNAAF4Q8WXU2 420 aa11.43□□□□□ -0.58
COL11A1-201ENST00000353414 NIP7Q9Y221 180 aaKnown RBP eCLIP11.43□□□□□ -0.58
COL11A1-201ENST00000353414 IARSP41252 1262 aaKnown RBP11.42□□□□□ -0.58
COL11A1-201ENST00000353414 ZKSCAN3Q9BRR0 538 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 PLCB3Q01970 1234 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 BIRC2Q13490 618 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 NOP9Q86U38 636 aaKnown RBP11.42□□□□□ -0.58
COL11A1-201ENST00000353414 FERMT1Q9BQL6 677 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 CRNKL1Q9BZJ0 848 aaKnown RBP11.42□□□□□ -0.58
COL11A1-201ENST00000353414 RPGRIP1LQ68CZ1 1315 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC175P0C221 793 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 C20orf194Q5TEA3 1177 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 KIF5BP33176 963 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 CFTRP13569 1480 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 DDX39AO00148 427 aaKnown RBP11.42□□□□□ -0.58
COL11A1-201ENST00000353414 RRAGBQ5VZM2 374 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 ANKRD24Q8TF21 1146 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 TAOK3Q9H2K8 898 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 RNF41Q9H4P4 317 aaPredicted RBP11.42□□□□□ -0.58
COL11A1-201ENST00000353414 CHMP2AO43633 222 aa11.42□□□□□ -0.58
COL11A1-201ENST00000353414 NOD1Q9Y239 953 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
COL11A1-201ENST00000353414 NAPAP54920 295 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 AMPD3Q01432 767 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC25Q86WR0 208 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 CAPZA3Q96KX2 299 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 ALS2CR12Q96Q35 445 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 GABPAQ06546 454 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 UAP1Q16222 522 aaPredicted RBP11.41□□□□□ -0.58
COL11A1-201ENST00000353414 ANO3Q9BYT9 981 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 PARP3Q9Y6F1 533 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 NCOA2Q15596 1464 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 KRT5P13647 590 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 RNF34Q969K3 372 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 ORC3Q9UBD5 711 aaPredicted RBP11.41□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 PHF8Q9UPP1 1060 aa11.41□□□□□ -0.58
COL11A1-201ENST00000353414 BACH1O14867 736 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 FAM13AO94988 1023 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 WDR63Q8IWG1 891 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 C9orf84Q5VXU9 1444 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 WTAPQ15007 396 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 KIF21AQ7Z4S6 1674 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 NSFL1CQ9UNZ2 370 aaKnown RBP11.4□□□□□ -0.58
COL11A1-201ENST00000353414 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 ZSCAN12O43309 604 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 POLD1P28340 1107 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 GTF2F1P35269 517 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL11A1-201ENST00000353414 CCDC183Q5T5S1 534 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 ERCC3P19447 782 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 MCM7P33993 719 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 NCBP1Q09161 790 aaKnown RBP11.4□□□□□ -0.58
COL11A1-201ENST00000353414 SF3A3Q12874 501 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL11A1-201ENST00000353414 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 HYPKQ9NX55 129 aa11.4□□□□□ -0.58
COL11A1-201ENST00000353414 PI4KAP2A4QPH2 592 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 PDE3AQ14432 1141 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 GEN1Q17RS7 908 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 KIAA0753Q2KHM9 967 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 NBPF8Q3BBV2 869 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 PPP1R21Q6ZMI0 780 aa11.4□□□□□ -0.59
COL11A1-201ENST00000353414 PI4KAP1Q8N8J0 262 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms