RNA–Protein interactions for RNA: ENST00000344785.10

RBM38-202, Transcript of RNA binding motif protein 38, humanhuman

TSL 5

Gene RBM38, Length 2,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-202ENST00000344785 HIP1O00291 1037 aa22.32■■□□□ 1.16
RBM38-202ENST00000344785 PCCAP05165 728 aaPredicted RBP22.32■■□□□ 1.16
RBM38-202ENST00000344785 IL15P40933 162 aaPredicted RBP22.32■■□□□ 1.16
RBM38-202ENST00000344785 SLFNL1Q499Z3 407 aa22.32■■□□□ 1.16
RBM38-202ENST00000344785 MARCH10Q8NA82 808 aaPredicted RBP22.32■■□□□ 1.16
RBM38-202ENST00000344785 ACSBG1Q96GR2 724 aa22.32■■□□□ 1.16
RBM38-202ENST00000344785 HAUS7Q99871 368 aa22.32■■□□□ 1.16
RBM38-202ENST00000344785 LRP6O75581 1613 aa22.32■■□□□ 1.16
RBM38-202ENST00000344785 PIP4K2BP78356 416 aa22.31■■□□□ 1.16
RBM38-202ENST00000344785 CREB3L3Q68CJ9 461 aa22.31■■□□□ 1.16
RBM38-202ENST00000344785 DDX46Q7L014 1031 aaKnown RBP22.31■■□□□ 1.16
RBM38-202ENST00000344785 SEC62Q99442 399 aaKnown RBP22.31■■□□□ 1.16
RBM38-202ENST00000344785 BRPF3Q9ULD4 1205 aa22.31■■□□□ 1.16
RBM38-202ENST00000344785 WNK3Q9BYP7 1800 aa22.31■■□□□ 1.16
RBM38-202ENST00000344785 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
RBM38-202ENST00000344785 NLRP10Q86W26 655 aa22.31■■□□□ 1.16
RBM38-202ENST00000344785 ZBTB38Q8NAP3 1195 aaPredicted RBP22.31■■□□□ 1.16
RBM38-202ENST00000344785 INTS4Q96HW7 963 aaKnown RBP22.31■■□□□ 1.16
RBM38-202ENST00000344785 JAKMIP1Q96N16 626 aaKnown RBP22.31■■□□□ 1.16
RBM38-202ENST00000344785 DTNBO60941 627 aa22.3■■□□□ 1.16
RBM38-202ENST00000344785 MCTP1Q6DN14 999 aa22.3■■□□□ 1.16
RBM38-202ENST00000344785 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
RBM38-202ENST00000344785 LARGE1O95461 756 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 CSF1RP07333 972 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 DDB1Q16531 1140 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 ZSWIM6Q9HCJ5 1215 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 NRAPQ86VF7 1730 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 DOT1LQ8TEK3 1739 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 SLC27A2O14975 620 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 TAF5LO75529 589 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 CCDC129Q6ZRS4 1044 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 ZNF609O15014 1411 aa22.29■■□□□ 1.16
RBM38-202ENST00000344785 FSD2A1L4K1 749 aa22.28■■□□□ 1.16
RBM38-202ENST00000344785 GPR108Q9NPR9 543 aa22.28■■□□□ 1.16
RBM38-202ENST00000344785 A0A1B0GUL7 405 aa22.28■■□□□ 1.16
RBM38-202ENST00000344785 CIAO1O76071 339 aa22.28■■□□□ 1.16
RBM38-202ENST00000344785 CCDC57Q2TAC2 916 aa22.28■■□□□ 1.16
RBM38-202ENST00000344785 PLA2G12BQ9BX93 195 aa22.28■■□□□ 1.16
RBM38-202ENST00000344785 A0A0G2JS52 829 aa22.27■■□□□ 1.16
RBM38-202ENST00000344785 JCADQ9P266 1359 aa22.26■■□□□ 1.15
RBM38-202ENST00000344785 SPATA31A5Q5VU36 1347 aa22.26■■□□□ 1.15
RBM38-202ENST00000344785 SPATA31A7Q8IWB4 1347 aa22.26■■□□□ 1.15
RBM38-202ENST00000344785 BRD1O95696 1058 aa22.26■■□□□ 1.15
RBM38-202ENST00000344785 LMBRD1Q9NUN5 540 aa22.26■■□□□ 1.15
RBM38-202ENST00000344785 TM6SF1Q9BZW5 370 aa22.26■■□□□ 1.15
RBM38-202ENST00000344785 LIMCH1Q9UPQ0 1083 aa22.26■■□□□ 1.15
RBM38-202ENST00000344785 GOLIM4O00461 696 aa22.25■■□□□ 1.15
RBM38-202ENST00000344785 ADORA1P30542 326 aa22.25■■□□□ 1.15
RBM38-202ENST00000344785 KCNJ4P48050 445 aa22.25■■□□□ 1.15
RBM38-202ENST00000344785 INTS5Q6P9B9 1019 aaKnown RBP22.25■■□□□ 1.15
RBM38-202ENST00000344785 THRAP3Q9Y2W1 955 aaKnown RBP22.25■■□□□ 1.15
RBM38-202ENST00000344785 UBN2Q6ZU65 1347 aa22.25■■□□□ 1.15
RBM38-202ENST00000344785 KBTBD3Q8NAB2 608 aa22.25■■□□□ 1.15
RBM38-202ENST00000344785 TTLL11Q8NHH1 800 aa22.25■■□□□ 1.15
RBM38-202ENST00000344785 CDCA7Q9BWT1 371 aaPredicted RBP22.25■■□□□ 1.15
RBM38-202ENST00000344785 PDRG1Q9NUG6 133 aa22.25■■□□□ 1.15
RBM38-202ENST00000344785 RPAP1Q9BWH6 1393 aaPredicted RBP22.24■■□□□ 1.15
RBM38-202ENST00000344785 DZIP3Q86Y13 1208 aaKnown RBP22.24■■□□□ 1.15
RBM38-202ENST00000344785 GREM2Q9H772 168 aa22.24■■□□□ 1.15
RBM38-202ENST00000344785 IL6STP40189 918 aaPredicted RBP22.23■■□□□ 1.15
RBM38-202ENST00000344785 ST3GAL1Q11201 340 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 VPS53Q5VIR6 699 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 TCEANC2Q96MN5 208 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 CEP126Q9P2H0 1117 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 SLIT2O94813 1529 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 ZKSCAN1P17029 563 aaPredicted RBP22.23■■□□□ 1.15
RBM38-202ENST00000344785 IL27Q8NEV9 243 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 PAG1Q9NWQ8 432 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 CYP46A1Q9Y6A2 500 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 CDHR2Q9BYE9 1310 aa22.23■■□□□ 1.15
RBM38-202ENST00000344785 KCNQ2O43526 872 aa22.22■■□□□ 1.15
RBM38-202ENST00000344785 ITPK1Q13572 414 aa22.22■■□□□ 1.15
RBM38-202ENST00000344785 USPL1Q5W0Q7 1092 aa22.22■■□□□ 1.15
RBM38-202ENST00000344785 GAS2L3Q86XJ1 694 aa22.22■■□□□ 1.15
RBM38-202ENST00000344785 EIF5P55010 431 aaKnown RBP22.22■■□□□ 1.15
RBM38-202ENST00000344785 IFIT5Q13325 482 aaKnown RBP22.22■■□□□ 1.15
RBM38-202ENST00000344785 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
RBM38-202ENST00000344785 NUP98P52948 1817 aa22.21■■□□□ 1.15
RBM38-202ENST00000344785 GOLGA6L22H0YM25 854 aa22.21■■□□□ 1.15
RBM38-202ENST00000344785 XRCC6P12956 609 aaKnown RBP eCLIP22.21■■□□□ 1.158e-6■□□□□ 10.2
RBM38-202ENST00000344785 TRMT112Q9UI30 125 aaKnown RBP22.21■■□□□ 1.15
RBM38-202ENST00000344785 IRS4O14654 1257 aaPredicted RBP22.21■■□□□ 1.15
RBM38-202ENST00000344785 PRPF40AO75400 957 aaKnown RBP22.21■■□□□ 1.15
RBM38-202ENST00000344785 ITGA6P23229 1130 aa22.21■■□□□ 1.15
RBM38-202ENST00000344785 ATP6V1AP38606 617 aa22.21■■□□□ 1.15
RBM38-202ENST00000344785 MCMDC2Q4G0Z9 681 aa22.21■■□□□ 1.15
RBM38-202ENST00000344785 ZNF34Q8IZ26 560 aa22.21■■□□□ 1.15
RBM38-202ENST00000344785 RIPOR2Q9Y4F9 1068 aa22.21■■□□□ 1.15
RBM38-202ENST00000344785 DDX49Q9Y6V7 483 aaKnown RBP22.21■■□□□ 1.15
RBM38-202ENST00000344785 GOLGA6L3A6NEY3 463 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 ERVV-1B6SEH8 477 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 IFIT1P09914 478 aaKnown RBP22.2■■□□□ 1.14
RBM38-202ENST00000344785 SCARF1Q14162 830 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 ME3Q16798 604 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 HSP90AB3PQ58FF7 597 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 XAGE2Q96GT9 111 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 TPCN1Q9ULQ1 816 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 RFX7Q2KHR2 1363 aa22.2■■□□□ 1.14
RBM38-202ENST00000344785 LOC102724428A0A0B4J2F2 783 aa22.19■■□□□ 1.14
RBM38-202ENST00000344785 CRKLP46109 303 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms