RNA–Protein interactions for RNA: ENST00000353024.4

TUFT1-201, Transcript of tuftelin 1, humanhuman

TSL 2 BASIC

Gene TUFT1, Length 2,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFT1-201ENST00000353024 RUFY3Q7L099 469 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 NLRP10Q86W26 655 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 SYTL4Q96C24 671 aaPredicted RBP18.56■□□□□ 0.56
TUFT1-201ENST00000353024 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 CDHR2Q9BYE9 1310 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 FSD2A1L4K1 749 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 TIMM10P62072 90 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 SKOR2Q2VWA4 1001 aaPredicted RBP18.56■□□□□ 0.56
TUFT1-201ENST00000353024 GZF1Q9H116 711 aaPredicted RBP18.56■□□□□ 0.56
TUFT1-201ENST00000353024 FBXO3Q9UK99 471 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 SLIT2O94813 1529 aa18.56■□□□□ 0.56
TUFT1-201ENST00000353024 BRD1O95696 1058 aa18.55■□□□□ 0.56
TUFT1-201ENST00000353024 CPA1P15085 419 aa18.55■□□□□ 0.56
TUFT1-201ENST00000353024 CASTP20810 708 aaKnown RBP18.55■□□□□ 0.56
TUFT1-201ENST00000353024 DDB1Q16531 1140 aa18.55■□□□□ 0.56
TUFT1-201ENST00000353024 ANKRD36CQ5JPF3 1778 aa18.55■□□□□ 0.56
TUFT1-201ENST00000353024 RPAP1Q9BWH6 1393 aaPredicted RBP18.55■□□□□ 0.56
TUFT1-201ENST00000353024 SLC27A2O14975 620 aa18.55■□□□□ 0.56
TUFT1-201ENST00000353024 TAF5LO75529 589 aa18.55■□□□□ 0.56
TUFT1-201ENST00000353024 IL6STP40189 918 aaPredicted RBP18.55■□□□□ 0.56
TUFT1-201ENST00000353024 MARCH10Q8NA82 808 aaPredicted RBP18.55■□□□□ 0.56
TUFT1-201ENST00000353024 HSP90AB3PQ58FF7 597 aa18.54■□□□□ 0.56
TUFT1-201ENST00000353024 VPS53Q5VIR6 699 aa18.54■□□□□ 0.56
TUFT1-201ENST00000353024 SYNE4Q8N205 404 aa18.54■□□□□ 0.56
TUFT1-201ENST00000353024 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
TUFT1-201ENST00000353024 DNAJC2Q99543 621 aaKnown RBP18.54■□□□□ 0.56
TUFT1-201ENST00000353024 LIMCH1Q9UPQ0 1083 aa18.54■□□□□ 0.56
TUFT1-201ENST00000353024 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
TUFT1-201ENST00000353024 ERVV-1B6SEH8 477 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 CHGBP05060 677 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 CCDC57Q2TAC2 916 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 USPL1Q5W0Q7 1092 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 KBTBD3Q8NAB2 608 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 NEUROD6Q96NK8 337 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 A0A1B0GUL7 405 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 GOLGA6L22H0YM25 854 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 BARGINQ6ZT62 677 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 PALLDQ8WX93 1383 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
TUFT1-201ENST00000353024 GPTP24298 496 aa18.52■□□□□ 0.56
TUFT1-201ENST00000353024 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.56
TUFT1-201ENST00000353024 TICAM2Q86XR7 235 aa18.52■□□□□ 0.56
TUFT1-201ENST00000353024 LMBRD1Q9NUN5 540 aa18.52■□□□□ 0.56
TUFT1-201ENST00000353024 NUP98P52948 1817 aa18.52■□□□□ 0.56
TUFT1-201ENST00000353024 ZKSCAN1P17029 563 aaPredicted RBP18.52■□□□□ 0.55
TUFT1-201ENST00000353024 COL9A3Q14050 684 aaPredicted RBP18.52■□□□□ 0.55
TUFT1-201ENST00000353024 TSGA10IPQ3SY00 556 aa18.52■□□□□ 0.55
TUFT1-201ENST00000353024 MCTP1Q6DN14 999 aa18.52■□□□□ 0.55
TUFT1-201ENST00000353024 ARXQ96QS3 562 aa18.52■□□□□ 0.55
TUFT1-201ENST00000353024 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.55
TUFT1-201ENST00000353024 CYP46A1Q9Y6A2 500 aa18.52■□□□□ 0.55
TUFT1-201ENST00000353024 EIF5P55010 431 aaKnown RBP18.51■□□□□ 0.55
TUFT1-201ENST00000353024 L1TD1Q5T7N2 865 aaKnown RBP18.51■□□□□ 0.55
TUFT1-201ENST00000353024 INTS5Q6P9B9 1019 aaKnown RBP18.51■□□□□ 0.55
TUFT1-201ENST00000353024 TTLL11Q8NHH1 800 aa18.51■□□□□ 0.55
TUFT1-201ENST00000353024 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.51■□□□□ 0.55
TUFT1-201ENST00000353024 CEP126Q9P2H0 1117 aa18.51■□□□□ 0.55
TUFT1-201ENST00000353024 TAF6LQ9Y6J9 622 aa18.51■□□□□ 0.55
TUFT1-201ENST00000353024 RREB1Q92766 1687 aa18.51■□□□□ 0.55
TUFT1-201ENST00000353024 CICQ96RK0 1608 aaPredicted RBP18.51■□□□□ 0.55
TUFT1-201ENST00000353024 NUTM2BA6NNL0 878 aaPredicted RBP18.5■□□□□ 0.55
TUFT1-201ENST00000353024 NUTM2EB1AL46 878 aaPredicted RBP18.5■□□□□ 0.55
TUFT1-201ENST00000353024 LARGE1O95461 756 aa18.5■□□□□ 0.55
TUFT1-201ENST00000353024 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
TUFT1-201ENST00000353024 NUTM2AQ8IVF1 878 aaPredicted RBP18.5■□□□□ 0.55
TUFT1-201ENST00000353024 ZNF34Q8IZ26 560 aa18.5■□□□□ 0.55
TUFT1-201ENST00000353024 SEC62Q99442 399 aaKnown RBP18.5■□□□□ 0.55
TUFT1-201ENST00000353024 PAG1Q9NWQ8 432 aa18.5■□□□□ 0.55
TUFT1-201ENST00000353024 SH3TC1Q8TE82 1336 aa18.5■□□□□ 0.55
TUFT1-201ENST00000353024 KCNJ4P48050 445 aa18.5■□□□□ 0.55
TUFT1-201ENST00000353024 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
TUFT1-201ENST00000353024 LARP6Q9BRS8 491 aaKnown RBP18.5■□□□□ 0.55
TUFT1-201ENST00000353024 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
TUFT1-201ENST00000353024 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 IFIT5Q13325 482 aaKnown RBP18.49■□□□□ 0.55
TUFT1-201ENST00000353024 MCMDC2Q4G0Z9 681 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 CCDC85AQ96PX6 553 aaPredicted RBP18.49■□□□□ 0.55
TUFT1-201ENST00000353024 HMG20BQ9P0W2 317 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 TBC1D2BQ9UPU7 963 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 RIC1Q4ADV7 1423 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 GOLIM4O00461 696 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 CTSWP56202 376 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 RNF20Q5VTR2 975 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 CHAMP1Q96JM3 812 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 RIPOR2Q9Y4F9 1068 aa18.49■□□□□ 0.55
TUFT1-201ENST00000353024 TOM1O60784 492 aa18.48■□□□□ 0.55
TUFT1-201ENST00000353024 CCDC129Q6ZRS4 1044 aa18.48■□□□□ 0.55
TUFT1-201ENST00000353024 ALDH8A1Q9H2A2 487 aaPredicted RBP18.48■□□□□ 0.55
TUFT1-201ENST00000353024 GREM2Q9H772 168 aa18.48■□□□□ 0.55
TUFT1-201ENST00000353024 ISY1Q9ULR0 285 aaKnown RBP18.48■□□□□ 0.55
TUFT1-201ENST00000353024 GOLGA6L3A6NEY3 463 aa18.47■□□□□ 0.55
TUFT1-201ENST00000353024 IRS4O14654 1257 aaPredicted RBP18.47■□□□□ 0.55
TUFT1-201ENST00000353024 PSMA5P28066 241 aa18.47■□□□□ 0.55
TUFT1-201ENST00000353024 PIP4K2BP78356 416 aa18.47■□□□□ 0.55
TUFT1-201ENST00000353024 ST3GAL1Q11201 340 aa18.47■□□□□ 0.55
TUFT1-201ENST00000353024 CCDC87Q9NVE4 849 aa18.47■□□□□ 0.55
TUFT1-201ENST00000353024 AKAP2Q9Y2D5 859 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms