RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 PIP4K2AP48426 406 aaPredicted RBP17.15■□□□□ 0.34
NUP50-201ENST00000347635 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
NUP50-201ENST00000347635 GPT2Q8TD30 523 aa17.15■□□□□ 0.34
NUP50-201ENST00000347635 METP08581 1390 aa17.15■□□□□ 0.34
NUP50-201ENST00000347635 ZSCAN12O43309 604 aa17.14■□□□□ 0.34
NUP50-201ENST00000347635 SETQ01105 290 aaPredicted RBP17.14■□□□□ 0.34
NUP50-201ENST00000347635 TMCO3Q6UWJ1 677 aa17.14■□□□□ 0.34
NUP50-201ENST00000347635 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
NUP50-201ENST00000347635 DNAJC25Q9H1X3 360 aa17.14■□□□□ 0.33
NUP50-201ENST00000347635 ZNF500O60304 480 aaPredicted RBP17.14■□□□□ 0.33
NUP50-201ENST00000347635 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
NUP50-201ENST00000347635 ATP7BP35670 1465 aa17.14■□□□□ 0.33
NUP50-201ENST00000347635 BRF1Q92994 677 aa17.14■□□□□ 0.33
NUP50-201ENST00000347635 PHAXQ9H814 394 aaKnown RBP17.14■□□□□ 0.33
NUP50-201ENST00000347635 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
NUP50-201ENST00000347635 CAVIN4Q5BKX8 364 aa17.14■□□□□ 0.33
NUP50-201ENST00000347635 KSR2Q6VAB6 950 aa17.14■□□□□ 0.33
NUP50-201ENST00000347635 CAGE1Q8TC20 777 aa17.14■□□□□ 0.33
NUP50-201ENST00000347635 IBTKQ9P2D0 1353 aaPredicted RBP17.13■□□□□ 0.33
NUP50-201ENST00000347635 PIBF1Q8WXW3 757 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 WASF1Q92558 559 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 CPA1P15085 419 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 PTGS1P23219 599 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 TMC6Q7Z403 805 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 RAD50Q92878 1312 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 ERICH4A6NGS2 130 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 GRM8O00222 908 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 RAD21O60216 631 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 CDC42BPBQ9Y5S2 1711 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 RIMBP3CA6NJZ7 1639 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 RIMBP3BA6NNM3 1639 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 RIMBP3Q9UFD9 1639 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 SGSM2O43147 1006 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 LEKR1Q6ZMV7 388 aa17.13■□□□□ 0.33
NUP50-201ENST00000347635 GOLIM4O00461 696 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 HSPA4P34932 840 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
NUP50-201ENST00000347635 CDC5LQ99459 802 aaKnown RBP17.12■□□□□ 0.33
NUP50-201ENST00000347635 RNMTO43148 476 aaKnown RBP17.12■□□□□ 0.33
NUP50-201ENST00000347635 EPB41L2O43491 1005 aaKnown RBP17.12■□□□□ 0.33
NUP50-201ENST00000347635 RUFY1Q96T51 708 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 ERLIN1O75477 346 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 HOXB7P09629 217 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 GOLGA8BA8MQT2 603 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 Q6ZUG5 572 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 CCDC150Q8NCX0 1101 aa17.12■□□□□ 0.33
NUP50-201ENST00000347635 TOP1P11387 765 aaKnown RBP17.11■□□□□ 0.33
NUP50-201ENST00000347635 SKILP12757 684 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 SLC5A1P13866 664 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 ZBTB3Q9H5J0 574 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 CLSTN1O94985 981 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 TXLNAP40222 546 aa17.11■□□□□ 0.33
NUP50-201ENST00000347635 LUZP1Q86V48 1076 aa17.1■□□□□ 0.33
NUP50-201ENST00000347635 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
NUP50-201ENST00000347635 URI1O94763 535 aaPredicted RBP17.1■□□□□ 0.33
NUP50-201ENST00000347635 MYRIPQ8NFW9 859 aa17.1■□□□□ 0.33
NUP50-201ENST00000347635 NUP133Q8WUM0 1156 aa17.1■□□□□ 0.33
NUP50-201ENST00000347635 BIN1O00499 593 aa17.1■□□□□ 0.33
NUP50-201ENST00000347635 PTCH1Q13635 1447 aa17.1■□□□□ 0.33
NUP50-201ENST00000347635 SIRT2Q8IXJ6 389 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 MAGEC2Q9UBF1 373 aaPredicted RBP17.09■□□□□ 0.33
NUP50-201ENST00000347635 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 EIF3JO75822 258 aaKnown RBP17.09■□□□□ 0.33
NUP50-201ENST00000347635 CASQ1P31415 396 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 RFC4P35249 363 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
NUP50-201ENST00000347635 LRP2BPQ9P2M1 347 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 IDH1O75874 414 aaKnown RBP17.09■□□□□ 0.33
NUP50-201ENST00000347635 MCMDC2Q4G0Z9 681 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 DDX46Q7L014 1031 aaKnown RBP17.09■□□□□ 0.33
NUP50-201ENST00000347635 LRRC2Q9BYS8 371 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 E9PCH4 1651 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 A2ML1A8K2U0 1454 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 ZNF213O14771 459 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
NUP50-201ENST00000347635 PALD1Q9ULE6 856 aa17.08■□□□□ 0.33
NUP50-201ENST00000347635 CEP131Q9UPN4 1083 aa17.08■□□□□ 0.33
NUP50-201ENST00000347635 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
NUP50-201ENST00000347635 AIDAQ96BJ3 306 aa17.08■□□□□ 0.32
NUP50-201ENST00000347635 CCDC85AQ96PX6 553 aaPredicted RBP17.08■□□□□ 0.32
NUP50-201ENST00000347635 POLR3DP05423 398 aaPredicted RBP17.08■□□□□ 0.32
NUP50-201ENST00000347635 PPFIA3O75145 1194 aa17.08■□□□□ 0.32
NUP50-201ENST00000347635 ZNF853P0CG23 659 aa17.08■□□□□ 0.32
NUP50-201ENST00000347635 NAP1L1P55209 391 aaKnown RBP17.08■□□□□ 0.32
NUP50-201ENST00000347635 RAI14Q9P0K7 980 aa17.08■□□□□ 0.32
NUP50-201ENST00000347635 ABCA6Q8N139 1617 aa17.08■□□□□ 0.32
NUP50-201ENST00000347635 LINS1Q8NG48 757 aa17.07■□□□□ 0.32
NUP50-201ENST00000347635 SMAP1Q8IYB5 467 aaPredicted RBP17.07■□□□□ 0.32
NUP50-201ENST00000347635 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
NUP50-201ENST00000347635 RGS12O14924 1447 aa17.07■□□□□ 0.32
NUP50-201ENST00000347635 CWF19L2Q2TBE0 894 aaKnown RBP17.07■□□□□ 0.32
NUP50-201ENST00000347635 NFATC2IPQ8NCF5 419 aa17.07■□□□□ 0.32
NUP50-201ENST00000347635 XAGE3Q8WTP9 111 aa17.07■□□□□ 0.32
NUP50-201ENST00000347635 MRPS27Q92552 414 aaKnown RBP17.07■□□□□ 0.32
NUP50-201ENST00000347635 TDO2P48775 406 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms