RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 DDX54Q8TDD1 881 aaKnown RBP21.99■■□□□ 1.11
SCARF1-202ENST00000348987 N4BP2Q86UW6 1770 aaPredicted RBP21.99■■□□□ 1.11
SCARF1-202ENST00000348987 NPHP4O75161 1426 aaPredicted RBP21.99■■□□□ 1.11
SCARF1-202ENST00000348987 HOXB7P09629 217 aa21.99■■□□□ 1.11
SCARF1-202ENST00000348987 ADCK5Q3MIX3 580 aa21.99■■□□□ 1.11
SCARF1-202ENST00000348987 ADGRL3Q9HAR2 1447 aa21.99■■□□□ 1.11
SCARF1-202ENST00000348987 RGPD2P0DJD1 1756 aa21.98■■□□□ 1.11
SCARF1-202ENST00000348987 LARP1BQ659C4 914 aaKnown RBP21.98■■□□□ 1.11
SCARF1-202ENST00000348987 CDC37L1Q7L3B6 337 aa21.98■■□□□ 1.11
SCARF1-202ENST00000348987 PDRG1Q9NUG6 133 aa21.98■■□□□ 1.11
SCARF1-202ENST00000348987 CALCOCO1Q9P1Z2 691 aa21.98■■□□□ 1.11
SCARF1-202ENST00000348987 RNMTO43148 476 aaKnown RBP21.98■■□□□ 1.11
SCARF1-202ENST00000348987 DBF4Q9UBU7 674 aaPredicted RBP21.98■■□□□ 1.11
SCARF1-202ENST00000348987 GOLGA6L4A6NEF3 574 aa21.97■■□□□ 1.11
SCARF1-202ENST00000348987 GIGYF1O75420 1035 aaPredicted RBP21.97■■□□□ 1.11
SCARF1-202ENST00000348987 CAPN2P17655 700 aa21.97■■□□□ 1.11
SCARF1-202ENST00000348987 PTH1RQ03431 593 aa21.97■■□□□ 1.11
SCARF1-202ENST00000348987 ME3Q16798 604 aa21.97■■□□□ 1.11
SCARF1-202ENST00000348987 JAKMIP1Q96N16 626 aaKnown RBP21.97■■□□□ 1.11
SCARF1-202ENST00000348987 TRMT1Q9NXH9 659 aaKnown RBP21.97■■□□□ 1.11
SCARF1-202ENST00000348987 C9orf78Q9NZ63 289 aaPredicted RBP21.97■■□□□ 1.11
SCARF1-202ENST00000348987 TFIP11Q9UBB9 837 aaKnown RBP21.97■■□□□ 1.11
SCARF1-202ENST00000348987 PLEKHO1Q53GL0 409 aaPredicted RBP21.97■■□□□ 1.11
SCARF1-202ENST00000348987 TRERF1Q96PN7 1200 aa21.97■■□□□ 1.11
SCARF1-202ENST00000348987 ZNF446Q9NWS9 450 aa21.97■■□□□ 1.11
SCARF1-202ENST00000348987 USP54Q70EL1 1684 aa21.97■■□□□ 1.11
SCARF1-202ENST00000348987 NYAP1Q6ZVC0 841 aa21.96■■□□□ 1.11
SCARF1-202ENST00000348987 ADAMTSL3P82987 1691 aa21.96■■□□□ 1.11
SCARF1-202ENST00000348987 ERO1AQ96HE7 468 aa21.96■■□□□ 1.11
SCARF1-202ENST00000348987 CCDC171Q6TFL3 1326 aa21.96■■□□□ 1.11
SCARF1-202ENST00000348987 DNAJC2Q99543 621 aaKnown RBP21.95■■□□□ 1.11
SCARF1-202ENST00000348987 SKILP12757 684 aa21.95■■□□□ 1.1
SCARF1-202ENST00000348987 COL9A3Q14050 684 aaPredicted RBP21.95■■□□□ 1.1
SCARF1-202ENST00000348987 VPS53Q5VIR6 699 aa21.95■■□□□ 1.1
SCARF1-202ENST00000348987 KCNH5Q8NCM2 988 aa21.95■■□□□ 1.1
SCARF1-202ENST00000348987 ELP1O95163 1332 aa21.95■■□□□ 1.1
SCARF1-202ENST00000348987 ZNF142P52746 1687 aaPredicted RBP21.95■■□□□ 1.1
SCARF1-202ENST00000348987 TULP2O00295 520 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 NR1I2O75469 434 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 AIMP1Q12904 312 aaKnown RBP21.94■■□□□ 1.1
SCARF1-202ENST00000348987 C1orf141Q5JVX7 400 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 CLASRPQ8N2M8 674 aaKnown RBP21.94■■□□□ 1.1
SCARF1-202ENST00000348987 ANKRD24Q8TF21 1146 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 GLRX3O76003 335 aaKnown RBP21.94■■□□□ 1.1
SCARF1-202ENST00000348987 KRT28Q7Z3Y7 464 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 ARHGEF25Q86VW2 580 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 KAZALD1Q96I82 304 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 SPATA32Q96LK8 384 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 ZSCAN31Q96LW9 406 aaPredicted RBP21.94■■□□□ 1.1
SCARF1-202ENST00000348987 CLSTN2Q9H4D0 955 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 SH2B1Q9NRF2 756 aaPredicted RBP21.94■■□□□ 1.1
SCARF1-202ENST00000348987 ERBB3P21860 1342 aa21.94■■□□□ 1.1
SCARF1-202ENST00000348987 MTX1Q13505 466 aa21.93■■□□□ 1.1
SCARF1-202ENST00000348987 PRPF40BQ6NWY9 871 aaKnown RBP21.93■■□□□ 1.1
SCARF1-202ENST00000348987 RBM43Q6ZSC3 357 aaKnown RBP21.93■■□□□ 1.1
SCARF1-202ENST00000348987 NOL10Q9BSC4 688 aaKnown RBP21.93■■□□□ 1.1
SCARF1-202ENST00000348987 DDX19AQ9NUU7 478 aaKnown RBP21.93■■□□□ 1.1
SCARF1-202ENST00000348987 KDM3BQ7LBC6 1761 aa21.93■■□□□ 1.1
SCARF1-202ENST00000348987 HSP90AB4PQ58FF6 505 aa21.93■■□□□ 1.1
SCARF1-202ENST00000348987 KSR2Q6VAB6 950 aa21.93■■□□□ 1.1
SCARF1-202ENST00000348987 CABLES1Q8TDN4 633 aa21.93■■□□□ 1.1
SCARF1-202ENST00000348987 CYP46A1Q9Y6A2 500 aa21.93■■□□□ 1.1
SCARF1-202ENST00000348987 USP42Q9H9J4 1324 aaKnown RBP21.92■■□□□ 1.1
SCARF1-202ENST00000348987 SLU7O95391 586 aaKnown RBP21.92■■□□□ 1.1
SCARF1-202ENST00000348987 GTF3C6Q969F1 213 aa21.92■■□□□ 1.1
SCARF1-202ENST00000348987 ECHDC1Q9NTX5 307 aa21.92■■□□□ 1.1
SCARF1-202ENST00000348987 CDC25BP30305 580 aa21.92■■□□□ 1.1
SCARF1-202ENST00000348987 SLC20A2Q08357 652 aa21.92■■□□□ 1.1
SCARF1-202ENST00000348987 SLFNL1Q499Z3 407 aa21.92■■□□□ 1.1
SCARF1-202ENST00000348987 TTC41PQ6P2S7 1318 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 FILIP1Q7Z7B0 1213 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 AACSQ86V21 672 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 SUCLG2Q96I99 432 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 ZSWIM6Q9HCJ5 1215 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 TPCN1Q9ULQ1 816 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 USP16Q9Y5T5 823 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 CYP2C19P33261 490 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 HNRNPH2P55795 449 aaKnown RBP21.91■■□□□ 1.1
SCARF1-202ENST00000348987 KLHDC4Q8TBB5 520 aa21.91■■□□□ 1.1
SCARF1-202ENST00000348987 NPHP3Q7Z494 1330 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 GOLGA6L19H0YKK7 550 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 SLC39A6Q13433 755 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 AMOTQ4VCS5 1084 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 SCAND2PQ9GZW5 306 aaPredicted RBP21.9■■□□□ 1.1
SCARF1-202ENST00000348987 BICC1Q9H694 974 aaKnown RBP21.9■■□□□ 1.1
SCARF1-202ENST00000348987 TLR7Q9NYK1 1049 aaKnown RBP21.9■■□□□ 1.1
SCARF1-202ENST00000348987 SASH1O94885 1247 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 IFIT2P09913 472 aaKnown RBP21.9■■□□□ 1.1
SCARF1-202ENST00000348987 ERCC6LQ2NKX8 1250 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 BICD2Q8TD16 824 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 LEO1Q8WVC0 666 aaPredicted RBP21.9■■□□□ 1.1
SCARF1-202ENST00000348987 FAM227BQ96M60 508 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 CCDC8Q9H0W5 538 aaPredicted RBP21.9■■□□□ 1.1
SCARF1-202ENST00000348987 SIL1Q9H173 461 aa21.9■■□□□ 1.1
SCARF1-202ENST00000348987 CCDC69A6NI79 296 aa21.89■■□□□ 1.09
SCARF1-202ENST00000348987 EAF2Q96CJ1 260 aaPredicted RBP21.89■■□□□ 1.09
SCARF1-202ENST00000348987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.89■■□□□ 1.09
SCARF1-202ENST00000348987 BMS1Q14692 1282 aaKnown RBP21.89■■□□□ 1.09
SCARF1-202ENST00000348987 HEG1Q9ULI3 1381 aa21.88■■□□□ 1.09
SCARF1-202ENST00000348987 NEMFO60524 1076 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms