RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 GOLGA6L4A6NEF3 574 aa17.57■□□□□ 0.4
TRAF3-202ENST00000351691 CAMK4Q16566 473 aa17.57■□□□□ 0.4
TRAF3-202ENST00000351691 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.57■□□□□ 0.4
TRAF3-202ENST00000351691 CYP46A1Q9Y6A2 500 aa17.57■□□□□ 0.4
TRAF3-202ENST00000351691 USP42Q9H9J4 1324 aaKnown RBP17.57■□□□□ 0.4
TRAF3-202ENST00000351691 SKILP12757 684 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 IQCB1Q15051 598 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 PLEKHO1Q53GL0 409 aaPredicted RBP17.56■□□□□ 0.4
TRAF3-202ENST00000351691 AKAP4Q5JQC9 854 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 LARP1BQ659C4 914 aaKnown RBP17.56■□□□□ 0.4
TRAF3-202ENST00000351691 CKAP2LQ8IYA6 745 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 RUFY2Q8WXA3 655 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 CCZ1BP86790 482 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 CCZ1P86791 482 aaPredicted RBP17.56■□□□□ 0.4
TRAF3-202ENST00000351691 ST3GAL1Q11201 340 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 MUM1L1Q5H9M0 696 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 PROSER2Q86WR7 435 aaPredicted RBP17.56■□□□□ 0.4
TRAF3-202ENST00000351691 NECTIN2Q92692 538 aa17.56■□□□□ 0.4
TRAF3-202ENST00000351691 GOLGA6L19H0YKK7 550 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 KCNJ6P48051 423 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 GSDMDP57764 484 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 DHX8Q14562 1220 aaKnown RBP17.55■□□□□ 0.4
TRAF3-202ENST00000351691 SPATA32Q96LK8 384 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 FHOD1Q9Y613 1164 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 ERICH4A6NGS2 130 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 USP27XA6NNY8 438 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 ATP8B1O43520 1251 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 HSP90AB4PQ58FF6 505 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 TEX35Q5T0J7 233 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 NBPF6Q5VWK0 638 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 NBPF4Q96M43 638 aa17.55■□□□□ 0.4
TRAF3-202ENST00000351691 ALDH8A1Q9H2A2 487 aaPredicted RBP17.55■□□□□ 0.4
TRAF3-202ENST00000351691 CTAGE5O15320 804 aa17.54■□□□□ 0.4
TRAF3-202ENST00000351691 HNRNPH2P55795 449 aaKnown RBP17.54■□□□□ 0.4
TRAF3-202ENST00000351691 PSME1Q06323 249 aa17.54■□□□□ 0.4
TRAF3-202ENST00000351691 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
TRAF3-202ENST00000351691 DNAJC25Q9H1X3 360 aa17.54■□□□□ 0.4
TRAF3-202ENST00000351691 SLIT3O75094 1523 aa17.54■□□□□ 0.4
TRAF3-202ENST00000351691 ME3Q16798 604 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 CCDC93Q567U6 631 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 TXLNBQ8N3L3 684 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 USHBP1Q8N6Y0 703 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 FEZ2Q9UHY8 353 aaPredicted RBP17.53■□□□□ 0.4
TRAF3-202ENST00000351691 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 CCDC69A6NI79 296 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 TPM4P67936 248 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 DNAAF4Q8WXU2 420 aa17.53■□□□□ 0.4
TRAF3-202ENST00000351691 JAKMIP1Q96N16 626 aaKnown RBP17.53■□□□□ 0.4
TRAF3-202ENST00000351691 PHAXQ9H814 394 aaKnown RBP17.53■□□□□ 0.4
TRAF3-202ENST00000351691 CDC37L1Q7L3B6 337 aa17.52■□□□□ 0.4
TRAF3-202ENST00000351691 FILIP1Q7Z7B0 1213 aa17.52■□□□□ 0.4
TRAF3-202ENST00000351691 LARP6Q9BRS8 491 aaKnown RBP17.52■□□□□ 0.4
TRAF3-202ENST00000351691 IMPACTQ9P2X3 320 aa17.52■□□□□ 0.4
TRAF3-202ENST00000351691 TTC41PQ6P2S7 1318 aa17.52■□□□□ 0.39
TRAF3-202ENST00000351691 TEFQ10587 303 aa17.52■□□□□ 0.39
TRAF3-202ENST00000351691 BEND3Q5T5X7 828 aa17.52■□□□□ 0.39
TRAF3-202ENST00000351691 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.39
TRAF3-202ENST00000351691 EFCC1Q9HA90 598 aa17.52■□□□□ 0.39
TRAF3-202ENST00000351691 CAMTA1Q9Y6Y1 1673 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 PSDA5PKW4 1024 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 ZRANB2O95218 330 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 PNMA6AP0CW24 399 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 ANKRD1Q15327 319 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 STX1AQ16623 288 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 OSBPL5Q9H0X9 879 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 TMEM94Q12767 1356 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 PLA2G4AP47712 749 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 ZNF530Q6P9A1 599 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 NUTM1Q86Y26 1132 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 LGR6Q9HBX8 967 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 ST7Q9NRC1 585 aa17.51■□□□□ 0.39
TRAF3-202ENST00000351691 ARGLU1Q9NWB6 273 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 V9GYY5 206 aaPredicted RBP17.51■□□□□ 0.39
TRAF3-202ENST00000351691 NR1I2O75469 434 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 SURF6O75683 361 aaKnown RBP17.5■□□□□ 0.39
TRAF3-202ENST00000351691 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 CLCN6P51797 869 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 ESCO1Q5FWF5 840 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 TAF7LQ5H9L4 462 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 RHPN1Q8TCX5 695 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 RGPD2P0DJD1 1756 aa17.5■□□□□ 0.39
TRAF3-202ENST00000351691 CPA1P15085 419 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 PSMA5P28066 241 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 SNW1Q13573 536 aaKnown RBP17.49■□□□□ 0.39
TRAF3-202ENST00000351691 NECTIN1Q15223 517 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 UBXN6Q9BZV1 441 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 BTBD11A6QL63 1104 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 RNMTO43148 476 aaKnown RBP17.49■□□□□ 0.39
TRAF3-202ENST00000351691 GLRX3O76003 335 aaKnown RBP17.49■□□□□ 0.39
TRAF3-202ENST00000351691 TPM1P09493 284 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
TRAF3-202ENST00000351691 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
TRAF3-202ENST00000351691 RAD51AP2Q09MP3 1159 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 MTX1Q13505 466 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 ADCK5Q3MIX3 580 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 ARHGEF25Q86VW2 580 aa17.49■□□□□ 0.39
TRAF3-202ENST00000351691 PGBD1Q96JS3 809 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms