RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 SLC39A6Q13433 755 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 SF3A1Q15459 793 aaKnown RBP6.52□□□□□ -1.37
VCAM1-202ENST00000347652 PTPROQ16827 1216 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 ZNF827Q17R98 1081 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 AMIGO3Q86WK7 504 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 STK32AQ8WU08 396 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 SLC4A9Q96Q91 983 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 EMILIN3Q9NT22 766 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 ATG3Q9NT62 314 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 PALLDQ8WX93 1383 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 CABP4P57796 275 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 TEFQ10587 303 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 DUSP27Q5VZP5 1158 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 TANGO6Q9C0B7 1094 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 PAPPAQ13219 1627 aa6.52□□□□□ -1.37
VCAM1-202ENST00000347652 GNPATO15228 680 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 BEGAINQ9BUH8 593 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 MIS18AQ9NYP9 233 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 BTBD11A6QL63 1104 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 PTCD1O75127 700 aaKnown RBP6.51□□□□□ -1.37
VCAM1-202ENST00000347652 ITPK1Q13572 414 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 MYSM1Q5VVJ2 828 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 MBIPQ9NS73 344 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 DMGDHQ9UI17 866 aaKnown RBP6.51□□□□□ -1.37
VCAM1-202ENST00000347652 CCNL1Q9UK58 526 aaPredicted RBP6.51□□□□□ -1.37
VCAM1-202ENST00000347652 PRR12Q9ULL5 1215 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 TUBGCP6Q96RT7 1819 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 FANCIQ9NVI1 1328 aa6.51□□□□□ -1.37
VCAM1-202ENST00000347652 GRXCR2A6NFK2 248 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 MSH5O43196 834 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 KCNQ3O43525 872 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 KIF4AO95239 1232 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 TSR2Q969E8 191 aaKnown RBP6.5□□□□□ -1.37
VCAM1-202ENST00000347652 BACH2Q9BYV9 841 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 TSPYL4Q9UJ04 414 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 TMA7Q9Y2S6 64 aaKnown RBP6.5□□□□□ -1.37
VCAM1-202ENST00000347652 KDM3BQ7LBC6 1761 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 TAF1LQ8IZX4 1826 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 LOC102724428A0A0B4J2F2 783 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 SIK1P57059 783 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 ZFYVE27Q5T4F4 411 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 SDE2Q6IQ49 451 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 LINC00116Q8NCU8 138 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 RBM42Q9BTD8 480 aaKnown RBP6.5□□□□□ -1.37
VCAM1-202ENST00000347652 C5P01031 1676 aa6.5□□□□□ -1.37
VCAM1-202ENST00000347652 MDM2Q00987 491 aaPredicted RBP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 PCDHB8Q9UN66 801 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 PCDHB13Q9Y5F0 798 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 TLDC2A0PJX2 215 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 SH3BP5O60239 455 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 MARSP56192 900 aaKnown RBP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 EIF4A1P60842 406 aaKnown RBP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 HDLBPQ00341 1268 aaKnown RBP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 ZNF790Q6PG37 636 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 JAZF1Q86VZ6 243 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 HELBQ8NG08 1087 aaPredicted RBP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 AKT1S1Q96B36 256 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 GTF2F1P35269 517 aaKnown RBP eCLIP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 ATP6V1AP38606 617 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 IGBP1P78318 339 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 EXOSC9Q06265 439 aaKnown RBP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 RAD51AP2Q09MP3 1159 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 SLC15A2Q16348 729 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 KCNB2Q92953 911 aa6.49□□□□□ -1.37
VCAM1-202ENST00000347652 TFIP11Q9UBB9 837 aaKnown RBP6.49□□□□□ -1.37
VCAM1-202ENST00000347652 MYH14Q7Z406 1995 aaKnown RBP6.48□□□□□ -1.37
VCAM1-202ENST00000347652 KCPQ6ZWJ8 1503 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 HEG1Q9ULI3 1381 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 C4BP0C0L5 1744 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 PRAMEF22A3QJZ6 481 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 SLC27A3Q5K4L6 730 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 TMEM164Q5U3C3 297 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 C8orf58Q8NAV2 365 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 PIK3R5Q8WYR1 880 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 ZMIZ1Q9ULJ6 1067 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 TJP1Q07157 1748 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 ZBTB7AO95365 584 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 NBPF14Q5TI25 921 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 STAG1Q8WVM7 1258 aa6.48□□□□□ -1.37
VCAM1-202ENST00000347652 CASZ1Q86V15 1759 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 UBR2Q8IWV8 1755 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 GPR37L1O60883 481 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 CT47B1P0C2W7 299 aaPredicted RBP6.47□□□□□ -1.37
VCAM1-202ENST00000347652 APLP1P51693 650 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 MCCD1P59942 119 aaPredicted RBP6.47□□□□□ -1.37
VCAM1-202ENST00000347652 TTC5Q8N0Z6 440 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 EFCAB3Q8N7B9 438 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 TSPYL6Q8N831 410 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 SMARCC1Q92922 1105 aaPredicted RBP6.47□□□□□ -1.37
VCAM1-202ENST00000347652 STK32BQ9NY57 414 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 PNPLA7Q6ZV29 1317 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 VAMP4O75379 141 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 PHF14O94880 888 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 KRT24Q2M2I5 525 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 DNAJC10Q8IXB1 793 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 SMC5Q8IY18 1101 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 RPUSD2Q8IZ73 545 aaKnown RBP6.47□□□□□ -1.37
VCAM1-202ENST00000347652 ZNF496Q96IT1 587 aaPredicted RBP6.47□□□□□ -1.37
VCAM1-202ENST00000347652 FMNL2Q96PY5 1086 aa6.47□□□□□ -1.37
VCAM1-202ENST00000347652 TFCP2L1Q9NZI6 479 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms