RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 CHRNA5P30532 468 aa16.01■□□□□ 0.15
ERGIC3-202ENST00000348547 CTSWP56202 376 aa16.01■□□□□ 0.15
ERGIC3-202ENST00000348547 FAM161AQ3B820 660 aa16.01■□□□□ 0.15
ERGIC3-202ENST00000348547 BRIP1Q9BX63 1249 aa16.01■□□□□ 0.15
ERGIC3-202ENST00000348547 GREM2Q9H772 168 aa16.01■□□□□ 0.15
ERGIC3-202ENST00000348547 PNMA6EA0A0J9YXQ4 647 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 GNAI3P08754 354 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 KCNA3P22001 575 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 CEP85Q6P2H3 762 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 LMBR1LQ6UX01 489 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 NLGN2Q8NFZ4 835 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 SEC31BQ9NQW1 1179 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 LTBP1Q14766 1721 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 RTL9Q8NET4 1388 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 PDE8AO60658 829 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 GNAI2P04899 355 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 POLD1P28340 1107 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 RFX5P48382 616 aaPredicted RBP16■□□□□ 0.15
ERGIC3-202ENST00000348547 MTX1Q13505 466 aa16■□□□□ 0.15
ERGIC3-202ENST00000348547 SF3B3Q15393 1217 aaKnown RBP16■□□□□ 0.15
ERGIC3-202ENST00000348547 SRGNP10124 158 aa15.99■□□□□ 0.15
ERGIC3-202ENST00000348547 ST5P78524 1137 aa15.99■□□□□ 0.15
ERGIC3-202ENST00000348547 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
ERGIC3-202ENST00000348547 KLHDC4Q8TBB5 520 aa15.98■□□□□ 0.15
ERGIC3-202ENST00000348547 A0A0G2JLW4 131 aa15.97■□□□□ 0.15
ERGIC3-202ENST00000348547 DPEP1P16444 411 aa15.97■□□□□ 0.15
ERGIC3-202ENST00000348547 HOXA10P31260 410 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-202ENST00000348547 FHDC1Q9C0D6 1143 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-202ENST00000348547 SNED1Q8TER0 1413 aa15.96■□□□□ 0.15
ERGIC3-202ENST00000348547 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.15
ERGIC3-202ENST00000348547 POLA2Q14181 598 aa15.96■□□□□ 0.15
ERGIC3-202ENST00000348547 C2CD5Q86YS7 1000 aa15.96■□□□□ 0.15
ERGIC3-202ENST00000348547 CELF1Q92879 486 aaKnown RBP15.96■□□□□ 0.15
ERGIC3-202ENST00000348547 ZNF594Q96JF6 807 aaPredicted RBP15.96■□□□□ 0.15
ERGIC3-202ENST00000348547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.96■□□□□ 0.15
ERGIC3-202ENST00000348547 ARFGEF1Q9Y6D6 1849 aa15.95■□□□□ 0.14
ERGIC3-202ENST00000348547 OLFM4Q6UX06 510 aa15.95■□□□□ 0.14
ERGIC3-202ENST00000348547 SSH3Q8TE77 659 aa15.95■□□□□ 0.14
ERGIC3-202ENST00000348547 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
ERGIC3-202ENST00000348547 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
ERGIC3-202ENST00000348547 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
ERGIC3-202ENST00000348547 NPHP1O15259 732 aa15.94■□□□□ 0.14
ERGIC3-202ENST00000348547 ITGA6P23229 1130 aa15.94■□□□□ 0.14
ERGIC3-202ENST00000348547 ATP8B2P98198 1209 aa15.94■□□□□ 0.14
ERGIC3-202ENST00000348547 PTPN12Q05209 780 aaKnown RBP15.94■□□□□ 0.14
ERGIC3-202ENST00000348547 SRGAP3O43295 1099 aa15.93■□□□□ 0.14
ERGIC3-202ENST00000348547 PDE6BP35913 854 aa15.93■□□□□ 0.14
ERGIC3-202ENST00000348547 PUS3Q9BZE2 481 aaKnown RBP15.93■□□□□ 0.14
ERGIC3-202ENST00000348547 WWC3Q9ULE0 1092 aa15.93■□□□□ 0.14
ERGIC3-202ENST00000348547 WTIPA6NIX2 430 aaPredicted RBP15.92■□□□□ 0.14
ERGIC3-202ENST00000348547 IGHDP01880 384 aa15.92■□□□□ 0.14
ERGIC3-202ENST00000348547 CCDC152Q4G0S7 254 aa15.92■□□□□ 0.14
ERGIC3-202ENST00000348547 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
ERGIC3-202ENST00000348547 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
ERGIC3-202ENST00000348547 NPR1P16066 1061 aa15.91■□□□□ 0.14
ERGIC3-202ENST00000348547 ATG9AQ7Z3C6 839 aa15.91■□□□□ 0.14
ERGIC3-202ENST00000348547 C7orf43Q8WVR3 580 aa15.91■□□□□ 0.14
ERGIC3-202ENST00000348547 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
ERGIC3-202ENST00000348547 SYT17Q9BSW7 474 aa15.91■□□□□ 0.14
ERGIC3-202ENST00000348547 CHMP3Q9Y3E7 222 aa15.91■□□□□ 0.14
ERGIC3-202ENST00000348547 H0YIN7 160 aa15.9■□□□□ 0.14
ERGIC3-202ENST00000348547 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
ERGIC3-202ENST00000348547 STYK1Q6J9G0 422 aa15.9■□□□□ 0.14
ERGIC3-202ENST00000348547 MASTLQ96GX5 879 aa15.9■□□□□ 0.14
ERGIC3-202ENST00000348547 FER1L6Q2WGJ9 1857 aa15.9■□□□□ 0.14
ERGIC3-202ENST00000348547 ARAP2Q8WZ64 1704 aa15.9■□□□□ 0.14
ERGIC3-202ENST00000348547 TGFB2P61812 414 aa15.89■□□□□ 0.13
ERGIC3-202ENST00000348547 GRAPQ13588 217 aa15.89■□□□□ 0.13
ERGIC3-202ENST00000348547 PRPF40BQ6NWY9 871 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-202ENST00000348547 RPAP2Q8IXW5 612 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-202ENST00000348547 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
ERGIC3-202ENST00000348547 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-202ENST00000348547 COPRSQ9NQ92 184 aa15.89■□□□□ 0.13
ERGIC3-202ENST00000348547 IFIT5Q13325 482 aaKnown RBP15.88■□□□□ 0.13
ERGIC3-202ENST00000348547 SIL1Q9H173 461 aa15.88■□□□□ 0.13
ERGIC3-202ENST00000348547 ANKRD18BA2A2Z9 1011 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 SNAP23O00161 211 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 HSP90B1P14625 803 aaKnown RBP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 RPS8P62241 208 aaKnown RBP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 HDAC1Q13547 482 aaPredicted RBP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 DDX46Q7L014 1031 aaKnown RBP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 VGLL2Q8N8G2 317 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 ZNF622Q969S3 477 aaKnown RBP eCLIP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 EXOC6BQ9Y2D4 811 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 NOP58Q9Y2X3 529 aaKnown RBP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 RIPOR2Q9Y4F9 1068 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 COL4A5P29400 1685 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 SASH1O94885 1247 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 NEFLP07196 543 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 AAMPQ13685 434 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 CCDC57Q2TAC2 916 aa15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 RBM17Q96I25 401 aaKnown RBP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
ERGIC3-202ENST00000348547 KDM2BQ8NHM5 1336 aa15.86■□□□□ 0.13
ERGIC3-202ENST00000348547 ZNF646O15015 1829 aaPredicted RBP15.86■□□□□ 0.13
ERGIC3-202ENST00000348547 PPEF1O14829 653 aaPredicted RBP15.86■□□□□ 0.13
ERGIC3-202ENST00000348547 EYA2O00167 538 aa15.85■□□□□ 0.13
ERGIC3-202ENST00000348547 YBX3P16989 372 aaKnown RBP eCLIP15.85■□□□□ 0.134e-11■□□□□ 11.2
ERGIC3-202ENST00000348547 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
ERGIC3-202ENST00000348547 HELBQ8NG08 1087 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms