RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NUP98P52948 1817 aa17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CDHR2Q9BYE9 1310 aa17.04■□□□□ 0.32
CDK5RAP1-202ENST00000346416 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 FAM98CQ17RN3 349 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 HAUS7Q99871 368 aa17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CWC22Q9HCG8 908 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 SNRKQ9NRH2 765 aa17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 ANKRD36CQ5JPF3 1778 aa17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CCDC171Q6TFL3 1326 aa17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 INTS5Q6P9B9 1019 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CCDC87Q9NVE4 849 aa17.03■□□□□ 0.32
CDK5RAP1-202ENST00000346416 SSFA2P28290 1259 aa17.02■□□□□ 0.32
CDK5RAP1-202ENST00000346416 CRKLP46109 303 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP1-202ENST00000346416 IFIT5Q13325 482 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP1-202ENST00000346416 IL27Q8NEV9 243 aa17.02■□□□□ 0.32
CDK5RAP1-202ENST00000346416 JCADQ9P266 1359 aa17.02■□□□□ 0.32
CDK5RAP1-202ENST00000346416 BCL9LQ86UU0 1499 aa17.02■□□□□ 0.31
CDK5RAP1-202ENST00000346416 KCNQ2O43526 872 aa17.02■□□□□ 0.31
CDK5RAP1-202ENST00000346416 NOL8Q76FK4 1167 aaKnown RBP17.02■□□□□ 0.31
CDK5RAP1-202ENST00000346416 GBP4Q96PP9 640 aa17.02■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CEP126Q9P2H0 1117 aa17.02■□□□□ 0.31
CDK5RAP1-202ENST00000346416 TRMT112Q9UI30 125 aaKnown RBP17.02■□□□□ 0.31
CDK5RAP1-202ENST00000346416 FBXO3Q9UK99 471 aa17.02■□□□□ 0.31
CDK5RAP1-202ENST00000346416 PALLDQ8WX93 1383 aa17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ZNF609O15014 1411 aa17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 A0A1B0GUL7 405 aa17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ITPK1Q13572 414 aa17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 VPS72Q15906 364 aa17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 MAP4K1Q92918 833 aa17.01■□□□□ 0.31
CDK5RAP1-202ENST00000346416 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 NUCB2P80303 420 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 NECTIN1Q15223 517 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 TTLL11Q8NHH1 800 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 MED23Q9ULK4 1368 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 IRS4O14654 1257 aaPredicted RBP17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CUL4AQ13619 759 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ZNF34Q8IZ26 560 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 KCNB2Q92953 911 aa17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 RBM8AQ9Y5S9 174 aaKnown RBP17■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CTSWP56202 376 aa16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ZNF589Q86UQ0 364 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 GREM2Q9H772 168 aa16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 RFX7Q2KHR2 1363 aa16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ITGA6P23229 1130 aa16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 KCNJ4P48050 445 aa16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 PKP1Q13835 747 aa16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 SMARCC1Q92922 1105 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 TTC14Q96N46 770 aa16.99■□□□□ 0.31
CDK5RAP1-202ENST00000346416 MYH14Q7Z406 1995 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CYP2E1P05181 493 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CASTP20810 708 aaKnown RBP16.98■□□□□ 0.31
CDK5RAP1-202ENST00000346416 KBTBD3Q8NAB2 608 aa16.98■□□□□ 0.31
CDK5RAP1-202ENST00000346416 AKAP2Q9Y2D5 859 aa16.98■□□□□ 0.31
CDK5RAP1-202ENST00000346416 MYH3P11055 1940 aa16.98■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ZKSCAN1P17029 563 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ADCK5Q3MIX3 580 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CREB3L3Q68CJ9 461 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 FNBP4Q8N3X1 1017 aaPredicted RBP16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 INTS4Q96HW7 963 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 GOLIM4O00461 696 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 TRAK2O60296 914 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 PDE8AO60658 829 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CHGBP05060 677 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CLEC17AQ6ZS10 378 aa16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP1-202ENST00000346416 ANKRD18BA2A2Z9 1011 aa16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 TAF5LO75529 589 aa16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CPA1P15085 419 aa16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 AK2P54819 239 aa16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 TM6SF1Q9BZW5 370 aa16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 RREB1Q92766 1687 aa16.96■□□□□ 0.31
CDK5RAP1-202ENST00000346416 CAMTA2O94983 1202 aa16.96■□□□□ 0.3
CDK5RAP1-202ENST00000346416 IFIT1P09914 478 aaKnown RBP16.96■□□□□ 0.3
CDK5RAP1-202ENST00000346416 RIPOR2Q9Y4F9 1068 aa16.96■□□□□ 0.3
CDK5RAP1-202ENST00000346416 SLC27A2O14975 620 aa16.95■□□□□ 0.3
CDK5RAP1-202ENST00000346416 XAGE2Q96GT9 111 aa16.95■□□□□ 0.3
CDK5RAP1-202ENST00000346416 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
CDK5RAP1-202ENST00000346416 BAG4O95429 457 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 ADORA1P30542 326 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 MCMDC2Q4G0Z9 681 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 CCDC158Q5M9N0 1113 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 GORABQ5T7V8 394 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 RNF20Q5VTR2 975 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 SUSD4Q5VX71 490 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 SEC62Q99442 399 aaKnown RBP16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 CYP46A1Q9Y6A2 500 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 METTL24Q5JXM2 366 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 RUFY3Q7L099 469 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 USP21Q9UK80 565 aa16.94■□□□□ 0.3
CDK5RAP1-202ENST00000346416 LIMCH1Q9UPQ0 1083 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms