RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 UBAP1LF5GYI3 381 aa18.82■□□□□ 0.6
HMGA1-202ENST00000347617 SGSM2O43147 1006 aa18.82■□□□□ 0.6
HMGA1-202ENST00000347617 TEX13AQ9BXU3 409 aaPredicted RBP18.82■□□□□ 0.6
HMGA1-202ENST00000347617 GLI3P10071 1580 aa18.82■□□□□ 0.6
HMGA1-202ENST00000347617 NRAPQ86VF7 1730 aa18.82■□□□□ 0.6
HMGA1-202ENST00000347617 UTYO14607 1347 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 SPATA31A1Q5TZJ5 1347 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 CAVIN2O95810 425 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 ANXA1P04083 346 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 TM6SF1Q9BZW5 370 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 SNX14Q9Y5W7 946 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 SLIT2O94813 1529 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 KCPQ6ZWJ8 1503 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 PIP4K2BP78356 416 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 SSH3Q8TE77 659 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 PYCARDQ9ULZ3 195 aa18.81■□□□□ 0.6
HMGA1-202ENST00000347617 WNK3Q9BYP7 1800 aa18.8■□□□□ 0.6
HMGA1-202ENST00000347617 BARGINQ6ZT62 677 aa18.8■□□□□ 0.6
HMGA1-202ENST00000347617 TSC1Q92574 1164 aa18.8■□□□□ 0.6
HMGA1-202ENST00000347617 AK2P54819 239 aa18.79■□□□□ 0.6
HMGA1-202ENST00000347617 MTX1Q13505 466 aa18.79■□□□□ 0.6
HMGA1-202ENST00000347617 MAP3K11Q16584 847 aa18.79■□□□□ 0.6
HMGA1-202ENST00000347617 VPS53Q5VIR6 699 aa18.79■□□□□ 0.6
HMGA1-202ENST00000347617 CNTROBQ8N137 903 aa18.79■□□□□ 0.6
HMGA1-202ENST00000347617 C17orf53Q8N3J3 647 aaPredicted RBP18.79■□□□□ 0.6
HMGA1-202ENST00000347617 LRRFIP2Q9Y608 721 aaKnown RBP18.79■□□□□ 0.6
HMGA1-202ENST00000347617 JCADQ9P266 1359 aa18.79■□□□□ 0.6
HMGA1-202ENST00000347617 FIBPO43427 364 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 POLA2Q14181 598 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 CREBRFQ8IUR6 639 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 RUFY2Q8WXA3 655 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 ADAMTS2O95450 1211 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 NEXNQ0ZGT2 675 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 ANKRD13DQ6ZTN6 518 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 COPS6Q7L5N1 327 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 RIC3Q7Z5B4 369 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 METTL22Q9BUU2 404 aaPredicted RBP18.78■□□□□ 0.6
HMGA1-202ENST00000347617 LSG1Q9H089 658 aaKnown RBP18.78■□□□□ 0.6
HMGA1-202ENST00000347617 MTMR6Q9Y217 621 aa18.78■□□□□ 0.6
HMGA1-202ENST00000347617 TOGARAM1Q9Y4F4 1720 aa18.77■□□□□ 0.6
HMGA1-202ENST00000347617 NEMFO60524 1076 aa18.77■□□□□ 0.6
HMGA1-202ENST00000347617 PDCP20941 246 aa18.77■□□□□ 0.6
HMGA1-202ENST00000347617 CDC25BP30305 580 aa18.77■□□□□ 0.6
HMGA1-202ENST00000347617 FOXD4L6Q3SYB3 417 aaPredicted RBP18.77■□□□□ 0.6
HMGA1-202ENST00000347617 FOXD4L3Q6VB84 417 aaPredicted RBP18.77■□□□□ 0.6
HMGA1-202ENST00000347617 RUFY3Q7L099 469 aa18.77■□□□□ 0.6
HMGA1-202ENST00000347617 XAGE3Q8WTP9 111 aa18.77■□□□□ 0.6
HMGA1-202ENST00000347617 NUP62CLQ9H1M0 184 aa18.77■□□□□ 0.6
HMGA1-202ENST00000347617 USP42Q9H9J4 1324 aaKnown RBP18.77■□□□□ 0.59
HMGA1-202ENST00000347617 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
HMGA1-202ENST00000347617 KRT85P78386 507 aa18.76■□□□□ 0.59
HMGA1-202ENST00000347617 PLCB2Q00722 1185 aa18.76■□□□□ 0.59
HMGA1-202ENST00000347617 HSP90AB4PQ58FF6 505 aa18.76■□□□□ 0.59
HMGA1-202ENST00000347617 KCNB2Q92953 911 aa18.76■□□□□ 0.59
HMGA1-202ENST00000347617 DDX19AQ9NUU7 478 aaKnown RBP18.76■□□□□ 0.59
HMGA1-202ENST00000347617 NCBP1Q09161 790 aaKnown RBP18.76■□□□□ 0.59
HMGA1-202ENST00000347617 PLBD2Q8NHP8 589 aa18.76■□□□□ 0.59
HMGA1-202ENST00000347617 PIGBQ92521 554 aa18.76■□□□□ 0.59
HMGA1-202ENST00000347617 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
HMGA1-202ENST00000347617 C9orf78Q9NZ63 289 aaPredicted RBP18.76■□□□□ 0.59
HMGA1-202ENST00000347617 BCL9O00512 1426 aa18.75■□□□□ 0.59
HMGA1-202ENST00000347617 PNMA6EA0A0J9YXQ4 647 aa18.75■□□□□ 0.59
HMGA1-202ENST00000347617 AP5Z1O43299 807 aa18.75■□□□□ 0.59
HMGA1-202ENST00000347617 MYL6BP14649 208 aa18.75■□□□□ 0.59
HMGA1-202ENST00000347617 U2AF2P26368 475 aaKnown RBP eCLIP18.75■□□□□ 0.59
HMGA1-202ENST00000347617 MPNDQ8N594 471 aa18.75■□□□□ 0.59
HMGA1-202ENST00000347617 CTNNA3Q9UI47 895 aa18.75■□□□□ 0.59
HMGA1-202ENST00000347617 SPATA31A6Q5VVP1 1343 aa18.75■□□□□ 0.59
HMGA1-202ENST00000347617 COL15A1P39059 1388 aa18.74■□□□□ 0.59
HMGA1-202ENST00000347617 GRM8O00222 908 aa18.74■□□□□ 0.59
HMGA1-202ENST00000347617 GJB2P29033 226 aa18.74■□□□□ 0.59
HMGA1-202ENST00000347617 TYRO3Q06418 890 aa18.74■□□□□ 0.59
HMGA1-202ENST00000347617 AIMP1Q12904 312 aaKnown RBP18.74■□□□□ 0.59
HMGA1-202ENST00000347617 TSHZ3Q63HK5 1081 aa18.74■□□□□ 0.59
HMGA1-202ENST00000347617 RBM43Q6ZSC3 357 aaKnown RBP18.74■□□□□ 0.59
HMGA1-202ENST00000347617 UNC5CLQ8IV45 518 aa18.74■□□□□ 0.59
HMGA1-202ENST00000347617 TDRD7Q8NHU6 1098 aaKnown RBP18.74■□□□□ 0.59
HMGA1-202ENST00000347617 MORC2Q9Y6X9 1032 aaPredicted RBP18.74■□□□□ 0.59
HMGA1-202ENST00000347617 TTC41PQ6P2S7 1318 aa18.74■□□□□ 0.59
HMGA1-202ENST00000347617 CCDC112Q8NEF3 446 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 KIF1BPQ96EK5 621 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 SCAND2PQ9GZW5 306 aaPredicted RBP18.73■□□□□ 0.59
HMGA1-202ENST00000347617 DDX41Q9UJV9 622 aaKnown RBP18.73■□□□□ 0.59
HMGA1-202ENST00000347617 ITGB4P16144 1822 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 NEURL1BA8MQ27 555 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 IGKV5-2P06315 115 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 DNM1Q05193 864 aaKnown RBP18.73■□□□□ 0.59
HMGA1-202ENST00000347617 DDB1Q16531 1140 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 PPP1R42Q7Z4L9 355 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 PLA2G4DQ86XP0 818 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 SPC24Q8NBT2 197 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 PI4K2BQ8TCG2 481 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 ATG3Q9NT62 314 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 CYP46A1Q9Y6A2 500 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
HMGA1-202ENST00000347617 SPDYE4A6NLX3 237 aa18.72■□□□□ 0.59
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