RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 PTMSP20962 102 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 GJB2P29033 226 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 DNM1Q05193 864 aaKnown RBP12.39□□□□□ -0.43
SMPD4-201ENST00000351288 CUL4AQ13619 759 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 ABCF2Q9UG63 623 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 RBM8AQ9Y5S9 174 aaKnown RBP12.39□□□□□ -0.43
SMPD4-201ENST00000351288 SPATA31A3Q5VYP0 1347 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 FAM208AQ9UK61 1670 aaKnown RBP12.39□□□□□ -0.43
SMPD4-201ENST00000351288 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
SMPD4-201ENST00000351288 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 DDB1Q16531 1140 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 CLEC17AQ6ZS10 378 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 ZNF589Q86UQ0 364 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-201ENST00000351288 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
SMPD4-201ENST00000351288 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
SMPD4-201ENST00000351288 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
SMPD4-201ENST00000351288 ZNF445P59923 1031 aa12.38□□□□□ -0.43
SMPD4-201ENST00000351288 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
SMPD4-201ENST00000351288 PDIA6Q15084 440 aa12.38□□□□□ -0.43
SMPD4-201ENST00000351288 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
SMPD4-201ENST00000351288 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
SMPD4-201ENST00000351288 PHF14O94880 888 aa12.38□□□□□ -0.43
SMPD4-201ENST00000351288 DNTTIP2Q5QJE6 756 aaKnown RBP12.38□□□□□ -0.43
SMPD4-201ENST00000351288 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
SMPD4-201ENST00000351288 HOXB7P09629 217 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 ME3Q16798 604 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 LRRC24Q50LG9 513 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 GIMAP6Q6P9H5 292 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 LRSAM1Q6UWE0 723 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 TFIP11Q9UBB9 837 aaKnown RBP12.37□□□□□ -0.43
SMPD4-201ENST00000351288 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 STX6O43752 255 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 MCM2P49736 904 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 ANAPC15P60006 121 aa12.37□□□□□ -0.43
SMPD4-201ENST00000351288 FAM98CQ17RN3 349 aaKnown RBP12.37□□□□□ -0.43
SMPD4-201ENST00000351288 LARP1BQ659C4 914 aaKnown RBP12.37□□□□□ -0.43
SMPD4-201ENST00000351288 CAMK4Q16566 473 aa12.36□□□□□ -0.43
SMPD4-201ENST00000351288 BABAM1Q9NWV8 329 aa12.36□□□□□ -0.43
SMPD4-201ENST00000351288 C17orf53Q8N3J3 647 aaPredicted RBP12.36□□□□□ -0.43
SMPD4-201ENST00000351288 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
SMPD4-201ENST00000351288 JAG2Q9Y219 1238 aa12.36□□□□□ -0.43
SMPD4-201ENST00000351288 USP25Q9UHP3 1055 aa12.36□□□□□ -0.43
SMPD4-201ENST00000351288 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
SMPD4-201ENST00000351288 SNAP23O00161 211 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 CPLX1O14810 134 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 ATP2B1P20020 1258 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 RALYLQ86SE5 291 aaKnown RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 PLBD2Q8NHP8 589 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 TTC14Q96N46 770 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 TPCN1Q9ULQ1 816 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 R3HCC1Q9Y3T6 440 aaKnown RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 RPAP1Q9BWH6 1393 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 RBM10P98175 930 aaKnown RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 ZRSR1Q15695 479 aaKnown RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 CREB3L3Q68CJ9 461 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 DZIP3Q86Y13 1208 aaKnown RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 NFXL1Q6ZNB6 911 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 BICD2Q8TD16 824 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 MARF1Q9Y4F3 1742 aaKnown RBP12.35□□□□□ -0.43
SMPD4-201ENST00000351288 WDR17Q8IZU2 1322 aa12.35□□□□□ -0.43
SMPD4-201ENST00000351288 ZSCAN22P10073 491 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-201ENST00000351288 PSMA5P28066 241 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 ZSCAN30Q86W11 494 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 A0A0G2JLW4 131 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 ST3GAL1Q11201 340 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 TNNI3KQ59H18 835 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 TSPY26PQ9H489 355 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 FPGT-TNNI3KV9GXZ4 949 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 CCDC171Q6TFL3 1326 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 PIGBQ92521 554 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 ZBTB1Q9Y2K1 713 aa12.34□□□□□ -0.43
SMPD4-201ENST00000351288 A0A1B0GUL7 405 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 TAF5LO75529 589 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 TRDNQ13061 729 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 SF3A1Q15459 793 aaKnown RBP12.33□□□□□ -0.44
SMPD4-201ENST00000351288 PI16Q6UXB8 463 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 CCDC144CPQ8IYA2 1237 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 INTS4Q96HW7 963 aaKnown RBP12.33□□□□□ -0.44
SMPD4-201ENST00000351288 DBNLQ9UJU6 430 aaKnown RBP12.33□□□□□ -0.44
SMPD4-201ENST00000351288 NBPF26B4DH59 902 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 HIP1O00291 1037 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 NBPF14Q5TI25 921 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 NBPF10Q6P3W6 841 aaKnown RBP12.33□□□□□ -0.44
SMPD4-201ENST00000351288 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 NBPF15Q8N660 670 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 BRF1Q92994 677 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 PPP1R9BQ96SB3 815 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 BCL11BQ9C0K0 894 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-201ENST00000351288 SLC27A2O14975 620 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 MBD3O95983 291 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 CHAF1AQ13111 956 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-201ENST00000351288 DRC7Q8IY82 874 aa12.33□□□□□ -0.44
SMPD4-201ENST00000351288 NFAT5O94916 1531 aa12.32□□□□□ -0.44
SMPD4-201ENST00000351288 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-201ENST00000351288 JAK2O60674 1132 aa12.32□□□□□ -0.44
SMPD4-201ENST00000351288 F13A1P00488 732 aa12.32□□□□□ -0.44
SMPD4-201ENST00000351288 PIBF1Q8WXW3 757 aa12.32□□□□□ -0.44
SMPD4-201ENST00000351288 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms